BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33129 (225 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv14266265 286 2e-79 >Vv14266265 Length = 196 Score = 286 bits (732), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 137/196 (69%), Positives = 168/196 (85%), Gaps = 1/196 (0%) Query: 1 MAEEVKLLKTWSSPFGLRAFWILKLKGVQFDFIDEDLSNKSPLLLQSNPVYKKVPVLIHN 60 MAEE+KL +TWSS F LR W LK+KGVQ++ I EDLSNKSP LLQ NPV+KKVPVL+HN Sbjct: 1 MAEELKLFRTWSSVFALRIVWALKIKGVQYETIFEDLSNKSPSLLQYNPVHKKVPVLVHN 60 Query: 61 GKPISESLVILEYVDETWKQNPLLPEDPYERARARFWAKFGEDKVLVSI-WNAFIKQGKE 119 GKPI+ESLVILEY+DETW++ PLLPEDPYERA ARFWAKFG++KVL SI W F K+ KE Sbjct: 61 GKPIAESLVILEYIDETWRETPLLPEDPYERAMARFWAKFGDNKVLTSIVWGVFFKERKE 120 Query: 120 QEEAIGLAIETLKFLEEELKGKRFFGGEKIGLADLALGWLANLIGVFEEVIGVKLIEKER 179 QEEA+ A+E L+FLE+EL GKRFFGGE+IG DLALGWLAN+I +FEEV G+K++++++ Sbjct: 121 QEEAMLEAMEHLQFLEDELNGKRFFGGERIGFVDLALGWLANMISIFEEVAGLKMVDEDK 180 Query: 180 VPLLAAWMQEVAEAPV 195 PLLAAWMQE A++P+ Sbjct: 181 FPLLAAWMQEYADSPI 196 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs65357 (271 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4294 (251 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs61991 (244 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv48314 142 6e-36 >Vv48314 Length = 89 Score = 142 bits (358), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 71/89 (79%), Positives = 76/89 (85%) Query: 151 MQMEKNRINKDGEIVISSTKTRTQKGNIEDALGKLQAIIDAASYVXXXXXXXXXXXMTKL 210 MQMEKNRINKDGEIVISSTKTRTQKGNIEDALGKLQAIIDAASYV + KL Sbjct: 1 MQMEKNRINKDGEIVISSTKTRTQKGNIEDALGKLQAIIDAASYVPPPPSEEQKKKIAKL 60 Query: 211 AAIGEQKRLKSKKAVSEKKAFRRSRDSWD 239 AAIGEQKRL++KK +S+KKAFRRSRDSWD Sbjct: 61 AAIGEQKRLQNKKVLSQKKAFRRSRDSWD 89 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88194 (241 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv12502 133 3e-33 >Vv12502 Length = 228 Score = 133 bits (335), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 70/106 (66%), Positives = 79/106 (74%) Query: 5 KRLLTVDQGQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKD 64 KR LT Q QFLE++FEVENKLEPERK QLAK+LGLQPRQVAIWFQNRRAR+KTKQLEKD Sbjct: 87 KRRLTAGQVQFLERNFEVENKLEPERKNQLAKELGLQPRQVAIWFQNRRARFKTKQLEKD 146 Query: 65 YDVLQNSYNSLKADYDNLFXXXXXXXXXXXXXTDKLQVKEKESKNT 110 YD L+ SY+SLKADYD + TDK + EKE + T Sbjct: 147 YDSLKASYDSLKADYDCILKEKEKLKTELLLLTDKALIGEKEGEKT 192 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11970 (151 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs173106186 (253 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4806 209 4e-56 >Vv4806 Length = 349 Score = 209 bits (532), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 100/219 (45%), Positives = 140/219 (63%) Query: 35 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGF 94 VPA+I FGDS+VD GNNN ++T+ K+N+ PYGRDF +PTGRF NG++ DF ++ G Sbjct: 25 VPAVIVFGDSSVDAGNNNRISTVLKSNFEPYGRDFTGGRPTGRFSNGRIPPDFISEAFGL 84 Query: 95 KTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKV 154 K PAYL P + G FASAG+GYD++TS + I L ++L+YY+EYQ KL Sbjct: 85 KPTVPAYLDPNYNISDFATGVCFASAGTGYDNQTSDVLSVIPLWKELEYYKEYQEKLRAY 144 Query: 155 AGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYG 214 G +++ I+ +++Y++ G+ DFL+NYY+ + YT QY LV I +FIK +Y Sbjct: 145 LGQEKANEILSESLYLMSLGTNDFLENYYIFSGRSSQYTVPQYEDFLVGIAGNFIKEIYS 204 Query: 215 LGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDA 253 LGARK + LPP+GCLP RT + S C+ R N A Sbjct: 205 LGARKVSLGGLPPMGCLPLERTTNFFGGSECIERYNNVA 243 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82708 (301 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv5666259 203 2e-54 >Vv5666259 Length = 300 Score = 203 bits (517), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 137/313 (43%), Positives = 176/313 (56%), Gaps = 55/313 (17%) Query: 11 NGGGG----EIMLFGVRVVVDSMRKSVSLNNLSQYEQPQDNSSHCXXXXXXXXXXXKXXX 66 +GG G +IMLFGVR+ + RKS S+ NLSQYEQPQD+++ Sbjct: 21 SGGAGAAANDIMLFGVRITEGAFRKSASMTNLSQYEQPQDSNADA--------------- 65 Query: 67 XXXXXXXXXXXVHNNSSRASRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTR 126 VH +S SRERKRGVPWTEEEH+LFLLGLQKVGKGDWRGISRNFVKTR Sbjct: 66 ----GYASDDVVH--ASARSRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTR 119 Query: 127 TPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS-VAATPMEEELVDHQDHNPSQSYPL 185 TPTQVASHAQKYF FDIT D+ + +T +EE+ V + +P Q + Sbjct: 120 TPTQVASHAQKYFLRRNNHNRRRRRSSLFDITADTFMGSTILEEDQVHQETVSPPQLHSH 179 Query: 186 LPPTPAETSNKSGGFSM--MPAXXXXXXXXIEN--PMENLTLGQNSQRTAGEATRLIRXX 241 L + +GGF + P + + ME LTLGQ++Q A T+LIR Sbjct: 180 L-------NGSAGGFPVPTFPVTMAPVVLPVASNGSMEILTLGQSNQ--AKGPTKLIRPI 230 Query: 242 XXXXLPAAQPSSTVSDLNLNLNLAVDPPPLSQR-----------ESSSRH-SAFQVM-QT 288 +P PSS ++DLNLN+ DP PLS + +++RH SAFQ M ++ Sbjct: 231 PILPVP---PSSKMADLNLNIPSTADPLPLSLKPSSSTSTSPQSPTATRHSSAFQAMSES 287 Query: 289 FNNGDSNSIISVA 301 FN+ ++IISVA Sbjct: 288 FNSSTGDNIISVA 300 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs22106186 (229 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv55360 102 5e-24 >Vv55360 Length = 387 Score = 102 bits (255), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/148 (47%), Positives = 93/148 (62%), Gaps = 19/148 (12%) Query: 21 ATPDKVLATAVAPTSVSGKPVGPVLSPGMPTKLELRNAPGMNVKASPTSVPQPCAVLPPE 80 A KV +VAPT+V+GK V P + E+ A AS TS P V Sbjct: 214 AASHKVSVNSVAPTNVAGKSVRP-----LHRNEEIHAA----CVASSTSAGSPFEVCQ-- 262 Query: 81 TWIQNERELKRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSEN 140 Q+ER+LKRERRKQ+NRESA++SRLRKQAE EEL + ++L +EN +LK EI++L+E+ Sbjct: 263 ---QDERQLKRERRKQANRESAKKSRLRKQAENEELRMRYETLNEENKALKFEISKLTEH 319 Query: 141 SEKLRQENAALLEKLKSAQLGNKQEIVL 168 +K+R EN AL EKLK NKQ++ L Sbjct: 320 LDKVRLENTALREKLK-----NKQQLEL 342 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs57061 (231 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs36548 (165 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82726 (394 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44440 (347 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96195 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs35963 (102 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs53026 (441 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs81965 (86 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16106183 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs86545 (400 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs204106188 (76 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs92759 (293 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs105992 (177 