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Species:

Ananas comosus (TPB 2016)

EST ID:

c74204_g1_i2 (View in GBrowse)

Function:

Filament-like plant protein 7 OS=Arabidopsis thaliana GN=FPP7 PE=3 SV=2

Full Length Predict:

Start Codon Status:

Strand and Stop Status:

Full-length

Yes

sense complete

Domain Search E-Value:

Domain / Pfam ID:

e-127

pfam05911, DUF869, Plant protein of unknown function (DUF869).

Frame:

Start:

End:

3

63

3233

PEP:

>c74204_g1_i2 MEQKTWLWRRKSSEKNVLEKSDLLAKEQEKERALKLERSVQDLNEQLSSARTESDAKDDLLAKQAKVAEEAITGWERAETEALSFKQILDDALQQ KEVMEEKIDKLDVALKDCHQQLNVSKEEKEHIINEAAKKISKEQEKLRTLEQKLAETNKKIASLGDENSNLCTIVEMKERLIEELNESKALVEAN LAEVSKRLDLTEKGNASLKYEVCMLQKELEIRTEERGYNIKSADAAHKQQLESVKKIAKLEAECQRLRVMVRKRLPGPAALAKMRSEVELLGHDN YMELRSKSANSPKSFASRGFVSENGYEAASLLERLRASEDENKILRESLTKKTSEIEHTSSRLSQIERQLKDLSKGHDCYDHIKSSPRMYEHPLA SISEGGGHGDNVSCAESWASALISELEHFRNGKPTTPSSRSIGMSDLSLMDDFVEMEKLAVTYVDNRTLLSAQLPSRDSRSCVTTTARSDFTEEA GKELIPVENLSGYITLENYPSWLQDILRVIIQKHHITQKSIDAIFEDVRSALQKQDLFIRGNSSNALNANGNTPRKPQSASLDSFEGIVDTSASH TETANQLSKSNIEKVVSKLIEQVEGIIRRCKKNNDGQLTVSGSDTVSPKSGALNGYVARAFLWETSELTTVLRHFILVCNNLLYGKADPERFISE VSSTLDWIINHCFSLQDVSDMRESIIKHFGGDENCINEFRAVPNSPSLGKNKLDDHDEIKIKGDKIMPLFYTPNGLCSLFEMDIIESRVKESATN RAIPNIELRRSYCEEKIENGNSGNEAPITQVPESEQRTSNFRAEPEAVKESKLIDENHKLEYTAVKVELNETRKRFSSLKVEVENEISTSESEAV AASKGSPKHIIGQEENQLRTSSEIALASEKLAECQETILNLGKQLKALASPKDAALLEKVMLSPTTARPNRRLQLLDHMLAEDGANFEDPNFPQT KEIICTEPRNQQDSTAENPKPGSLNGRNVHTDDNRISNGSVQATTHPVIANKHTHEGDVEMLALVPKTQRGGTSLLRKLLLRKKESKNTKKLTLP ISSFEGKELKGV

Sequence:

