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Species:

Ananas comosus (TPB 2016)

EST ID:

Ac7343 (View in GBrowse)

Function:

Similar to Uncharacterized protein C6orf106 homolog OS=Danio rerio GN=zgc:101577 PE=2 SV=1

Full Length Predict:

Start Codon Status:

Strand and Stop Status:

Full-length

Yes

sense complete

Domain Search E-Value:

Domain / Pfam ID:

-

-

Frame:

Start:

End:

1

1768

2763

PEP:

>Ac7343 MGNKDDYTRMDKPSPFPHKMFNHHPKSRCVSLGFTTRPTREKLEGRFIKDVAVHDGTMMAPNTKFTKIWRMRNNGTTPWPYGTRIVWVGGDRIAS QDRVQLEIPTNGFAVDREIDIAVDFIAPPLPGRYISYWRLAAPLGQKFGQRVWVLIQVESPSPPTSGSKLSLNLNLPPAGSSSSVIEMMGTNVET KDEAHPQPNVTNTDEELIKPLVDDGPVIITDEPVEPPIAVVPPVQYPAVDFPTSAPPLPPPSPLLQAFNHDDSVEEVMLKELEEMGFKQIDLNKE VLRQNKYDLDQSVGDLCGFSEWDPLLIELEEMVSSCFSRLILPRLLW

Sequence:

>Ac7343 atctcttacccctcctagggttagggttaggttttagggttgcggctcacgggtacgcactaacgaacgaacgctggctcgtcagatcaagccgt gcttcttcggctcctcctcctcctcctcccccatggactacccggcgatcaacccccaggtcttcgaccgcgaggtcgttatcaaggtaaagtac ggcaatattctcaagcggttcaatactcgtgtttatgggcagtacttggattatgacataacaagacttaggatgaagatcatcaatgtctttaa gctgagcccagatgctgagctcactcttacctacacagacgaagacaatgacatcgtcacgttggacgatgatgatgatctgcatgctgccgtta aacagcaattgaaccctatcaggatcactgctcaaatgaaatgcgatgcttctgctgatgctgaactgacacctcagtctgcaaaccccacccca aggtctccgaattccaacttcgatcctgctcagttaggctcagctgtagaagaagcactgaagagtctcccagagcacgttcggactaaattttc aaagttatctcaggacatcttttcaaaagctgtagcttctgcaccgccattagctgaaactctgcagttcctgtcaaagttggagtttttaaatg acactcggccttcgaatggctcagtgggccaatcatctgttaatgtgaatgcaagtaatgagcagaaagataacccagttccagaacgctcagat aagcagcccaaaacagatcatactcctcttgaagtcaggactgaagctcctcaaaatcacagcgcagctggatttagccctatcgacgatgtgtt gccgtacctcttgacaaaaaacaatgatgagaagaagaatgttagcaaagttcatcatagtccttattctgattcattaattgttgagcctttag ggtgtcatgaggttccaaagatgccaactttccctcattatggagttggaacggatgctgtgggcaatgagacaattaaacagaaagccttaggc acattattgccttcgaccttcggtgatggtttcattcgcaatgatgtcccttcctttcatgggtggccccttggtgcaccttcgaatgcagttcc tcttccaggttttggctattcccatttcgagcacccttacaggccttacataggtgatggctatcctgaaagtatgctccatactttccataggg gagtccaatgtgatggttgtgggatgaatcccatctctggcccacgctacaagtctaaggtgtaagtgcccatgatgcatctgcttcgctttatt tgagctgaatttgtagtcagttgctatattgtatagctatcatctgcaatcccctaattgttttgttttccaactaagtcaccatagttcaacac gttaccaatttcatcccattttgttaaatgatctgcttatggcgtgatcttatgtgtgatccttattaggctaaaagggatggatatggatatgt ctttgaacttttggggatttaatcgattgaaaaaagaaaaatttagtgaccttattgacattgtataatattagagggactaactgattggttca ttttagatattagagggactaactgattggttcattttagtccaggttgttaaagcgtacccagtcaaatttgtgatgcatgatttattccaact ttgcttctactctgcaggaaagacaactatgatttgtgcagtatttgtttctctcggatgggcaacaaagatgattatacaagaatggacaagcc ttctccctttcctcacaaaatgtttaatcatcacccaaagtcccgctgtgtttcactaggtttcacgacgaggccaactcgagaaaaacttgaag gccgcttcattaaggacgtggctgtccatgatggaactatgatggcccctaacactaaatttacgaagatttggcggatgcgtaacaatgggacc acaccttggccctatggtactcggattgtgtgggtcggtggagatcgcattgcttcccaagatagggttcagctagagattccgacaaacggatt tgcagtggacagagaaattgatattgcagttgattttatcgctccaccactccctgggaggtacatatcttactggagattggctgctcctcttg ggcagaagtttggtcagcgagtttgggttcttatccaggtggagagccccagtcccccgaccagcggcagcaaactgagtttgaacttaaacctt cctcccgcaggcagcagcagttctgttatagaaatgatgggcaccaacgtcgagaccaaggacgaagctcaccctcaacccaatgtgaccaacac tgacgaggaattaatcaagcctctggtcgatgacggcccagttattataactgatgagcctgtggagccgccgattgcggtcgtccctccagtgc aatatcctgccgtcgatttcccgacgtccgcaccgccgctgcccccgccgtcgccgctgctgcaggcattcaaccacgacgactctgtggaggag gtgatgctgaaggagttggaggagatgggctttaagcagatcgacttgaacaaggaggtcctcaggcagaacaagtacgacctggaccagtccgt gggcgacctctgcgggttctcggagtgggacccccttctcattgagctggaggagatggtaagttcttgcttttcacgattaattttaccgcgtt tactctggtaagatcgactgcggtgggcacgcaggattaatttggttcgcgtgggttttcgcagggtttcgccgacaaggagaggaacaagaaga tgctggagaagaacggcgggagcatcaagcgcgccgtgatggacctcgtcgccgaggagaagaaacccatctaagttgtcgtctttatctataaa tacataaagttatggtgatataaataaattaggatcgtatatgtattcaaa

Alignment:

View alignment

Alternative Splices:

Genome ID:

EST ID 1:

EST ID 2:

Start:

Stop:

Strand:

AS Code:

AS Type:

LG20

Ac7343

c90501_g3_i5

1052771

1052873

+

1^2-,0

intron retention

LG20

Ac673

Ac7343

1049674

1050139

+

1^4-,2^3-

complex events

CDS / EST BLASTN:

Gene

e-Value

Identity

G Start

G End

E Start

E End

Aco013530.1 (View in GBrowse)

0.0

99

128

1297

1

1170