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Species:

Ananas comosus (TPB 2016)

EST ID:

c81482_g1_i1 (View in GBrowse)

Function:

Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1

Full Length Predict:

Start Codon Status:

Strand and Stop Status:

Short (49) full-leng

Yes

sense complete

Domain Search E-Value:

Domain / Pfam ID:

2e-57

pfam03081, Exo70, Exo70 exocyst complex subunit. The Exo70 protein

Frame:

Start:

End:

2

23

1480

PEP:

>c81482_g1_i1 MRPTQVRTHAIRMAHENIDKTLKAAEVILAQFDLARQAEATILRGPHEDLESYLAAIDVLKSIVHYFTSNKNLKSSDGVLNHVNNLLAKSVVKLE EEFGQLLASYSKPIEPDRLFNCLPNYLRPSAVDQRENGKNHRSEHSAKSSEGAVYKPPTLIPPRILPLLHDLAHQLVQAGHQQQCFKIYSNARAA ALESSLRKLGVEKLSKEDVQKMQWEALEAKIGNWVHFMRIAVKLLFAGERKVCDQIFDGIKIPKDQCFGEVTMNSVETLLSFGDAVAKSKRSPEK LFVLLDMYEIMHELQPEFETIFEGKACIEMRESVVSLTKRLAQTAQETFGDFEELVEKDASKTTVLDGTVHPLTSYVINYVKFLFDYQSTLKQLF MEFETGSETVSQLAIVTTRIMQALQNNLDGKSKLYRDPALTYLFLMNNTHYMVRSVRRCVYYYFASDFNRVLILFFLFFLEIYHSKSRKLQNLTF KVGICMCAQQN

Sequence:

>c81482_g1_i1 cctctccgccctcgatgccgccatgcgccccacccaagtgaggacgcacgcgatccggatggcgcacgagaacatcgacaagacgctcaaggccg cggaggtgatcctcgcgcagttcgatctcgcgcgccaggccgaggctacgatactaaggggtccacatgaggatctagaaagctatctagcagct attgacgtattgaagagcattgtccattattttacctcaaataagaacttaaagagcagtgatggagttctgaaccatgtcaacaacttgctagc caagtctgtagtcaagttggaggaggaattcgggcagctcttagcttcttacagcaaacctattgagcctgatcgtctatttaattgccttccca actatttgcgaccgtcagcagtggaccaacgtgaaaatggtaagaaccatcgctccgagcattctgccaaaagctcggagggcgctgtttataaa cctccaactctcattcctccacgcattttacctctgctgcatgacttagcccatcaattagttcaagctgggcaccaacagcagtgcttcaaaat atacagcaatgctcgtgctgcagcattagaatcaagcctccggaaactgggtgtggaaaaactcagtaaagaagatgttcagaagatgcagtggg aggctttagaggccaaaattgggaattgggtccacttcatgcgaattgctgtcaaactgctctttgctggagaacgaaaagtttgtgaccagatt tttgatggtataaagattcccaaggaccaatgctttggcgaagtgacaatgaacagtgtagaaactcttctaagctttggtgatgcagttgctaa aagcaaaaggtccccagaaaagttgtttgtgctgctagacatgtatgaaattatgcatgaactacagccagagtttgagacgatcttcgagggca aagcttgtattgagatgcgcgaatctgtagtgagtttgactaaacggttggcacagactgcgcaagaaacatttggtgactttgaagagctagtt gaaaaggatgcttcaaaaacaactgttcttgatggaaccgtccatccacttactagctacgttattaactatgtgaagttcttatttgattatca gtcaacattgaagcaactattcatggagtttgaaactgggagtgaaacagtgtctcaactggcgatagttacaacaaggattatgcaggctcttc agaataacctagacggaaaatctaagctgtacagagatccggctttgacttacctgtttcttatgaacaacacccattatatggttagatctgtg cggaggtgtgtgtattactattttgcatctgactttaatagggttttaattttattttttttattttttttggaaatataccattcaaaatcgag aaaactgcaaaatttaaccttcaaagttggtatctgcatgtgtgcccagcaaaactgagtgaatttattttgcattagtatccctgctgggggca cgcatgcaaaagctgtttttgcatggaggggcatacatgcaaataccaacttttgccaaaaacacaacaaaatatggaactttcccagggacact tggtatgtatatgtttccaggtcagaagcaaaggacatactgggtgatgactggatccaaagacatcgaaggatcgttcaacaaaatgcaaatca gtatagaaggattgcttggagcaagattctccagactctttctgttcaaggtatgaactccagcgcctctatggcaactgatggaggtaacagca gtggagtttcaagagcggcaatcaaagagcggtccacacttcatctcacatattattatcatttttttattttgcc

Alignment:

View alignment

Alternative Splices:

Genome ID:

EST ID 1:

EST ID 2:

Start:

Stop:

Strand:

AS Code:

AS Type:

LG20

c81482_g1_i1

c81482_g1_i4

2500805

2501106

+

1^2-,0

intron retention

CDS / EST BLASTN:

Gene

e-Value

Identity

G Start

G End

E Start

E End

Aco023866.1 (View in GBrowse)

0.0

100

1

1337

123

1459