>c74204_g1_i2 aaaaaagaaagaaaaaagaaaagattgtttacagctcgaacagagaaagttagaagagcagcatggaacaaaagacatggctttggaggaggaaa tcgtcagaaaagaatgtcctcgaaaaatctgatctcttagcaaaggagcaggagaaagagagggctttaaaattagagagatccgtacaagactt aaatgagcagttgtcgtcagctcgcactgagtccgatgcaaaagatgatcttttagccaagcaagcaaaagtggccgaggaagccatcacaggtt gggaaagggccgaaacagaagcattatctttcaagcaaatacttgatgatgctttacagcaaaaggaagttatggaagaaaaaatagacaagcta gatgtagctctaaaagattgccatcaacagttgaatgtctctaaggaagagaaggagcacataataaatgaagctgcaaagaaaatatccaaaga acaagaaaaactacgaactctcgaacagaagctcgccgagacaaacaagaagattgctagtttaggtgatgaaaatagtaatctctgtacgattg ttgagatgaaagaaaggttaatcgaagaactaaacgaatcaaaagcactcgttgaagcaaatttagctgaagtatcaaaaagacttgatttaacg gaaaaaggcaatgcctctcttaagtatgaggtttgcatgcttcagaaggagctggagattcggaccgaggaaaggggatataacattaaatcagc cgatgctgctcacaaacagcagctagaaagcgtaaaaaagattgcaaagctagaagcagagtgccaaagattgcgcgtgatggtccggaagcgac taccaggccctgccgctttagctaaaatgagaagtgaggttgaacttcttggtcatgacaattatatggaactgaggagtaaaagtgcaaattcc ccaaaatcttttgcatcacgtgggtttgtatcagaaaacggttatgaagcagcttctcttcttgagaggttgagggcaagcgaagatgaaaacaa aattctcagagaatcattgactaagaagaccagtgaaatcgagcatacatcgtccagactttcgcagattgagagacagctgaaggacttatcga agggacatgattgctatgatcacataaaaagtagtcctagaatgtacgaacaccctcttgcatcaatttccgagggtggtggtcatggagataat gtaagttgcgctgaatcatgggcttctgctttgatttccgagctggagcacttcaggaatggaaagccaacgacaccatcttctaggagtattgg catgtccgacttaagtttgatggatgattttgtggagatggaaaagttagcagtgacatatgttgataatagaactttattatctgcgcaacttc cttcaagggacagtagatcatgtgttaccactactgcaagatctgatttcacggaagaagcaggtaaagagctcatccccgttgagaatctctct ggatacataacacttgagaattatcctagttggcttcaggatattttaagagtgattattcagaagcatcatattacacagaaaagtatagatgc cattttcgaagatgtccgaagtgcactgcaaaagcaggatctttttattagaggaaactcctcaaatgccttaaatgctaatggcaatactccta ggaaaccccaatctgcttctttggattcatttgaaggaatagttgataccagtgcctcacataccgaaacagctaaccagctttccaaatcaaac atagaaaaggtggtatctaagttaattgagcaggtagaaggaatcattcgaaggtgcaaaaagaacaatgatggccaacttacggtatctggaag tgatacagtaagtccaaaatctggagctttaaatggatatgtcgctcgtgcatttttgtgggaaacttctgaacttacaactgtcttacgacact ttatccttgtttgtaacaatctgttatatggaaaggctgatcctgaaagattcattagtgaagtaagttcgaccctagactggattatcaatcac tgcttttccctacaagatgtgtctgatatgcgagaaagtatcataaagcattttgggggggatgagaattgcattaatgagttcagagctgtgcc gaacagcccaagcttgggtaaaaataaattagatgaccatgatgagatcaagataaaaggggataagataatgcctttattttatacgccaaatg gcctttgtagtttgttcgaaatggacattattgaatctagggttaaagaaagtgcaacaaaccgtgcgattcctaatatagaattacgaagaagt tattgtgaggagaagattgaaaatggaaattctgggaatgaagcaccaattactcaagtcccggagtcagaacaaagaacatcaaatttccgagc agaacctgaagcagtgaaggaatcaaagttaattgatgaaaatcataaattagagtatacagctgttaaggtcgaactaaacgagactcgtaaaa ggttctcatccctgaaagttgaagtggaaaatgaaatttcaacttcagaaagtgaagctgttgctgcttctaaagggagtcccaaacatattatt ggccaagaggaaaatcaacttagaactagttcagaaattgctttggcatcagagaaacttgcagagtgccaggaaacaatcctaaacctcgggaa acaattgaaagccttggcatctcccaaagatgcagcccttcttgagaaggttatgttgagcccgactaccgccagaccaaatcgtaggcttcagt tactcgatcacatgctagcggaggatggtgccaacttcgaggatcccaacttccctcaaactaaggaaatcatatgtaccgaaccacgaaatcag caagattccactgctgagaatcccaaaccaggatcgctaaatggccgaaatgtccacacagatgacaaccgcatcagcaacggttcggtacaagc tacaacacatccagtaatagctaataagcacacacatgagggtgatgtggaaatgcttgcgctcgttccgaagacacaaagagggggaacaagtt tgcttagaaagcttttattgaggaaaaaggagagcaagaatactaagaagctaacactgcccatcagctctttcgagggcaaagagttaaaaggt gtttaaagaatgggagaaaagtaatgcaaaatttagcatctaggttgggtgctttattgttatcttgcatggttatgggtgagagaagataacat ggtagtgtgtctgagagtgagtttttgtgtaatttctcttctgattgtaatgtaaatctttccttttgttttgtttcttgtaaattgggatctct gttgactctgtagccattcagttgattacagttcttgaagttgtcgagttcggagaagctacatatttagaccttgtttgatattgttgctttgt t

Alignment:

View alignment

Alternative Splices:

Genome ID:

EST ID 1:

EST ID 2:

Start:

Stop:

Strand:

AS Code:

AS Type:

LG20

c74204_g1_i2

c74204_g1_i1

7312502

7312579

+

1^2-,0

intron retention

CDS / EST BLASTN:

Gene

e-Value

Identity

G Start

G End

E Start

E End

Aco018901.1 (View in GBrowse)

0.0

99

63

3236

1

3174