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Species:

Ananas comosus (TPB 2016)

EST ID:

c83495_g1_i3 (View in GBrowse)

Function:

serine/threonine-protein kinase WNK2 OS=Oryza sativa subsp. japonica GN=WNK2 PE=2 SV=1

Full Length Predict:

Start Codon Status:

Strand and Stop Status:

Full-length

Yes

sense complete

Domain Search E-Value:

Domain / Pfam ID:

2e-50

pfam00069, Pkinase, Protein kinase domain.

Frame:

Start:

End:

1

220

2073

PEP:

>c83495_g1_i3 MAADPPPPPQREAVLRRDEADAELFVEVDPTGRYGRYREVLGKGAFKTVYKAFDELEGIEVAWNQIKMADVLRNADDLERLKSEVHLLKTLKHKN IIKFYNSWVDTKHDNINFITEVFTSGTLRQYRNKHKHVDLRALKKWSRQILSGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILC HAHSARSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYSECTNAAQIFKKVTTGTKPASLAKVQNPEVRIFIEKCIANVSERLSAR ELLMDPFLQLDVENEQIGHSLRSNINHSGNADNAAHSNASTSYTSDKVEPTTASRDFTVEGQRKDMNTIFLKLRIADSTGQIRNIHFPFDIEADT SFNVATEMVSELDLTDQDVTTIAAMIDAEIQAYVPEWLPGEALDDNGNEETISESHNSEADDIVSALPNEPEALPSSGGLVLERLPSGRRYWSNS PRGTSEGSPSAITQSNVSSDSNSHTNDDSPFVVDYENQIAHKNVHSPEDNFEMTSSAGYLVFRNPSSSDAVDISGEDLLENESKEVRYVAEKLVY LLLEQQRELNELRQKHEKAILDILKELPPELHKKTLNRCRLKLHHNKV

Sequence:

>c83495_g1_i3 aattaaaaaaaaaaacctaaactccttcgtgtttcctcccaacgcgatcgatcgcgatcgcgatctcgatctcgatctccgacgcgttttactcc atttcatccattctcttcccgtttgattgatccgaagcttggaacgcgcaattcgggatcggaatcgttagggttccgctagggcgacgaggaat cggagctttccctccgcacgggatcggaaatggccgcggatccgccgccgccgccgcagcgggaggcggtgctccggcgggatgaggccgacgcc gagctcttcgtcgaggtcgatcccaccgggcgctacggccgatatcgcgaggtgttagggaagggtgcgttcaaaacagtctataaagcatttga tgagttggaaggtatagaggttgcttggaatcagataaagatggcggatgtgttgcggaatgcggatgacttggaacggctcaaatcggaagtcc acttgctcaaaactctaaagcacaaaaatataatcaagttctacaactcgtgggtcgataccaagcatgataacatcaatttcatcactgaggtc ttcacctccggaaccttgcgccagtatcgtaacaagcataagcatgtcgatctaagagctttaaagaaatggtcgagacaaatattaagcggcct tctctacctccacagtcacgacccaccggttattcatagagatttgaaatgtgacaacatcttcgtgaatggaaaccagggtgaggtgaagattg gcgacctcgggttggcggccattctttgccatgcccattcggctcgtagtgtcataggaacacctgagtttatggccccagagctttatgaagaa gagtataatgagctcgtcgacatttatgcatttggaatgtgcctactggagctggtcacatttgagtacccttattcggaatgtacaaatgcagc tcaaatattcaagaaggtgacaacgggtacaaagcctgcttcattggctaaggtccagaatcctgaagtgagaatatttatagagaaatgcattg ccaatgtttctgagagattgtccgcaagagagctattaatggatccatttctccaattggatgtcgagaatgaacaaataggccattctttgcgg tcaaatatcaaccattcaggaaatgcagataatgctgcgcactcaaatgcaagcaccagttacacgtctgacaaagtagaaccaactacggcaag ccgagatttcactgtggaaggacaacgcaaagatatgaatacgatatttttaaagctgagaatcgctgattcaacaggtcaaatccgaaacatcc actttccatttgacatcgaagccgatacttcattcaatgttgccactgagatggtctcagaattagacctcaccgaccaagatgtcacaaccatt gccgcaatgattgatgcagaaatacaagcctacgttccagaatggcttccgggggaagcacttgacgacaatggcaatgaggaaacaatatctga aagccacaactctgaagctgatgacatagtttctgctttgcccaatgagccagaagcacttccctctagtggtgggcttgtcctggaacggcttc cttctggtcggaggtactggtccaactctcccagagggactagtgaaggctctccctcagcaatcacccaatcaaatgtatcttctgattcaaac tcgcacaccaacgacgactccccttttgtggtagattatgagaaccaaatagcacacaaaaatgtgcattctcctgaagataatttcgaaatgac gtcctccgccggctatttggtcttccgaaatccatcttccagtgatgctgttgatatcagtggtgaggatttgttagaaaacgagtccaaagagg tgagatatgttgcagagaaactggtgtatttgctcctcgaacagcaaagggaactgaatgagttaagacagaaacatgaaaaggccatacttgat atattaaaggaactacctcccgagcttcacaagaagactttgaaccggtgccgcttgaaacttcatcataataaggtgtgagttaaaacttcatc ataagaagctcggaaattcacaatggatgtattgcagtaccatacatcaaactctcctgtgaagagtgttctgtgagtatcagaacagtccaccg tttctaagaggg

Alignment:

View alignment

Alternative Splices:

Genome ID:

EST ID 1:

EST ID 2:

Start:

Stop:

Strand:

AS Code:

AS Type:

scaffold_946

c83495_g1_i3

c83495_g1_i4

47746

48192

+

1^2-,0

intron retention

scaffold_946

c83495_g1_i3

c83495_g1_i1

50914

51263

+

1^2-,0

intron retention

LG20

c83495_g1_i3

c83495_g1_i4

959934

960379

+

1^2-,0

intron retention

LG20

c83495_g1_i3

c83495_g1_i1

963104

963453

+

1^2-,0

intron retention

CDS / EST BLASTN:

Gene

e-Value

Identity

G Start

G End

E Start

E End

Aco026574.1 (View in GBrowse)

0.0

98

220

2076

1

1875