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4317 (283 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs26435 (278 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv351 117 2e-28 >Vv351 Length = 286 Score = 117 bits (293), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 123/226 (54%), Gaps = 14/226 (6%) Query: 24 KSAECIKQLEQEIKVLGHLKHENIVQYYGSEVVDDHLYIYLEYVHPGSINRYVREHCRDI 83 + ++ QL +E+++ HL+H NI++ YG +Y+ LEY G + + +++ C+ Sbjct: 60 QQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYF 118 Query: 84 TESIVRNFTRHILNGLAYLHSTNTIHRDIKGANLLVDASGVVKLADFGMAKHLTGLSYEL 143 +E + + L Y H + IHRDIK NLLV A G +K+ADFG + H + Sbjct: 119 SERRAATYVASLARALIYCHGKHVIHRDIKPENLLVGAQGELKIADFGWSVHT--FNRRR 176 Query: 144 SLKGSPNWMAPEVIKAVMQKDGNPKLALAVDIWSLGCTVIEMLTGKPPWSEFEGPQAMFK 203 ++ G+ +++ PE++++V + D +VDIWSLG E L G PP+ E + Sbjct: 177 TMCGTLDYLPPEMVESV-EHDA------SVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRR 229 Query: 204 VLN---RTPPIPEMLSSEGKDFLLRCFLRNPVERPSAVELLEHPFI 246 ++ + PP P ++SS KD + + +++ +R +LLEHP+I Sbjct: 230 IVQVDLKFPPKP-IVSSTAKDLISQMLVKDSSQRLPLHKLLEHPWI 274 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60385 (165 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv21166264 199 3e-53 >Vv21166264 Length = 193 Score = 199 bits (505), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 98/163 (60%), Positives = 117/163 (71%), Gaps = 1/163 (0%) Query: 1 MSTGDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIIL 60 MSTG+L++I+P EL+FPFEL+KQ SCS+QL+NKTD +VAFKVKTTNPKKYCVRPNTG+++ Sbjct: 1 MSTGELLSIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVM 60 Query: 61 PRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFK 120 PR++C V VTMQAQ+E P D QCKDKFLL S +A GATAKDI DMF KE G VEE K Sbjct: 61 PRSTCDVIVTMQAQRETPQDMQCKDKFLLQSAIASPGATAKDITSDMFNKEAGNRVEECK 120 Query: 121 LRVVYIPANXXXXXXXXXXXXXXX-RAFSQENGNHHNSSFDDV 162 LRV Y+P RA +NGN + S F V Sbjct: 121 LRVAYVPPPQPPSPVREGSEEGSSPRASVSDNGNINASEFTAV 163 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs75192 (239 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv43227 115 5e-28 >Vv43227 Length = 220 Score = 115 bits (289), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 115/230 (50%), Gaps = 15/230 (6%) Query: 11 SGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSWKSMEMEIQSL 70 S W+ LRK+ARK+E LD ++ Y KL + VD G K ++ I L Sbjct: 5 SSWDALRKQARKLEAQLDEQMHLYRKLVSM-----KVD--------GDKEKEIDSGIDQL 51 Query: 71 LEKLLDINDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLS 130 L++L +N M + S+ + + L RH++IL + TQEF R++ + + +EHA LL Sbjct: 52 LKQLQQVNSHM-QAWVSSGGSEIFSHTLTRHQEILQDLTQEFYRLRSSFRAKKEHASLLE 110 Query: 131 SVRD-DISEYKASGSMSPRMQILRERAAIHGSITHIDDVISQAQTTRTVLGSQRALFGDV 189 R+ D S +L+E A+I S +D VISQAQ T L QR+ FG + Sbjct: 111 DFREFDRSRLDLEEGGGSEQALLKEHASISRSTGQMDTVISQAQATLGALVFQRSTFGGI 170 Query: 190 QGKVKVLSDKFPIXXXXXXXXXXXXXXDTLILAAVIAGCTLFLIIYWLSK 239 K+ +S + P DT+IL+ V + CT ++IYWL+K Sbjct: 171 NSKLSNVSSRLPTVNNILSAIKRKKSLDTIILSLVASVCTFLILIYWLTK 220 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs171106184 (175 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2967 253 1e-69 >Vv2967 Length = 262 Score = 253 bits (647), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 118/168 (70%), Positives = 133/168 (79%) Query: 3 FQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGT 62 FQLY+SGIFTGRCGT+LDHGVTAVGYGTENG DYWIVKNSWG+SWGE GYIRMER++A + Sbjct: 75 FQLYQSGIFTGRCGTALDHGVTAVGYGTENGVDYWIVKNSWGASWGEEGYIRMERDLATS 134 Query: 63 LTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSC 122 TGKCGIAMEASY VCDNYY+CPES+TCCC+FEY C Sbjct: 135 ATGKCGIAMEASYPIKKGQNPPNPGPSPPSPIKPPTVCDNYYACPESSTCCCIFEYAKYC 194 Query: 123 FAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGSEGI 170 F WGCCPLEAATCC+DH SCCP +YP+CNVRAGTC+MSKDNPLG + + Sbjct: 195 FQWGCCPLEAATCCEDHDSCCPQEYPVCNVRAGTCMMSKDNPLGVKAL 242 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59000 (168 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv44799 82 4e-18 >Vv44799 Length = 197 Score = 82.4 bits (202), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 37/42 (88%), Positives = 41/42 (97%) Query: 110 PRKPRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKL 151 PRKPRVKLGDIMGILNKRA+EASE ERP+PD+RTGD+VEIKL Sbjct: 103 PRKPRVKLGDIMGILNKRAIEASEKERPVPDLRTGDIVEIKL 144 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs38703 (93 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7708 (215 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv17040 340 1e-95 >Vv17040 Length = 210 Score = 340 bits (871), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 167/208 (80%), Positives = 183/208 (87%), Gaps = 1/208 (0%) Query: 1 MGTVVETPVKEADAXXXXXXXXXXX-XLGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAE 59 MG+ E+ +KE + LGGPGSGKGTQCANIV+HFGYTHLSAGDLLRAE Sbjct: 1 MGSAPESVIKETNENLLAEKKVKVVFVLGGPGSGKGTQCANIVKHFGYTHLSAGDLLRAE 60 Query: 60 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAV 119 IKSGSENG MIQ+MIKEGKIVPSEVTIKLLQ+A+ E NDKFLIDGFPRNEENRAAFEAV Sbjct: 61 IKSGSENGNMIQSMIKEGKIVPSEVTIKLLQRAILEDSNDKFLIDGFPRNEENRAAFEAV 120 Query: 120 TKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGK 179 TKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPV++YYE+KGK Sbjct: 121 TKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVIEYYESKGK 180 Query: 180 VRKIDAAKPVAEVFDAVKAVFTPKDEKV 207 VRKIDAA+ + EVF+AVKAVFTP +E+V Sbjct: 181 VRKIDAAQSIEEVFEAVKAVFTPTNEQV 208 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs22280 (191 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64592 (221 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv54458 258 6e-71 >Vv54458 Length = 164 Score = 258 bits (659), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 124/154 (80%), Positives = 138/154 (89%) Query: 36 VQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYSTITILGSKR 95 + G +RG+FGVPSAKKSEIEALV+LLESQNPTP PT NLDKV G WKLVYSTITILGSKR Sbjct: 10 IPGSSRGVFGVPSAKKSEIEALVKLLESQNPTPEPTLNLDKVNGWWKLVYSTITILGSKR 69 Query: 96 TKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFKIASKSRVDIA 155 TKLGLR+FITLGDF Q IDV + KAVNVIKFN RG N LNG+L IEASFKIASKSRVDI Sbjct: 70 TKLGLRNFITLGDFLQIIDVEEAKAVNVIKFNARGFNFLNGELKIEASFKIASKSRVDIK 129 Query: 156 YDNSTITPEQLMNMFRKNYDLLLGIFNPDGWLEI 189 YD+STI P++LMN+F++NYDLLLGIFNP+GWLEI Sbjct: 130 YDSSTINPDKLMNVFKQNYDLLLGIFNPEGWLEI 163 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs30017 (90 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs27272 (257 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv9212 115 6e-28 >Vv9212 Length = 176 Score = 115 bits (289), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 50/101 (49%), Positives = 73/101 (72%) Query: 1 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 60 M + MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+ Sbjct: 75 MVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRM 134 Query: 61 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 101 ++AGR +T L+ +L+ RGY TA+ E VR++KEKL Y+ Sbjct: 135 NVAGRHITSYLVDLLSRRGYAMNRTADFETVREIKEKLCYI 175 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs54852 (241 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv11110 77 2e-16 >Vv11110 Length = 229 Score = 77.4 bits (189), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 8/139 (5%) Query: 97 QFVVIRPVCSILMIALQLLGLYSNW-ISWT-----FTIILNISVSLALYSLVIFYHVFAK 150 Q+++I+ + +IL + L+ LY W ++LN S S ALY LV FY V Sbjct: 24 QYMIIKSLSAILAVILEAFSLYCEGDFKWGCGYPYIAVVLNFSQSWALYCLVQFYTVTKD 83 Query: 151 ELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVALGVIKSHHFWLDVEHVEEALQNALVCV 210 EL KPL+KFL K IVF +WQG+ + +L LG+ KS + ++Q+ ++C+ Sbjct: 84 ELEHIKPLAKFLTFKSIVFLTWWQGVAIALLYDLGLFKSAI--AQGLQSKSSVQDFIICM 141 Query: 211 EMVFFAAFQRYAYSAKPYR 229 EM + Y + AKPY Sbjct: 142 EMGIASIVHLYVFPAKPYE 160 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78136 (347 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv32041 472 e-135 >Vv32041 Length = 333 Score = 472 bits (1214), Expect = e-135, Method: Compositional matrix adjust. Identities = 245/353 (69%), Positives = 270/353 (76%), Gaps = 26/353 (7%) Query: 1 MGVPETDPLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLP 60 MGVPETDPLSQL+LPPGFRFYPTDEELLVQYLCRKVAGQ FSL+IIGEIDLYKFDPWVLP Sbjct: 1 MGVPETDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGQGFSLEIIGEIDLYKFDPWVLP 60 Query: 61 SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFY 120 SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK+ITTEGRKVGIKKALVFY Sbjct: 61 SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFY 120 Query: 121 VGKAPKGTKTNWIMHEYRLFEPSRKNGSSKLDDWVLCRIYKKHSGSQKPVSATSVXXXXX 180 +GKAPKGTKTNWIMHEYRL E SRKNGSSKLDDWVLCRIYKK+S S KP++A V Sbjct: 121 IGKAPKGTKTNWIMHEYRLLENSRKNGSSKLDDWVLCRIYKKNSNSSKPIAA--VLPSKA 178 Query: 181 XXXXXXXXXXXHLDDVLESLPEIDDRFFALPRMNSLKTLQQEDNKVNNLQHLGSGNFDWA 240 HLDDVLESLPEIDDRFF+ RMNSL+ + Q D KV N +LGSGNFDWA Sbjct: 179 HSNGSSSSSSSHLDDVLESLPEIDDRFFSPNRMNSLR-VSQPDEKV-NFHNLGSGNFDWA 236 Query: 241 SLAGLHSVPEFVSAAXXXXXXXSHG---VACYANNDFYVPSMPQMCHVNSGRVGNSVEEE 297 +LAG+ S+ E VS SH A +N+ YVPS+P + EEE Sbjct: 237 TLAGVSSLQELVSGV------QSHAQPPAAVNNSNEMYVPSLPPLIQ---------AEEE 281 Query: 298 VQSGLRNQRVD---NSGLFQHNSAVLTQPNFCSPVDPYGLRHPTQSSGFGFRH 347 VQSGLR QRVD N G F NS +Q +F + +DP+G R+PTQ SGFG+R Sbjct: 282 VQSGLRTQRVDPVMNQGFFPQNSNAFSQ-SFSNSLDPFGFRYPTQPSGFGYRQ 333 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs54271 (51 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs36395 (380 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv27467 69 1e-13 >Vv27467 Length = 181 Score = 68.9 bits (167), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 3/97 (3%) Query: 27 NVGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLL 86 VGG GW + G +Y+ W+ F V D L F Y + SV V+K YDSC T P Sbjct: 23 TVGGSSGW--DTGVDYSTWASGETFTVGDYLVFTYGS-THSVDEVSKSSYDSCATSNPTK 79 Query: 87 KLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVV 123 G + L +G YF+ HC +G KL + V Sbjct: 80 SYTGGSNTIALTTAGSLYFLCPTTGHCSQGMKLAITV 116 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100466 (345 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv60046 521 e-150 >Vv60046 Length = 572 Score = 521 bits (1343), Expect = e-150, Method: Compositional matrix adjust. Identities = 252/345 (73%), Positives = 289/345 (83%), Gaps = 5/345 (1%) Query: 1 MATPL--NKRFSSAKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIE 58 MA L N R S A ERTGQWVFSQEIPTD+VV VGEANF LHKFMLVAKSNYIRKLI+E Sbjct: 1 MAASLKGNNRRSLAMERTGQWVFSQEIPTDVVVEVGEANFSLHKFMLVAKSNYIRKLIME 60 Query: 59 SKEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVHNVAALRCAAEFLQMTDKYCENN 118 SKEADLT I+LS+IPGGPE+FEKAAKFCYGVNFEITVHNVAALRCAAE+LQMTDKYC+ N Sbjct: 61 SKEADLTNIDLSDIPGGPEIFEKAAKFCYGVNFEITVHNVAALRCAAEYLQMTDKYCDGN 120 Query: 119 LAGRTEDFXXXXXXXXXXXXXXXXKSCEALLPLAEDLLIVQRCIDVATAKACYEANFPCR 178 L+GRTEDF KSCE LLP AE+L IVQRC+DVA+ KAC EANFP R Sbjct: 121 LSGRTEDFLKQVALTSLSGAVVVLKSCEDLLPKAEELKIVQRCVDVASTKACNEANFPSR 180 Query: 179 TPPNWWTEELSIIDIEFFSRIIAAMKKRGAKALTIASALITYTERSLRDLVRDHSAGNGT 238 +PPNWWTEELSI+DI FF +IIAAMK RGAK+LT+ASALITYTER+LRDLVRDH+ GNG Sbjct: 181 SPPNWWTEELSILDIGFFEKIIAAMKLRGAKSLTVASALITYTERTLRDLVRDHT-GNGI 239 Query: 239 KSSDAQSTNSQVRYQQRELLESIVSLMPSEKAAFPINFLCCLLRSAIFLKASTSCKNELE 298 +SSD + +N +R +QRELLE+IV L+PSE+AA PINFLCCLLRSAIFLK + +CKNELE Sbjct: 240 RSSDTEDSN--LRSRQRELLEAIVVLLPSERAALPINFLCCLLRSAIFLKVAHTCKNELE 297 Query: 299 KRVQLFGNHVSVDDLLGLSFTYDGERLFDLESVKRSLMGFLKRKK 343 KR+ HV+VDDLL LSFTYDGERLFDL+SV+R + GF++++K Sbjct: 298 KRISAILEHVTVDDLLVLSFTYDGERLFDLDSVRRIISGFVEKEK 342 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs74272 (299 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv12502 63 8e-12 >Vv12502 Length = 228 Score = 62.8 bits (151), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 33/72 (45%), Positives = 41/72 (56%) Query: 134 KKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEV 193 KK RL+ Q LE +F+ N L P GL+PRQV +WFQNRRAR K KQ E Sbjct: 86 KKRRLTAGQVQFLERNFEVENKLEPERKNQLAKELGLQPRQVAIWFQNRRARFKTKQLEK 145 Query: 194 DCEFLKRCCENL 205 D + LK ++L Sbjct: 146 DYDSLKASYDSL 157 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs36641 (261 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60159 (242 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv13466261 100 5e-23 >Vv13466261 Length = 160 Score = 99.8 bits (247), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%) Query: 85 YLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSA 144 YL+A++ E LR +P G + P ED + GY +P + ++ +P++WENP Sbjct: 3 YLKAVVLEGLRRHPPGHFVLPHSVTEDVSFEGYDIPKNATVNFIVSELNWNPKIWENPME 62 Query: 145 FQPERFLP--GHGAHAD----VDVRG-QQFELIPFGSGRRSCPGASSALQVLHLTLARLL 197 F+PERFL G G H D D+ G ++ +++PFG+GRR CPG A+ L +A L+ Sbjct: 63 FKPERFLDINGDGDHGDEGEAFDITGSREIKMMPFGAGRRICPGYGLAMLHLEYFVANLV 122 Query: 198 HAFELATPLDQPVDMSESPGLTIPKATPL 226 F+ VD+SE T+ PL Sbjct: 123 WNFDWKAVEGDEVDLSEKLEFTVVMKNPL 151 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs66686 (338 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs8647 (235 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16055 (261 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs27028 (238 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv16991 408 e-116 >Vv16991 Length = 380 Score = 408 bits (1049), Expect = e-116, Method: Compositional matrix adjust. Identities = 189/237 (79%), Positives = 215/237 (90%), Gaps = 1/237 (0%) Query: 2 NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 61 Q +P++YV+LYTYQI R L Y+H V GVCHRD+KPQNLLV+P THQ+K+CDFGSAK+LV Sbjct: 133 KQRMPLIYVKLYTYQIFRGLAYIHSVPGVCHRDLKPQNLLVDPLTHQVKLCDFGSAKVLV 192 Query: 62 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVE 121 GE NISYICSR+YRAPELIFGATEYTT+ID+WS GCVLAELLLGQPLFPGE+ VDQLVE Sbjct: 193 KGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 252 Query: 122 IIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLR 181 IIK+LGTPTREEI+CMNP+YT+F+FPQIKAHPWHK+FHKRMPPEA+DL SRLLQYSPSLR Sbjct: 253 IIKVLGTPTREEIRCMNPSYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 312 Query: 182 CTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 238 CTALEACAHPFFD+LR+PN LPNGRPLP LFNF QEL+GAS EL +LIPEH R+ Sbjct: 313 CTALEACAHPFFDELREPNARLPNGRPLPPLFNF-KQELSGASPELVNKLIPEHVRR 368 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs103613 (148 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64862 (266 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv31880 108 1e-25 >Vv31880 Length = 249 Score = 108 bits (269), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 54/83 (65%), Positives = 63/83 (75%) Query: 167 TCPINAXXXXXXXXXXXXXVHIGLGNPVENACCPVLKGLLELEAAICLCTTIRLKLLNLN 226 TCPI+ VHIGLG+PV N CCPVL GL+ELEAA+CLCTT+++KLLNLN Sbjct: 165 TCPIDTLKLGACVDLLGGLVHIGLGDPVANECCPVLSGLVELEAAVCLCTTLKIKLLNLN 224 Query: 227 IFIPLALPALITCGKTPPPGFVC 249 IF+PLAL LITCGKTPPPG+ C Sbjct: 225 IFVPLALQLLITCGKTPPPGYTC 247 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs9104 (101 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv13517 88 4e-20 >Vv13517 Length = 95 Score = 87.8 bits (216), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 44/92 (47%), Positives = 52/92 (56%) Query: 1 MESDTDAGVNGTHWWWTLASTGQLGWGIASFRKGYAGDSRLMPVKAFXXXXXXXXXXXXX 60 ME + +G+HWWW LAS QLGWG+ S+R+G GDS LMPVKAF Sbjct: 1 MEENGHGSGDGSHWWWALASAAQLGWGVFSYRRGGVGDSSLMPVKAFGVASLFVGAAASA 60 Query: 61 XXXXXXXXXIRKVEDLLEVGANIRTRLGIPSR 92 I KVEDL E+GANIRT LG+ R Sbjct: 61 AFGVLHASGIHKVEDLKEMGANIRTGLGVRPR 92 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104818 (144 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv25277 152 2e-39 >Vv25277 Length = 216 Score = 152 bits (385), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 77/151 (50%), Positives = 100/151 (66%), Gaps = 10/151 (6%) Query: 2 IWDXXGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 61 IWD GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVG Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127 Query: 62 NKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNGEQAFMAMAASIKDRMASQPSM 120 NK D+ +K V +A ADE GI F ETSAK + N E+ F ++A IK R+A S Sbjct: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAETDS- 186 Query: 121 NNARPPTVQI-------KGQPVAQKSGCCST 144 A P T++I G QKS CC + Sbjct: 187 -KAEPQTIKINQPDQAANGGQAPQKSACCGS 216 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96106185 (136 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv14945 274 5e-76 >Vv14945 Length = 136 Score = 274 bits (700), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 136/136 (100%), Positives = 136/136 (100%) Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60 Query: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120 Query: 121 MPKDIQLARRIRGERA 136 MPKDIQLARRIRGERA Sbjct: 121 MPKDIQLARRIRGERA 136 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25519 (85 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs29709 (121 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs99245 (197 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs61199 (399 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv50199 163 5e-42 >Vv50199 Length = 415 Score = 163 bits (413), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 113/282 (40%), Positives = 144/282 (51%), Gaps = 48/282 (17%) Query: 148 TTPFGGQNDTWDLISAAAGQIARLKMSNGSEAAPTYTTNVSGRATGLLAPPKSSNPV--H 205 TTP + D WDLI AAAGQ+ARLKMS P Y + GLL PP+S PV Sbjct: 152 TTPLSEKTDAWDLIYAAAGQVARLKMSGD---GPKYQ-----QGRGLLGPPRSPMPVPTQ 203 Query: 206 VIKNPYFGFYSIENVNFDLAANTTQVQYQHYVKQEQMLKAQSQRLQQIQPKA-------- 257 KN GFYS ++ L+ N +Q +++QEQ+LK Q + +A Sbjct: 204 PAKNANTGFYSYQS----LSNNISQTSQSQHIRQEQVLKQQCSVWGREAKEAWFSQQQQQ 259 Query: 258 ----------RNFGYVNGRCGQQQ--PQSAWX-XXXXXXXXXXXXXXXXVFVAGSGCVRR 304 R+ G +GRCG+ P SAW VF+ GSG ++R Sbjct: 260 LQQQQQIHSRRSVGLESGRCGRPLGLPPSAWPPLQHQHQHQQSSSGMRAVFLGGSG-LKR 318 Query: 305 GCAGTGVFLPRRYGNINNPHDSRKKSGSPNGFVPTTTTPAMNF-------HAQQRFNCSF 357 AGTGVFLPRR+GN + DSRKK G +P A+N H+Q FN Sbjct: 319 ESAGTGVFLPRRFGNAS---DSRKKPGCSTVLLPARVVQALNLNFEDMGSHSQPHFNGGV 375 Query: 358 GPNYVADAIIARRNALITLQKRGLRQEAARNHEIHLPKEWTY 399 P+Y +A++ARRNALI+ QKR LR EA NHEI LP+EWTY Sbjct: 376 APDY--EALMARRNALISQQKRNLRPEATMNHEIRLPQEWTY 415 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs43896 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs73216 (81 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs95113 (242 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69600 (228 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs159106185 (315 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv10935 119 1e-28 >Vv10935 Length = 110 Score = 119 bits (297), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/73 (82%), Positives = 66/73 (90%) Query: 124 IFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSALAL 183 I G +SILLFTP FS+LILQ QLQPQEF+TGL +FSCM TTLSSGVALT LAGGNSALAL Sbjct: 28 ILGFYSILLFTPLFSRLILQFQLQPQEFITGLPIFSCMLTTLSSGVALTQLAGGNSALAL 87 Query: 184 AMTIISNLLGIMI 196 AMT+ISNLLGI+I Sbjct: 88 AMTVISNLLGILI 100 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs27951 (235 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv57970 327 1e-91 >Vv57970 Length = 277 Score = 327 bits (837), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 151/235 (64%), Positives = 195/235 (82%), Gaps = 1/235 (0%) Query: 1 FDRHLSPQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALNYFRGPAEASVDAVHFVLKEL 60 FD+ LS +NVRK+++EADGYQPHLIAPEQGYRRLI+S++ RGPAEA+VDAVH +LKE+ Sbjct: 44 FDKQLSMENVRKLITEADGYQPHLIAPEQGYRRLIESSIVSIRGPAEAAVDAVHAILKEM 103 Query: 61 VRRSIGETQELKRFPTLQSEIAAAANKALERFRDDSKKTTMRLVEMESSYLTVDFFRKLP 120 V ++I ET E K++P L+ E+A AA +L+R RD+SKK T++LV+ME SYLTVDFFRKLP Sbjct: 104 VNKAISETAEFKQYPALRIEVANAACDSLDRMRDESKKATLKLVDMECSYLTVDFFRKLP 