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Species:
Ananas comosus (TPB 2016)
EST ID:
c79627_g1_i1 (View in GBrowse)
Function:
Weakly similar to Malate synthase, glyoxysomal OS=Brassica napus PE=2 SV=1
Full Length Predict: Start Codon Status: Strand and Stop Status:
Full-length Yes antisense complete
Domain Search E-Value: Domain / Pfam ID:
- -
Frame: Start: End:
-3 462 641
PEP:
>c79627_g1_i1
MQLYNLIKDVATAEILKVQNWQWIRYRADIGCNLPTKYFEILCLQSIKHSKFTMNSNLKL
Sequence:
>c79627_g1_i1
ggagaaaagaaataattatttatgagaaaaaaaagaaatggaatatggtctcaaaaatgagtagagaatgacatatttaagtatgtattttgagt
gcttaaaatattatcttgccgttaataaaaataacaatatgaactgcaagtaacgaaaaattatgaaagctttcctagaagtagctgctagagtt
caagataaccagcatcaatttaagaggagccccgccaagcaaacgcttctgaattagccccctccctcaaacttggaatgttcgggataaaatcc
tcaagaatcctctgctagagcccattcctgctccagagtccagactatctcaagatcatctttggtcatgaacaacttctcttcagaaaagttag
tataggtgtgaaaaaaaaatacaatgaaaggaaaaaaaaaaagaatagttagtaattctagccattaaaaaaatctaagttatagttttaagtta
gaattcatggtaaatttggaatgcttgatagattggagacataaaatttcgaaatatttagttggaagattacatcctatgtcggctctgtatct
gatccactgccagttttgcaccttcaagatctccgccgtcgcgacgtcctttatgaggttgtacagttgcat
cgagccaatccacgcaaaccatg
ccaatgcgagtgttcagcgggagaccgccgagtgtcctcgacccaagctacgggtagaggaggtgcggccagtagagggggtcacattcagagac
tgtagaagcatcatccctttgttcccttccctcgccccttctgagacctacccctcacctctttctttttccgcttcttcttctctacccactcc
cttcgtttcttcgccctcttcaacggcctctcgtggcgccgcagaggcggaggaggagaggatgtggaggcggagctcttcgacggcctctcgtg
gcgctgcggaggcagaggaggagagggtgtggaggcggaggctcctatcccaatgggagcggcggcgatgtcgagaaatctggggtcacggttag
tgtttctacagaaggtgagatgaggatgagataaaggtaagggttatgaaaagataga
Alignment:
View alignment
Alternative Splices:
Genome ID: EST ID 1: EST ID 2: Start: Stop: Strand: AS Code: AS Type:
LG20 c79627_g1_i1 c79627_g1_i2 8781880 8782064 + 1^2-,0 intron retention
CDS / EST BLASTN:
No Results