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Species:

Ananas comosus (TPB 2016)

EST ID:

c83770_g1_i7 (View in GBrowse)

Function:

Weakly similar to Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2

Full Length Predict:

Start Codon Status:

Strand and Stop Status:

Full-length

Yes

antisense complete

Domain Search E-Value:

Domain / Pfam ID:

-

-

Frame:

Start:

End:

-2

530

634

PEP:

>c83770_g1_i7 MGCRSMGPIKRMFLGSVSNYCINHVSCPVLVIRGT

Sequence:

>c83770_g1_i7 ggacactgttgcgaataatcaactctagacccttataataacatatccgagtttctattcaatcgttaattcttataaaacaacatatttgttga agcaaacagcaaaaactttaggctataaagcaattaaacagctcaaatctttgcgccgatatacaaacggacaacacgctatgcagagtgaaaaa gaaaatagttctcggtcccaactctcttcaaaacctctacaactttgcaatacaactcaaatctaggagctatagcaatttctatacagcgaaat gaaggtaactgcagggaaaaccatggactatatacaagaacttcaatggcagtcaatggtagatgcactcttagttcgaaagctagaacaacaac agcaaacacggtagaaaaggagctcatgttccccttatcacgagaactgggcagcttacatggttgatgcagtagttgctcacacttcctaagaa catcctcttgatcggtcccatcgaacgacaccccatcaccagtaagtcggcgtgcaagtttacggtggcctcgcagatcttcaccttcggatcgc ccaccaccacttcggttctcacattcacctaaaatttacggcaaaagagaaaggttcgatcacaatacaaatgcaaacgaatcaaaatacatatg attaacacaacccgatctcacgtttctatcggcgcatatatccagggcgtgcttaaggatcgcgtccgtgatccgccgctgatgcgcctcgatcg cggccgagaacgccggcacatccacatcgcttcgaccgccgaaggggatggagcccgggttgaggctcgtggcgatggacggagcgggttggacg tggaggatgatcaggacgccgggatccgcggcggcgactccggcggggcggaggttgtcgagggcccagcggagggccttcatgctctcctcgct actgtcgacggccaccaccacgcaccctaggttacctgtcgccatggacgagctgtggggagagagggagagatctagtgggggagaagg

Alignment:

View alignment

Alternative Splices:

Genome ID:

EST ID 1:

EST ID 2:

Start:

Stop:

Strand:

AS Code:

AS Type:

LG20

c83770_g1_i7

c83770_g1_i1

9381740

9381829

+

1^2-,0

intron retention

CDS / EST BLASTN:

Gene

e-Value

Identity

G Start

G End

E Start

E End

Aco014749.1 (View in GBrowse)

e-177

100

683

995

313

1