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Species:

Ananas comosus (TPB 2016)

EST ID:

c89242_g2_i5 (View in GBrowse)

Function:

-

Full Length Predict:

Start Codon Status:

Strand and Stop Status:

-

-

-

Domain Search E-Value:

Domain / Pfam ID:

-

-

Frame:

Start:

End:

-1

742

3918

PEP:

>c89242_g2_i5 MAGSGRAELASNNPDGSAFTYPNGQRGVYSGSNLDRSGSFREGSESRVQVSGAGTSRNSASAVEIPPVSQYLSLEPLSTGEQKYPRSVELRRVLG VNVDEHSFGSVQSKPLPLIAFEDVKRFKTSIEGSSTRAKERIKFLHESMQKLDKYRNLVSRKRQKSDLSAEKFGSSNLLKMGTQTSQNPTESLSL RLEDRAKNVAPNKRFRSSVAEPEGRGPVSIRQSTVVDKEKVLLFDKDNKTMLRTCNGGPVVSEDKLRVLSPGGEVLDKKMRRKRSVGTMVNRSSD ADREVKQAVQHRSNNDIRPRSSDNLSFRPGSSSGVIGSTKMDGSSQQSGAASRVMPKNDVDNGPASNERRERATGLDKERLLAKGNKQNICEDAQ VGSQSPLTKGKASRAPRTGPTIIGNSSSTFPRSFGGIDGWDQSVPAPNKIQPLPGMPHHKRPVSSGPSSPPVTQWVRQRQHKISRQRRANIIPPL PNFDEAPTTFSEGFVPPDVGTRSASMEPSGHLPTRGIAGSSQQLKLKTDSVSPPLGLSESEESVAVENKFKDKVIVDHGDIEEGPASVLKVTTSI VPTKKSKVNLKEEIGDGVRRQGRSGRGSMQSKACLPLSKEKLETVDNTKPLKSGRLGSDKIESRVGRPPSKKASDRKAGARPVQTIQSGSSDLTG ESDDDREELLAAANAARKASSDACSSSFWRTMEPIFTRVTSKDTDFVMTQMEFVKELDRSMFDVLDADHRVMDDHPFQSSPRSSGQNKMNASGKV GKDQWLEKIVPLSQRLLSALITEDENELFDCNSEEDDGFEQFSSDYSPYASNSHVGNEHGAHDMKSDFGLDFRNPNSHSMGNVLPNVFTTSSNFR SSNIHTLGTGDDLVQAQSNVSVPSENGPLSEYGPTISTQLNTSPQNSLFEHMSLNDRILLELQSIGLHQETAPELDQGELGEIDKVISELKMRLC QQVKQNKNQLLKLEKALQEAKVVDDRTLEQLAMNKLVEAAYRKLLGGRGSSSHKAGMSKVSKQLALAFAKRTVARCHKFEEMGRSCFSEPPFRDL ILNPPTTDPKYFEA

Sequence:

