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Species:

Ananas comosus (TPB 2016)

EST ID:

Ac2131 (View in GBrowse)

Function:

Similar to Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1

Full Length Predict:

Start Codon Status:

Strand and Stop Status:

Full-length

Yes

sense complete

Domain Search E-Value:

Domain / Pfam ID:

-

-

Frame:

Start:

End:

3

93

767

PEP:

>Ac2131 MEREKTNFSITCSLLSKFMKEKGSIIGGLGLEIMGPKPLQQQANNGIDSQLATMNLLDGVNASVEEHIKNAGEQHESAENPHFNGSEKAQLTIFY GGEVLVFDDFSAGKVEELMRMAKETSSSVQNFRIAVPQFAASPTDHKLKSSSQNTAVPRPAQAIASDIPLVRRNSLHRFLAKRRERINTKAPYQL NYSLEAKNAAKTEDNNKSWLGLGSGVIGSEHELRL

Sequence:

>Ac2131 ctttcactatataagaaaacaagaggctaaggtagggaaagaacacaaagtctcaaaaaacaacttagaaaaagagagagagggagaaggagatg gagagggaaaaaaccaacttctctataacttgtagcctcttaagcaagtttatgaaggaaaaaggaagcattattggtgggttggggcttgagat tatgggccctaaacctcttcaacaacaagctaataatggaatagattctcagcttgctaccatgaacttattagatggagttaatgcatcagtag aagaacatatcaaaaatgctggtgaacaacatgaaagtgccgagaatccgcattttaatggttcagagaaagcgcagctgacgatattttacggc ggagaagtgctggttttcgacgatttttccgccggtaaggtcgaggaattgatgcgaatggcgaaggagacgtcgtcgtcggtgcaaaatttccg catcgcggttcctcaattcgccgcttctccaactgatcataaactcaaatccagctcccaaaatactgctgtgcctaggcctgctcaagccattg cttctgatatacctctggtaagaagaaattcgctgcatcgattcctcgcgaaaaggagggaaaggattaacaccaaggcgccttaccaactaaat tactctttggaggccaagaacgcggctaagacggaggataataataagtcgtggctcggcttaggttcaggagtcattggatccgaacatgagct tcgtttgtagaagatcggagtgatggatcaaacattttacgaagtatgttaagcatatatagtggcctctttgtttaaacacaatgttgtttctt ttttgcctccccaaatgaggtttgagatgtaaatttgtattttagcaaagaggtggattaattcaaagaatatatatgatatgtttgatttgaaa atgattcatcttatcttatagatagttgtttagcgaaatttttatttttatttcattgtattagctaattaaatttggttgctatgatgaacaat tg

Alignment:

View alignment

Alternative Splices:

Genome ID:

EST ID 1:

EST ID 2:

Start:

Stop:

Strand:

AS Code:

AS Type:

LG20

Ac2131

c78727_g1_i4

8890791

8890893

+

1^2-,0

intron retention

LG20

Ac2131

DT338260

8891661

8891768

+

1^2-,0

intron retention

CDS / EST BLASTN:

Gene

e-Value

Identity

G Start

G End

E Start

E End

Aco023684.1 (View in GBrowse)

0.0

100

93

770

1

678