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Species:

Ananas comosus (TPB 2016)

EST ID:

c88107_g1_i1 (View in GBrowse)

Function:

amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=1 SV=1

Full Length Predict:

Start Codon Status:

Strand and Stop Status:

Full-length

Yes

sense complete

Domain Search E-Value:

Domain / Pfam ID:

4e-49

pfam01490, Aa_trans, Transmembrane amino acid transporter protein.

Frame:

Start:

End:

2

1514

2416

PEP:

>c88107_g1_i1 MLMFGLVQIVFSQIPDFHNMAWLSILAAIMSFSYSFIGFALGIAKVIGNGRIKGGIGGIHTATPAQKVWRVSQALGDIAFAYPYSIILLEIEDTL KSPPPENQTMKKASMISIFITTFFYLCCGCFGYAAFGDDTPGNLLTGFGFYEPYWLIDFANACIVLHLIGGYQVYSQPVFSFVDRWFSAKFPNNG FVNNFYRIKLPLLPPYRLNLLRLCFRTLYVATTTGLAMFFPYFNQVLGLLGAFNFWPLAIYFPVEMYFIQRKIEPWTKGWIVLQSFSAVCLLVSI FALVGSVEGVLAEKLS

Sequence:

>c88107_g1_i1 gaggttgtggcttagtaatgagagggacacggagagaattattgggtgggtgggaaaatgagaggccatcttttagctgcagagccaagttgtgt cagaaaaaataatagtaaataataaatattatatgaatcaatcaaaaagaatctggtcccccaatggctcattctaaaatgcctaactttgtctc accctatttacaatttgattggaggattttaagcctcacaaatagttcgaacccgaagctgaacccgaactcgacatacgtaggcgaggagatga atatgtagtcccattgatgtagactcctttccccctttgcttgtacaaaagatgttcgaaacggactcgaaccaaaccgaaaacggaaagagaat tcgactcgctctcatgcggtccaccctcgagccccgcgcaagtcacaattctaagttagagagccaaagatttcaataaggttgatgtttacttc atcccagcctagaccttctctctatattacacacttcattgagaaattggtggtgtctatctacaactctcttcactttgattaagatcataaag gaaatggctgttcaccattctcttgcactcactgatgcttcttgttccgacgatgatcgcgacatgcgaaccgggacaatttggacatgcatagc ccatataattaccgcggtgatcgggtccggcgtgttgtctctcgcgtggagcgtcgcgcaattgggttggatcggaggccccgtttcgatgcttt gctttgccatagtcacctatgtctctgcctttctcctctcagattgctacaggtcccctcaccctgtaaccggggcaagaaacccctcctatatg gatgctgttagggtaaacttaggtaccgcattatttgtaaaagctttttaccgtcacttaagagtctcttcgtcctcgctatagcttctgcaaaa gtgctttgcgtagctgcttgaaaaagtactaacactttttgtcatagtgaaaaaagaagctttcctatttgagcttttggtttaaggatttaaaa gatttttgtcagagaagtcgttccagaagccaggtcaaacaggcatttagtcgaattattcgacgcactattcgaagaatcacatcagatgcgcc gctgtttagtagctgctataacataagtttcatggctattcagggaaaaagcaaacatggttgtgtgggctacttcaatacttgagcatgtatgg gactggtattgcatatacaatcacaacttcaactagtatgaggtacactgaatataccacttgttcaaacagcaagaacaactcctaaaaatata acaaaactcaccaccaaattgttagcataagtgcttaactttgcgcatgagtttcaaattgatagaagcaatttatttcgtagtaattcgtatga attatgaacctgcagggcaattaagaaatcagactgctaccacaaagaagggcacgaagcgccgtgcgcgtacggagataacttctacatgctca tgtttggacttgttcagatagtcttctcgcagataccggatttccacaacatggcgtggctctctattctcgccgcgatcatgtcgttctcttat tccttcatcggattcgcactcgggatcgccaaagtcatcggtaatggaagaatcaaagggggcatcggagggattcatacggcaactccagctca gaaagtgtggagagtttctcaagcactcggagacatcgcattcgcctatccgtactccataatcctcctcgagatagaggacacactaaagtcgc caccgcccgaaaaccaaactatgaagaaagcatcgatgatctccatttttatcaccacattcttctacctttgttgtgggtgcttcggctatgcc gcatttggggatgacacaccggggaaccttctaactggattcgggttctacgagccgtattggcttatcgactttgctaatgcatgcattgttct tcatcttatcggtggttatcaggtctatagccaaccggtgttctcattcgtagacagatggttctcagcgaagttccccaataatggatttgtga ataacttctacagaataaaattaccacttctaccaccttatagattgaatctgctgaggctctgcttcagaaccttgtatgttgcaaccacaaca gggcttgccatgttctttccttacttcaaccaagtgttgggtttgttgggggccttcaatttttggccattggctatttacttccctgtggagat gtacttcatacagagaaagattgaaccatggacaaaggggtggattgtattgcagagttttagtgctgtgtgcctccttgttagcatatttgctc tggttggctcagtggaaggagttttagctgagaaactaagttagaaggaaccattttgcataaaattttctttccttccccctctttttttttgt gtgagtgatgagaagtgaaaggtaagaagagccaggaatcatagggttggtggtgaatgaaaggcttacagatgtaatcagctctttctgtacat ttttctcagaaagaaaatcaaggaaatcggaagttctatacatgtaatgtaatataccatgtacatcccttttttttttttggtttaatgggaaa atatctagtttgtacattcatgtcatggtaagtgtgataccaagggacaaaagttggctgttctctatctaaacagttcaagcattta

Alignment:

View alignment

Alternative Splices:

Genome ID:

EST ID 1:

EST ID 2:

Start:

Stop:

Strand:

AS Code:

AS Type:

LG20

c88107_g1_i1

c88107_g1_i6

10441669

10441871

-

1^2-,0

intron retention

LG20

c88107_g1_i1

c88107_g1_i7

10442740

10442904

-

1^2-,0

intron retention

CDS / EST BLASTN:

Gene

e-Value

Identity

G Start

G End

E Start

E End

Aco015309.1 (View in GBrowse)

0.0

98

1439

2419

397

1383