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Species:

Ananas comosus (TPB 2016)

EST ID:

c89091_g1_i3 (View in GBrowse)

Function:

-

Full Length Predict:

Start Codon Status:

Strand and Stop Status:

-

-

-

Domain Search E-Value:

Domain / Pfam ID:

-

-

Frame:

Start:

End:

-1

577

951

PEP:

>c89091_g1_i3 MQVLINSQLELKLLTSSLNFLVELLNSSAFTNLNFSSNNSQPQHARNSNLLNFNSLLLNLELPKPSLWLGSTPPVEPAGYKVTHYTPQASLLSLF SVLYFFSQLNPFFSAELHRISFLLYFVSFG

Sequence:

>c89091_g1_i3 attacatccaacttcttcctctcttttctcttagcctaggagcaagtagtgaggtaccagcctacaaacctgcagcagggttgcaatgtaattat ggagaattagagggttaagttgcaaaatttcatccttatcatctcatccctggtttataacacctggcaaagcaccaggcttcttctctctcacc ctttttcatctctcttcttcccttttccttcagccaaaggaaacgaagtagagaaggaagctaattcggtggagttcagctgagaagaaaggatt cagctgggaaaagaaatagagaactgaaaagagagagagaagtgaagcttgaggagtgtagtgggtaaccttgtagcctgcgggttcaactggag gggttgatccgagccaaagagaaggttttggaagctccagattgagaagcaaggaattgaaattcagcaagtttgaatttcgagcatgttgaggc tgggaattattagagctgaagttcagatttgtaaaagctgatgaattgagaagctcaaccaggaagttgagactggaggtaagcaacttcaattc caattgagagttaattaacacctgcataagaattagacctaaaccataaaaattggtgttaatggataagttagtagagatgaaattggagatgt gttaactctcaattctaaattggagtgatgctgttactcatgtaaaaagctggaagtaagctaattgagtaatagaatagcttagaagcaatgct tcaaattgaattaattagtacttgaatttgtacaggaaattcaagtagataactgagcaaagtatgattgttgctcagattgagagaagaactga aggagcttctctagtatgttgaattgctagaagaatgattaaaacctgaaatctagggcttgggaggtgacttcttgctgctgaggtgctgctga actgaaggagtgtttaaagctgtggagcaggaaactaggggcagaggcactgactggaggtaaattaatatacctactgttcagagtgctgttaa ttgccttgaataaatctgaattacagatgtgaacttagaactttactgctgcaaagaagtttaaggagttgtgtttgtagcaggaaaaattaaga gagtattgggtgctgaaaattcagcatagtgtg

Alignment:

View alignment

Alternative Splices:

Genome ID:

EST ID 1:

EST ID 2:

Start:

Stop:

Strand:

AS Code:

AS Type:

LG18

c89091_g1_i2

c89091_g1_i3

3166063

3166182

-

1^2-,0

intron retention

LG18

c89091_g1_i3

c89091_g1_i5

3165701

3165944

-

1^2-,0

intron retention

scaffold_825

c89091_g1_i3

c89091_g1_i5

45555

45798

-

1^2-,0

intron retention

scaffold_825

c89091_g1_i7

c89091_g1_i3

45555

46036

-

1^2-,3^4-

complex events

LG18

c89091_g1_i3

c89091_g1_i4

3165701

3166112

-

1-3^4-,2-

complex events

scaffold_825

c89091_g1_i3

c89091_g1_i4

45555

45966

-

1-3^4-,2-

complex events

LG18

c89091_g1_i1

c89091_g1_i3

3165490

3166182

-

1^2-5^6-,3^4-

complex events

scaffold_825

c89091_g1_i3

c89091_g1_i1

45346

46036

-

1^2-5^6-,3^4-

complex events

CDS / EST BLASTN:

Gene

e-Value

Identity

G Start

G End

E Start

E End

Aco028427.1 (View in GBrowse)

1e-97

98

362

553

49

240