Return Home
Species:
Ananas comosus (TPB 2016)
EST ID:
c83397_g1_i2 (View in GBrowse)
Function:
Weakly similar to Protein CPR-5 OS=Arabidopsis thaliana GN=CPR5 PE=1 SV=1
Full Length Predict: Start Codon Status: Strand and Stop Status:
3'-sequenced partial Yes antisense complete
Domain Search E-Value: Domain / Pfam ID:
- -
Frame: Start: End:
-3 36 551
PEP:
>c83397_g1_i2
MSFAAVIAQVLEGLKVSEERLPPDRLSMICTSAVREAITNIYGERLDCFMRNFEKSFCSTLKTLHVIKVKSSFEHENPGCSSLLQESPLENPGCC
SSSQGSPRSVPNLVTPDLNSIVEEFGENIPLNSINSQLILHGQANQQLAHTSHRRSHPKFNNHILNTFERSAPLQIS
Sequence:
>c83397_g1_i2
agagatctgtaaaggagcagatctctcaaatgtatttaggatgtgattattgaacttaggatgagatcttctgtgagaagtgtgagcaagttgct
gattagcttgtccatgcagaataagttggctgtttatggaattcaatgggatattttccccaaattcttcaacgatgctattcaaatcaggagtg
accaagtttggcacacttcgaggacttccttgtgaagatgaacaacaaccaggattttctagaggactttcttgtaataatgaactgcaaccagg
gttttcatgctcaaagctagattttaccttgataacatggagagttttcaacgtgctgcaaaatgatttttcaaaatttctcatgaaacaatcaa
gcctctcaccatatatattggttattgcctctctcactgctgaggtacaaatcattgaaaggcggtccggtggtaatctttcttctgaaactttc
agtccttccaaaacctgggcgataacggcggcgaaggacat
cccaagcggaagggcgagatccccgagcccataat
Alignment:
View alignment
Alternative Splices:
Genome ID: EST ID 1: EST ID 2: Start: Stop: Strand: AS Code: AS Type:
LG20 c83397_g1_i2 c83397_g1_i1 9205055 9205154 + 1^2-,0 intron retention
CDS / EST BLASTN:
Gene e-Value Identity G Start G End E Start E End
Aco014776.1
(View in GBrowse)
0.0 100 18 551 928 395