>c89242_g2_i5 gcagcttcgaaatatttagggtcagtggtaggcggattgaggatcaaatcccggaagggcggttcactaaagcagcttcgacccatttcctcgaa tttatggcatctggcaacagttcgctttgcaaaggctaaggctaattgctttgaaaccttgctcataccagccttatgacttgaactacctcgac cacccagtagctttctgtatgccgcctcaacaagtttgttcattgcaagctgttcaagagtcctatcatcaactactttggcctcttgaagagct ttttccaacttaagtagctgattcttgttttgcttcacctgctggcagagcctcatctttagctctgagataactttatcaatctccccaagttc tccttgatccagctcaggcgctgtctcctggtgaaggccaatgctctgcagctccaataatatcctgtcgttgagagacatatgctcaaatagac tattttgtggagaagtatttagctgagttgaaatggttggcccatattctgaaagtggcccattttctgaaggcacactaacattgctttgtgct tgtacgagatcatcaccagttccaagagtgtgaatgtttgagctcctaaagttgctagaagttgtaaacacattggggagaacgttacccattga atgactatttgggttcctaaagtctaacccaaaatcggatttcatatcatgggccccatgttcatttccaacatggctattagaagcataaggtg aatagtcacttgaaaactgctcaaagccatcatcttcttcgctgttgcagtcaaacaactcattctcatcctctgtaattaaagccgaaagaagt ctctgtgatagtggaactattttctccaaccattggtcttttcctacttttccggatgcattcattttattttgtcccgaagagcgaggtgagga ttgaaatggatggtcatccatcactctatgatcagcatcaagaacgtcgaacatacttctatcaagctccttcacaaattccatctgagtcatca caaagtctgtgtctttagaagtgacgcgagtaaaaattggttccattgtccgccaaaaagaactagaacaggcatcggagctagccttgcgagca gcatttgcagctgctaacagttcttcacgatcatcatctgattcacctgtcaggtctgaggaaccactctgtatagtttgcactggacgagcacc agccttgcgatcagaagccttttttgaaggaggacgacctaccctactttcaatcttgtctgaaccaagtctcccacttttcaatggtttggtat tgtccactgtttccaatttctctttggacaagggtaagcatgccttagattgcatagaacctcttccactccttccctgcctcctaactccgtct ccaatctcttctttcaaattaaccttactcttcttcgtaggcacaatcgaagtcgtcaccttaaggacactggcgggcccctcctcaatatcgcc atgatcaacaattactttgtccttaaacttgttttcaacagcaactgactcctcactctctgacagccccagggggggagaaacactatcagtct tcaatttcaattgctgggaactaccagcaatacccctagtgggtagatgcccagaaggctccatggatgctgacctagttccaacatccggaggc acgaacccttcagaaaatgttgtcggggcttcatcaaagtttgggagtggagggatgatgttcgctcttctttgtcttgagatcttatgctggcg ttgtcgcacccactgagtgactggtggtgatgatggtccagaggacacagggcgcttatgatggggcattccaggtaaaggctgaattttgtttg gggcagggacagattgatcccaaccgtcaattcctccaaaggagcgaggaaaagtagaagatgaattcccgataatagtcgggcctgtccttggt gcccttgatgcttttccttttgtcaaagggctttgacttcccacttgagcatcctcacaaatattttgcttatttcccttagctagaagccgttc cttatcaaggccagttgcacgttctcttctctcattagaggcagggccgttatccacatcgttcttgggcatcacacgggaagcagcaccactct gttgggaactaccatccatcttggtacttcctattaccccacttgaagatccaggtctgaagctgaggttatcactacttcgcggacggatatca ttgttagacctatgttgaactgcctgctttacctctcgatcagcatcgctagatctgttaaccattgtgccgacagaacgtttccgtctcatctt tttatccaacacttcaccaccaggagagagaacacgaagcttgtcctcagacaccacaggtccaccattgcatgttcgaagcatggttttattat ccttatcaaaaagcaaaaccttttccttatctacaacagtagattgcctgatagaaacaggcccacgtccttctggttctgccactgatgagcga aaacgtttgttgggagccacatttttcgcccggtcttccagtcttagacttaaggattctgtagggttttgagaagtttgagttcccatcttaag caaattcgaactaccaaacttctcagctgatagatcactcttttgtcgtttccgcgatactaagttgcgatacttatccaatttctgcatggatt catgcagaaactttatcctctccttagctcttgttgatgacccttcaatgctcgttttgaatcgtttgacatcctcaaaagctatcagagggagc ggcttcgattgtaccgagccaaatgaatgctcatcgacgttaactccgagaacccttcgcagctctactgagcgaggatacttttgctcacccgt tgataaaggttctaatgacagatattgagatactggcgggatttcaacagccgaagctgagtttctcgaagttccagctcccgaaacctgaacac ggctttccgagccctcacggaagcttccagacctatccagattcgaacctgagtacactccgcgctgcccattgggataagtaaatgccgaccca tccgggttatttgaagccaattctgctcttccacttcctgccattctgttgctaccgaagcataccaccttgcacccacattccaaccactaatc actcacatataaaccggcctcaatattaacatacaaatatgagaaccacatcagaaataggttcccaaagtcaaggaactccgaaacaccccata aaagttcctatgcaccataccatatgtacattaattaaaagctacaaatttcctctccctaacttaatttcatcacaactgactcaaaaaagagc ttttttttttcaggcacaaataaaagatagttgaggaagcatttgatcccctcaactggagggcccagagggcaacttaaacaatctctgaggca aattttactagcaaaatccaaaattgaagcacaaaaggggaggaaaagcttgacttgcactccaacctccctagcagaaggccaattctatacaa gtacaccacaattggaaccgaaactccaactagaaccaaaattggaccgatcaagcagctgattcaaagcggaacacgaagcccccgccacgaat tgcaccaatcgagaactcgagcgcgatcgactccgaggtaagcggggtagtcggggggcggggacagaaaccctagctgggcccggaattggagg gcggcgccgccggtcctagggctcgcatttggggggaggactggattggatcggagggcgaaattggggattggtcgagggtttcgatgagagag aaagaggtgtagagagagagagaga

Alignment:

View alignment

Alternative Splices:

Genome ID:

EST ID 1:

EST ID 2:

Start:

Stop:

Strand:

AS Code:

AS Type:

LG20

c89242_g2_i5

c89242_g2_i8

3576864

3576990

+

1^2-,0

intron retention

CDS / EST BLASTN:

Gene

e-Value

Identity

G Start

G End

E Start

E End

Aco025371.1 (View in GBrowse)

0.0

99

1035

3179

2151

1