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Species:

Ananas comosus (TPB 2016)

EST ID:

c72878_g1_i2 (View in GBrowse)

Function:

-

Full Length Predict:

Start Codon Status:

Strand and Stop Status:

-

-

-

Domain Search E-Value:

Domain / Pfam ID:

2e-30

pfam04949, Transcrip_act, Transcriptional activator. This family

Frame:

Start:

End:

2

98

487

PEP:

>c72878_g1_i2 MQNQMPTWDHQQQQVLRIKNSSQNYSESPTMEEKEEEESSRSALSTFRAKEEQIERKKMEVREKVFAHLGRVEEETKRLAVIREELEVMADPTRK EVAAIRKKIDVVNREMKPLRQSCLKKVKEFGLRTN

Sequence:

>c72878_g1_i2 tataataagaagctgtaaaaggaagagagttagatgttcaccatatataccgaaagaacggacctgctggaagaggtgaggttgtgtgagaagta acatgcagaatcaaatgccaacatgggatcatcagcaacaacaagttctgcgaatcaagaactcgagccagaactacagtgagagccccacaatg gaagagaaagaagaggaggagagttcgcggtcggcgctctccacattccgtgcaaaggaggaacagatagagaggaagaagatggaggtgagaga gaaggttttcgcacacctcggaagggttgaggaggagaccaagcgcttggcggtgattcgcgaggaactcgaagtaatggcagatccgacaagga aggaagttgccgctattcggaagaagatcgatgtggttaaccgtgagatgaaacctcttaggcaaagttgcctgaagaaggtgaaggaatttggc ttaagaacgaactaatttaaatttgacgattcttagagtttaattgtaattattaagtttcagtttactcataaaaataaagcttagtaaccatg agtttggcttttgttaaatgtgaaggagaaggaatacaaggaagcactagaggcattcaatgagaagaacaaggagaaggcacaattaatcaaca agttaatggagctggtcagtgagagtgaaagactcaggatgaagaagctggaagagttgagcaaaacaattgattctctctgctaaattaatttg gtcctcacaaggcctttgtgatgtcggattcatcattttatatgtttctaattggagtttgcaatgattgtttctttcatgtttgagtttgttga caacatgatgatctaacaaggggaggagttccagttaggttgtaattgagagagttactggacatgtatcatgaaaatattattcctatcccagg atcctcactatgtcatgtgaaatttctcttcatttcagtatattttatcttcgggttgtagttgcagttaaaaaaaaa

Alignment:

View alignment

Alternative Splices:

Genome ID:

EST ID 1:

EST ID 2:

Start:

Stop:

Strand:

AS Code:

AS Type:

LG20

c72878_g1_i2

c72878_g1_i1

5140440

5140576

+

1^2-,0

intron retention

CDS / EST BLASTN:

Gene

e-Value

Identity

G Start

G End

E Start

E End

Aco027052.1 (View in GBrowse)

0.0

99

98

470

1

373