163 Query: 121 QDMERGGNPTAPSAADRYTEGHFRRIGSNVSSYVGMVSETLKNTIPKAVVHCQVKEAKRS 180 QD+E+GGNPT S DRY + + RRIG+ V SYV MV TL+N+IPK++V+CQV+EAKRS Sbjct: 164 QDIEKGGNPTH-SIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRS 222 Query: 181 LLDHFYAQLGKKEGKQLAQLLDEDPMLMERRQQCAKRLELYKSARDEIDSVSWTR 235 LLDHF+ +LGK E KQLA LL+EDP +M RR AKRLELY+SA+ EID+V+W++ Sbjct: 223 LLDHFFTELGKLEPKQLASLLNEDPAVMARRTALAKRLELYRSAQAEIDAVAWSK 277 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42834 (50 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs54723 (91 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs101682 (347 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv38202 577 e-166 >Vv38202 Length = 478 Score = 577 bits (1487), Expect = e-166, Method: Compositional matrix adjust. Identities = 279/345 (80%), Positives = 308/345 (89%) Query: 1 MMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDF 60 MMSL VKSKT D VKC VVDGGELKSRRHLNVRGKSA LPSIT+KDW+DIKFGVDN+VDF Sbjct: 134 MMSLMVKSKTGDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDF 193 Query: 61 YAVSFVKDAKVVHELEDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGA 120 YAVSFVKDAKVVHEL++YLKSCNADIHVIVKIESADSIPNLHSII+ASDGAMVARGDLGA Sbjct: 194 YAVSFVKDAKVVHELKNYLKSCNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGA 253 Query: 121 ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV 180 ELPIE+VPLLQE+IIR CRSM K VIVATNMLESMI HPTPTRAEVSDIAIAVREGADAV Sbjct: 254 ELPIEEVPLLQEEIIRICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAV 313 Query: 181 MLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMAN 240 MLSGETAHGKFPLKAVKVMHTV+LRTE++L S PP A K+HM +MFAFH+T M+N Sbjct: 314 MLSGETAHGKFPLKAVKVMHTVSLRTEATLVGSPMPPNLGQAFKNHMSEMFAFHATMMSN 373 Query: 241 TLNTPIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEE 300 TL T I+VFTRTG MA++LSHYRPS TIFAFTN+ER++QRL +YQGV PIYMQFSDD EE Sbjct: 374 TLGTSIVVFTRTGFMAILLSHYRPSGTIFAFTNEERVQQRLAVYQGVCPIYMQFSDDAEE 433 Query: 301 TFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 345 TF+ A+ LL + +V +GE V LVQSG QPIWR +STH+IQVRKV Sbjct: 434 TFANALTLLQKQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV 478 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs208106187 (302 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18608 (133 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs30681 (257 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv31003 195 8e-52 >Vv31003 Length = 427 Score = 195 bits (495), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 96/201 (47%), Positives = 134/201 (66%), Gaps = 2/201 (0%) Query: 1 MPNRSVQDHLTSRFQATLP--WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 58 MP S+++HL T P WN+R+KIA AA+GL YLH+ M +I+RD K SNILL Sbjct: 188 MPLGSLENHLHDLPPGTKPLDWNSRMKIAAGAAKGLEYLHDKMYPPVIYRDLKCSNILLG 247 Query: 59 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 118 E ++ KLSDFGLA++GP+ +HVST V+GT GY AP+Y TG+LT+KSDI+SF V L E Sbjct: 248 EGYHPKLSDFGLAKVGPTGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFRVVLLE 307 Query: 119 LITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKC 178 LITGR+ +D ++ EQ L+ W RP D +KF+ + DP L G+Y ++ + A+A C Sbjct: 308 LITGRKAIDNSKGAREQNLVAWARPLFKDRRKFSQMADPLLHGQYPVRGLYQALAIAAMC 367 Query: 179 LARQAKGRPKMSEVVEVLNKI 199 + Q RP +++VV LN + Sbjct: 368 VQEQPNMRPLIADVVTALNYL 388 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs35401 (134 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4564 (213 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs65452 (220 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs62644 (272 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv8462 67 4e-13 >Vv8462 Length = 305 Score = 66.6 bits (161), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 4/67 (5%) Query: 136 DGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTCR 195 DG+ WRKYGQK + N+ PRSY+RCT+ C K+V+R +DP + TTY G H C Sbjct: 163 DGYRWRKYGQKAVKNSPFPRSYYRCTNSK---CTVKKRVERSSEDPSIVITTYEGQH-CH 218 Query: 196 DIISFPQ 202 + FP+ Sbjct: 219 HTVGFPR 225 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs80643 (134 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs63673 (206 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv20467 381 e-108 >Vv20467 Length = 252 Score = 381 bits (979), Expect = e-108, Method: Compositional matrix adjust. Identities = 178/206 (86%), Positives = 192/206 (93%) Query: 1 MGGAVGYGNLYSQGYGTNTAALSTALFNNGXSCGSCYEMKCENDPKWCLPGSIIVTATNF 60 MGGA GYGNLYSQGYGTNTAALSTALFN+G SCG+CYEMKC +DPKWCLPG++ VTATNF Sbjct: 47 MGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGACYEMKCNDDPKWCLPGTLTVTATNF 106 Query: 61 CPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVN 120 CPPNLALSN NGGWCNPPLQHFD+AEPAFLQIAQYRAGIVP+SFRR+PC KKGGIRFT+N Sbjct: 107 CPPNLALSNTNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTIN 166 Query: 121 GHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTAS 180 GHSYFNLVLITNV GAGDV +VSIKGSKTGWQ MSRNWGQNWQSNSYLNGQ+LSFQ+TAS Sbjct: 167 GHSYFNLVLITNVAGAGDVRAVSIKGSKTGWQPMSRNWGQNWQSNSYLNGQTLSFQVTAS 226 Query: 181 DGRTVTSNNVVPGNWQFGQTFEGGQF 206 DGRT+TS NV P WQFGQT+EG QF Sbjct: 227 DGRTMTSLNVAPAGWQFGQTYEGAQF 252 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93621 (220 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs57144 (161 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs145106181 (301 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv33548 65 2e-12 >Vv33548 Length = 269 Score = 65.1 bits (157), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 94/229 (41%), Gaps = 55/229 (24%) Query: 3 DRISKLPDDILICILSRLTIEEAARASILSYRWRYLWRFFTGSLDFVDPYKIRRLAILSD 62 D IS LP I+ IL RL I EA R SILS +WRY W +G D V Sbjct: 8 DLISNLPLSIIESILVRLPIREAVRTSILSSKWRYRW---SGITDLVFE----------- 53 Query: 63 PYYKCEDNYFIRAKRRNFINLV-----DPIIGLLQTKSLQQLRICYPVNSDYDVDSWVQF 117 +D + + K + FI V PI T S LRIC D+D W+ F Sbjct: 54 -----DDLFLLNDKLKKFITQVLLLHAGPIHKFQITTS--NLRIC------PDIDQWILF 100 Query: 118 AVDKRVQRLELDFSES------------------KTEGHELHTFSPYFKTTSSFSSLVSL 159 V+ + L+ E + ELH P FK F L L Sbjct: 101 LSRNDVKEILLELGECEWFTVPSCLFSCQKLTRLELVRCELHP-PPTFK---GFLHLKIL 156 Query: 160 RLIDVDIPEEVLHYLLCYCPLLEVLTLKGAEKLIRIRVSGPSLKLKYLE 208 L V I E + L+ CPLLE L+L + L + +S P+LK +LE Sbjct: 157 NLHQVSITCEAIQSLVSSCPLLECLSLSYFDSL-ALNISAPNLKYLFLE 204 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs91166 (138 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6613 (344 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs81812 (178 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs10163 (156 