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Species:

Ananas comosus (TPB 2016)

EST ID:

c88130_g3_i3 (View in GBrowse)

Function:

Weakly similar to Succinate dehydrogenase assembly factor 2, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0293946 PE=3 SV=1

Full Length Predict:

Start Codon Status:

Strand and Stop Status:

Full-length

Yes

sense complete

Domain Search E-Value:

Domain / Pfam ID:

3e-13

pfam03937, Sdh5, Flavinator of succinate dehydrogenase. This

Frame:

Start:

End:

2

47

565

PEP:

>c88130_g3_i3 MATLRRALLRLPRTLTLNPARAPQSLPRIHLGSISRFSSNGGSLDVDLSNEESKRRLFNRLLYRSRQRGFLELDLVLGNYVEENIHSMDELRIRA LVDVLDLENPDLWKWLTGQEEPPEPVTCNPIFTAIRSKIMENLNKHAAPETRSSPGQPWVRGWDDKSRPYGGPKYGNQ

Sequence:

>c88130_g3_i3 tctctttcaggtcctctcctctcgcgcccgttccattccgttgtcaatggcgaccctgcgaagagctctgcttcgactcccccgaaccctaaccc taaatcccgcgagagctccacaatctcttcccagaattcatcttggatcgatctcccgcttctcctccaatggcggatcgcttgacgtcgacctc tctaacgaagagagcaagcgccgactttttaacagattgctctataggagcaggcaacgggggtttcttgagctagatttggttctggggaatta cgtggaggagaatatccattcgatggacgagctccgaatcagagcccttgttgatgttcttgacctggaaaatccagatttgtggaagtggctca cagggcaagaggaaccgccagagccagtaacctgtaatcctatatttactgctattcgatcaaagattatggaaaacctcaacaagcatgcagct ccagagactcgttcatctcctggtcaaccatgggtaagaggatgggacgataagagtcggccttacgggggtccaaagtatggaaaccaatgatc ctatttcccattccaaagatcgagcctgttgcaaaaaaggtttcttgtataatgtttatagaaagagtaagagctattgtgttcagattaacctt gtgacttgcctgtgttcctggtgaataaactgtcgtataacatgcttgcaactaatagattagagattttttgagtgtgatttttttccttgaac tgttattgttaaacttttggatcagccgtgtagaataatttctccatctctggttgcatgcttcatgtccgtcaactatttcttgaatttgtcca tttgaagacatcagttgctgctcaaagggaaaggtatgtgcaattgttgtgtctgaaaccttttcttttgcatgtttcttttggtagtaatctcg acttttattgataagtagatcatactgatcatattgatttaaccttaatatttgaaacaatagttcatgtcctaagaagcttatttttctgcagc tctgtatccagctgatgatattcaaatttgtgccacatggtttttcatgaatatttaagtatcctgtagtaaagaagatggagaatctcaatgaa tctgccatgtttttattggtggggagcctctcactacccttttctaaactccatttcctcaacttccattggtccaaagcatcttttctttgatg catcccaccaacgaaaagatcagggagagagcaattaagcagggacctctttcatataaagcaccttttttctcactatgaaatgacccaatgaa ggatatcaagttgacagggtggtcccaattggtttgtgatgcaatattattgtagtggatgtgtgggttactgtatgttattggaggcatgggaa aggaatcttttcttgttttctgaggattcgcgtgtgtatgt

Alignment:

View alignment

Alternative Splices:

Genome ID:

EST ID 1:

EST ID 2:

Start:

Stop:

Strand:

AS Code:

AS Type:

LG20

c88130_g3_i3

c88130_g3_i4

174320

174477

+

1^2-,0

intron retention

LG20

c88130_g3_i3

c88130_g3_i2

174320

177456

+

1^2-,3^4-

complex events

CDS / EST BLASTN:

Gene

e-Value

Identity

G Start

G End

E Start

E End

Aco019062.1 (View in GBrowse)

0.0

100

47

568

1

522