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv13327 82 4e-18 >Vv13327 Length = 259 Score = 82.4 bits (202), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 68/118 (57%) Query: 26 YIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLI 85 + + +E+A +LKL+ +Q G+ LL+ + E QR+ T E LI+AG++ W LI Sbjct: 140 FAKWVEKATAPAIGSSLKLYEVVQSLGFKTFLLTGRSENQRSVTVENLINAGFQNWDKLI 199 Query: 86 MRLDNEMQMDSREYLSRRRAILQKEGFHITGLISNQMDALIGQSLGKRVFKIPNPLYY 143 +R N+ + Y S +R+ + KEG+ I G +Q L+G + R FK+PNP+YY Sbjct: 200 LRGSNDHGKQATVYKSEKRSEMVKEGYRIVGNSGDQWSDLLGSEMSLRSFKLPNPMYY 257 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs46488 (88 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs37779 (250 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25409 (359 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv8266259 74 6e-15 >Vv8266259 Length = 187 Score = 73.6 bits (179), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 41/65 (63%) Query: 159 VAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXKLRGEFAR 218 +A+P + YRGVRQRHWG WV+EIR P +TR+WLGTF+T + G AR Sbjct: 1 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60 Query: 219 LNFPH 223 NFP+ Sbjct: 61 TNFPY 65 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11732 (187 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67400 (188 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv33548 145 5e-37 >Vv33548 Length = 269 Score = 145 bits (366), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 76/167 (45%), Positives = 111/167 (66%), Gaps = 8/167 (4%) Query: 16 ELDRLSSLPAHVIDQILSQLPIRDAVRTSVLSKKWRYKWATVPHLVFDNHCVSTSSQDQT 75 +LD +S+LP +I+ IL +LPIR+AVRTS+LS KWRY+W+ + LVF++ D Sbjct: 6 KLDLISNLPLSIIESILVRLPIREAVRTSILSSKWRYRWSGITDLVFED--------DLF 57 Query: 76 FIKNKLVNIVDHVLLLHNGPILKFKLSHRDLLGVSDIDRWILYMSRSCVKEFILEIWKGQ 135 + +KL + VLLLH GPI KF+++ +L DID+WIL++SR+ VKE +LE+ + + Sbjct: 58 LLNDKLKKFITQVLLLHAGPIHKFQITTSNLRICPDIDQWILFLSRNDVKEILLELGECE 117 Query: 136 RYKVPSSLFLCPNLIHLELFNCLLKPPITFKGFXNXESLDLHTLPLS 182 + VPS LF C L LEL C L PP TFKGF + + L+LH + ++ Sbjct: 118 WFTVPSCLFSCQKLTRLELVRCELHPPPTFKGFLHLKILNLHQVSIT 164 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs36796 (99 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv34026 61 5e-12 >Vv34026 Length = 193 Score = 60.8 bits (146), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 29/55 (52%), Positives = 36/55 (65%) Query: 1 MNCLQPVLSGVAVGAGWQSLVAYINLGCYYIVXXXXXXXXXXXXXXXAEGIWSGM 55 +N +QPVLS VAVG+GWQ+LVAYINLGCYYI+ +G+W GM Sbjct: 122 LNSMQPVLSXVAVGSGWQALVAYINLGCYYIIGVPLGCLLGYLAKFGVKGLWGGM 176 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs68699 (299 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4980 (215 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs24434 (163 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv19263 91 1e-20 >Vv19263 Length = 166 Score = 90.5 bits (223), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 2/139 (1%) Query: 3 VARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCG 62 + R +KN +V GGGA ++ +S L+Q + +I G + + A A E IPR L N G Sbjct: 2 IVRRALKNSTVVAGGGAIDMEISRYLRQHARTIAGKSQLFINSYAKALEVIPRQLCDNAG 61 Query: 63 INVIRTMTALQGKHA--NGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAAC 120 + + L+ KHA +GE G+D NTG I+D +W+ VK A EAAC Sbjct: 62 FDATDVLNKLRQKHALPSGEGGLFGVDINTGGIADSFANFVWEPAVVKINAINAATEAAC 121 Query: 121 MLLRIDDIVSGIKKKQAPG 139 ++L +D+ V K + A G Sbjct: 122 LVLSVDETVKNPKSESAQG 140 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs2330 (152 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv966263 240 9e-66 >Vv966263 Length = 247 Score = 240 bits (613), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 111/124 (89%), Positives = 120/124 (96%) Query: 1 MKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNL 60 MKKN+DSLYWQNVQLYTFGAIFNM RL+LDD+R GFEKGPWW RLF+GY++TTWMVV NL Sbjct: 120 MKKNDDSLYWQNVQLYTFGAIFNMARLILDDYRSGFEKGPWWHRLFNGYSVTTWMVVLNL 179 Query: 61 GSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 120 GSTGLLVSWLMKYADNI+KVYSTSMAMLLTMVLSV+LFNFKPTLQLFLGI+ICMMSLHMY Sbjct: 180 GSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLSVFLFNFKPTLQLFLGIVICMMSLHMY 239 Query: 121 FAPP 124 FAPP Sbjct: 240 FAPP 243 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4097 (100 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs97786 (72 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100716 (208 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv38423 66 5e-13 >Vv38423 Length = 131 Score = 65.9 bits (159), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 30/58 (51%), Positives = 35/58 (60%) Query: 140 MGELDNKPFLEVMNRKYNXXXXXXXXXXLCSLWEEYLKDPDWHPFKVITAEGKHKVCI 197 MG+LD KPF + M RKY+ LCSLWE+ L D WHPFKVIT +G K I Sbjct: 1 MGDLDTKPFQKAMKRKYSEEEANEKALELCSLWEQNLTDSSWHPFKVITDKGNCKEII 58 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18453 (279 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs40125 (180 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs8517 (220 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104138 (95 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64315 (311 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs70486 (206 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69533 (182 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs58599 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs105279 (292 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60403 (93 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs21917 (91 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42535 (167 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67272 (229 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs84538 (216 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3106 384 e-108 >Vv3106 Length = 251 Score = 384 bits (985), Expect = e-108, Method: Compositional matrix adjust. Identities = 184/216 (85%), Positives = 193/216 (89%) Query: 1 MCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPII 60 MCCL INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPII Sbjct: 1 MCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPII 60 Query: 61 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQS 120 VTGNDFSTLYAPLIRDGRMEKFYWAP REDRIGVCKGIFR+DNV DDDIVK+VDTFPGQS Sbjct: 61 VTGNDFSTLYAPLIRDGRMEKFYWAPNREDRIGVCKGIFRSDNVPDDDIVKIVDTFPGQS 120 Query: 121 IDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIV 180 IDFFGALRARVYDDEVR W LVNSKE PTFEQP+MT+EKLLEYGNM+V Sbjct: 121 IDFFGALRARVYDDEVRKWISGVGVDFIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLV 180 Query: 181 QEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 216 EQENVKRVQLADKYLSEAALG+AN D+I+ G FYG Sbjct: 181 MEQENVKRVQLADKYLSEAALGDANVDSIERGTFYG 216 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs86125 (251 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs30943 (66 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs105558 (358 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv40140 133 4e-33 >Vv40140 Length = 391 Score = 133 bits (335), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 95/268 (35%), Positives = 132/268 (49%), Gaps = 13/268 (4%) Query: 89 KHIDSQSLLGLTTTKEGDVVICDSKKGLFKVTEEG----VKVLDPD---VRFANDVIDAS 141 +HI + L + GD+ I DS GL KV EG V + D +RF ND+ Sbjct: 127 EHICGRPLGLRFNKRTGDLYIADSYLGLMKVGPEGGLATSLVTEADGVPLRFTNDLDIDD 186 Query: 142 DGTLYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGVALSKDE 201 G +YFT SS+KY +F + + G+LLKYDP + +TTVL G F NGV+LSKD Sbjct: 187 AGNIYFTDSSSKYQRRNFMQLVFSSEDSGRLLKYDPLTKETTVLLRGLQFPNGVSLSKDG 246 Query: 202 DFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNINLAPDGSFWIALIKMNQTGV 261 F+V+CE R +YWLKGD+ GT + FA LPG PDN+ G FW+A I +T Sbjct: 247 SFLVLCEGSPGRLVKYWLKGDKAGTSEVFA-ILPGYPDNVRTNEKGEFWVA-IHCRRTMY 304 Query: 262 KAIQNCREKWELL---EAYPGLISLLLPMGSDAGARVVKVDGIDGKIIRDFNDPNATYLS 318 + K + P LL +G A VVK +GK+++ D + Sbjct: 305 SYLCGLYPKLRMFLLKLPIPTRYQYLLHIGGRLHAVVVKYS-PEGKLVKILEDSEGKVVR 363 Query: 319 FVTSAVEYNDNLFLASLQSNFIGVLPLH 346 V+ E L++ S+ F+ V L Sbjct: 364 AVSEVEEREGKLWMGSVLMPFVAVYQLE 391 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs94948 (245 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60752 (252 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69364 (225 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs58905 (279 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs101605 (113 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs80727 (341 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3566262 74 3e-15 >Vv3566262 Length = 359 Score = 74.3 bits (181), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 28/288 (9%) Query: 56 VEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESA 115 + +AGG+ N+I+ + +G G D+ G N ++GVN+ + Sbjct: 81 MRTMAGGSVANTIRGLSAGFGV--NCGILGACGDDEQGGLFVSNMGSSGVNLSALRIKKG 138 Query: 116 PTGTCAVCVVG--GERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPE 173 PT C VC+V G R++ LS+A ++E L + + + Y I + L V Sbjct: 139 PTAQC-VCLVDALGNRTMRPCLSSAVKIQAEELTKEDFKGVKWLVMRYGI--YNLEVIHA 195 Query: 174 SIQMVAEHAAAKNKVFM-MNLSAPFICEFFREPQEKALPY--MDYVFGNETEARTFAKVH 230 +I+M A + VF+ ++L++ + FR P + L +D F NE EAR + Sbjct: 196 AIRM-----AKQEGVFVSLDLASFEMVRNFRGPLLELLQSGDIDLCFANEDEARELLR-- 248 Query: 231 GWETDNVE-EIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLV 289 + +N E AL+ H + V+T G++ + A+ G+ ++ V + + K Sbjct: 249 --DDENASPEAALEFL------AKHCQWAVVTLGSNGCL-AKCGR-EMVRVAAIGEAKAT 298 Query: 290 DTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPK 337 D GAGD F GGFL LV+ +E+C R G VI+ G P+ Sbjct: 299 DATGAGDLFAGGFLYGLVKGLSLEECCRVGTCNGGSVIRSLGGEVTPE 346 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs19180 (177 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs47702 (182 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv43714 121 7e-30 >Vv43714 Length = 152 Score = 121 bits (304), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 87/143 (60%), Gaps = 2/143 (1%) Query: 32 TTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFP 91 +T +RL ++ L G+S P+ +I W I G T ++G ++KL+L F Sbjct: 2 STPARKRLMRDFKRLQQDPP-AGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60 Query: 92 LDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPES 151 DYP KPP V+F + FHPN+ G+ICLDILQ++WS YD IL SIQSLL +PNP S Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120 Query: 152 PLNSYAAALLN-NKEDYRKMVQK 173 P NS AA + + NK +Y + V++ Sbjct: 121 PANSEAARMFSENKREYNRRVRE 143 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93496 (196 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs83766 (130 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs23937 (65 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs39715 (158 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv20031 149 2e-38 >Vv20031 Length = 283 Score = 149 bits (376), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 81/158 (51%), Positives = 103/158 (65%), Gaps = 12/158 (7%) Query: 10 LTSRFNALGLSNKDLVALAGGHTIGQARCTSFRAHIYNET-------NIDASFARTRQGN 62 + ++F GL+ DLVAL+G HTIG +RCTSFR +YN++ ++D S+A + Sbjct: 127 ILTKFKLHGLNIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNGRPDYSLDQSYAAQLRAR 186 Query: 63 CPRANGTGDNNLAPLDLQTPTSFDNNYFKNLVNRKGLLHSDQQLF--NGGSTDSQVRTYS 120 CPR+ G D NL LD +PT FDN+YFKN++ KGLL SDQ LF N S D V+ Y+ Sbjct: 187 CPRSGG--DQNLFFLDFVSPTKFDNSYFKNILASKGLLSSDQLLFTKNQASMD-LVKQYA 243 Query: 121 NNPSTFSSDFVAGMIKMGDISPLTGSRGEIRKNCRRIN 158 N F F MIKM +ISPLTGSRGEIRKNCRR+N Sbjct: 244 ANNKIFFEQFAQSMIKMANISPLTGSRGEIRKNCRRVN 281 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs86870 (272 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv23749 152 5e-39 >Vv23749 Length = 237 Score = 152 bits (385), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 79/208 (37%), Positives = 122/208 (58%), Gaps = 4/208 (1%) Query: 6 RPQFVLFGSSIVQLGFSNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQVFP--K 63 RP+ LFG SI + F +GGWGA L+ ++R D++LRGY G+N+R AL+V+++VFP Sbjct: 2 RPEIYLFGDSITEASFCDGGWGASLAHHFSRTVDVVLRGYSGYNTRWALEVIEKVFPVVS 61 Query: 64 DAPIQPSLVIVYFGGNDSMGPHPSGLGPHVPLPEYVENMRRIATHLKSLSCATRIIFLST 123 P V V+FG ND+ P HVP+ EY +N+ I + LK T ++ ++ Sbjct: 62 RGGGAPLAVTVFFGANDACLPDRCSAFQHVPIHEYKQNLHSIVSFLKKRWPTTLVLLITP 121 Query: 124 PPVD-EARINQGTSEIFSEL-VRTNELCQKYSDACINLCHDLGVKAVDLFTAIQKRDDWK 181 PP+D E R+ E L RTNE Y+ AC+++ + G VD++T +Q DW Sbjct: 122 PPIDEEGRLRNPYVENPMGLPERTNEAAGAYAKACVDVAGECGGPVVDIWTKMQHISDWP 181 Query: 182 NACFTDGIHLSEEGSKIVVAEILKVLKQ 209 C +DG+HL++ G+KIV E++ L++ Sbjct: 182 RICLSDGLHLTQSGNKIVFEEVVARLRE 209 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs99356 (134 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78954 (207 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv43152 152 4e-39 >Vv43152 Length = 121 Score = 152 bits (385), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 75/121 (61%), Positives = 89/121 (73%), Gaps = 3/121 (2%) Query: 90 MDQMTENPFFSGTRG---GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRX 146 MD +NPF S +RG G+RR WD KETDDAL+L +DMPGL KEDV+VS+EQNTL I+ Sbjct: 1 MDHFMDNPFLSTSRGMGTGIRRSWDVKETDDALHLRVDMPGLSKEDVKVSVEQNTLTIQG 60 Query: 147 XXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKV 206 S RRY+SRIDLPEKLY+T +IKAEM GVLK+ VPK+KEEER DV VKV Sbjct: 61 EEKNETEDEESRRRYSSRIDLPEKLYKTGEIKAEMNKGVLKIVVPKLKEEERTDVINVKV 120 Query: 207 D 207 + Sbjct: 121 E 121 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25592 (183 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16351 (161 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv41034 187 8e-50 >Vv41034 Length = 180 Score = 187 bits (475), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 92/131 (70%), Positives = 108/131 (82%), Gaps = 5/131 (3%) Query: 19 HQTAYNLKIWESFTTEIPTQVKGG-----KGPFICFVLGGPGSGKGTQCAKIVKNYGLTH 73 +Q AY KIWE FTTEI T K G K PFI FV+GGPGSGKGTQCAKIV+ +G TH Sbjct: 21 NQAAYGGKIWELFTTEILTPAKAGISSDEKTPFITFVVGGPGSGKGTQCAKIVETFGFTH 80 Query: 74 LSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKKFLIDGFPRS 133 +SAGELLRREI+ NSE+G+ IL++I+EGKIVPSEVTV LI+KEMESS + KFLIDGFPR+ Sbjct: 81 ISAGELLRREISCNSEHGSMILDSIREGKIVPSEVTVKLIEKEMESSKNNKFLIDGFPRT 140 Query: 134 EENRAAFERIV 144 EENR AFER++ Sbjct: 141 EENRIAFERVI 151 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs648 (238 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs35726 (96 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs63760 (63 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs85452 (269 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv786 66 7e-13 >Vv786 Length = 278 Score = 65.9 bits (159), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 45/48 (93%), Positives = 47/48 (97%) Query: 115 LKLIEEETARRVEEAIRKKVEESLNSEEIKMEIQRRLEEGRKRLLDEV 162 LKL+EEET RRVEEAIRKKVEESLNSEEIK+EIQRRLEEGRKRLLDEV Sbjct: 124 LKLVEEETTRRVEEAIRKKVEESLNSEEIKLEIQRRLEEGRKRLLDEV 171 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs94336 (242 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3309 63 5e-12 >Vv3309 Length = 273 Score = 63.2 bits (152), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 69/128 (53%), Gaps = 20/128 (15%) Query: 66 SYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK 124 +YL G +PGDYG+DP GLS PE K+ AY E+I+ R+AMLGA G I PE K Sbjct: 76 AYLTGEVPGDYGYDPFGLSKKPEDFA-----KYQAY-ELIHARWAMLGAAGFIIPEAFNK 129 Query: 125 AGLIPQETALAWFQTGVIPPAG-TYNYWAD--PYTLF---VLEMALMGFAEHRR------ 172 G A+ WF+TG + G T NY+ P L V E+ L+G AE+ R Sbjct: 130 FGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLIFAVVAEVVLVGGAEYYRIINGLD 188 Query: 173 FQDWANPG 180 +D +PG Sbjct: 189 LEDKLHPG 196 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs97567 (87 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs22021 (221 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42309 (150 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs43713 (96 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs17126 (220 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs54924 (140 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs48309 (241 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18494 (63 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs21219 (82 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv56231 76 1e-16 >Vv56231 Length = 362 Score = 76.3 bits (186), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 34/57 (59%), Positives = 44/57 (77%) Query: 23 VEEEMLRCLTTLSWERVDVNFSRSRQRFLAHSTIQVKTYCINSDGTEVIQHMIDNFL 79 +EEE+L L+ +SWE+VDV+F RQRF AHS IQVK Y + +G +VIQHMID+FL Sbjct: 305 LEEELLMGLSCVSWEKVDVSFHACRQRFAAHSVIQVKDYVAHREGADVIQHMIDHFL 361 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52434 (203 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv23174 303 2e-84 >Vv23174 Length = 207 Score = 303 bits (776), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 147/211 (69%), Positives = 172/211 (81%), Gaps = 12/211 (5%) Query: 1 MAMTSDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAP 60 MA S+E T ICSHCDR+IPS+NIDLH+ HCSRNLERCK CGDMVP+K+AEEH+LNTHA Sbjct: 1 MATASNEATSICSHCDRSIPSTNIDLHYVHCSRNLERCKHCGDMVPKKHAEEHYLNTHAS 60 Query: 61 VACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCN 120 V+CS CSETMEREILA+H+GE CPQRIVTC+FCEFPLPA+DL+EHQEVCGNRTELCHLC Sbjct: 61 VSCSLCSETMEREILAVHRGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNRTELCHLCR 120 Query: 121 RYIRLRERYNHESRC-------TGVPENTVG-SSRNVRAAESDQGAHRRPAPPPPNEFYR 172 RY+RLRER +HE+ C GVP+NTV S R+ RAAE +QG RR PP EF + Sbjct: 121 RYVRLRERNDHEANCNGVSYDSVGVPDNTVSPSRRDARAAEREQGGRRR----PPQEFSQ 176 Query: 173 KRFLLTIAITGIAVLLGSLFFPRKTETSQVH 203 +R L TI ITGIAV+L SLFF RKTE +++H Sbjct: 177 RRVLFTIGITGIAVILRSLFFQRKTENTEMH 207 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25776 (104 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv33350 91 5e-21 >Vv33350 Length = 189 Score = 90.9 bits (224), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 2/97 (2%) Query: 1 MAPEFLRGEPS--NEKSDVYSFGVILWELVTMQQPWNGLSPAQVVGAVAFQNRRLAIPQN 58 MAPE L G+ + EK DVYSFG+++WEL+T +P+ + A ++G + R IP+ Sbjct: 90 MAPELLSGKTNMVTEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQIPRW 149 Query: 59 TSPVLASLMESCWADDPAQRPSFANIVESLKKLLKSP 95 P LMESCWA DPA+RPSF+ I + L+ + +P Sbjct: 150 CEPEWKYLMESCWASDPAERPSFSEISQKLRNMADAP 186 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs84445 (149 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs167106188 (229 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv34451 127 2e-31 >Vv34451 Length = 176 Score = 127 bits (318), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 90/229 (39%), Positives = 110/229 (48%), Gaps = 53/229 (23%) Query: 1 MTTNKEANSNIIAATSAKDSQSQASCPAECCMCGDYGVSNELFRCKVCQFRSQHRYCSNL 60 MTT+K A + + SQ S ECCMCGDYG S ELF+CKVCQFRSQHRYCSNL Sbjct: 1 MTTSK--------AGTVGGAASQPS--PECCMCGDYGFSYELFQCKVCQFRSQHRYCSNL 50 Query: 61 YPKAESYQVCNWCLSQRDEKDKXXXXXXXXXXXKINGREGXXXXXXXXXXXXXXXXXXXX 120 YPKA+SY+VCNWCL+Q+D+ + N E Sbjct: 51 YPKADSYRVCNWCLNQKDDTPEKTQNSSNSSSSNKNNEENDGRIKKKKIGSGSH------ 104 Query: 121 XXXXXRVLLMKSQRSINLKLQQPNNKPIEKQRSXXXXXXXXXXXXXXXKRIITNGALEEK 180 K+QR LQ P + PI+KQ+S KRII +G +EE+ Sbjct: 105 ---------AKAQRG---SLQLPVSGPIKKQKS-------PERSPTTRKRIIASGCMEER 145 Query: 181 NLIKRKKSEEMAXXXXXXXXXXXXTVTPVRRPFFRNKVRRYKLLDEVSS 229 + R SE + + FRNKVRRYKLLDEVSS Sbjct: 146 --LTRTNSEGSG----------------ITKHVFRNKVRRYKLLDEVSS 176 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs68010 (146 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv18966262 183 9e-49 >Vv18966262 Length = 322 Score = 183 bits (465), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 83/143 (58%), Positives = 108/143 (75%), Gaps = 2/143 (1%) Query: 1 MNAHSCGFNSALLEKGKSVWVMNVVPTIGTNYLPMILDRGFVGVLHDWCEAFPTYPRTYD 60 MNA G N+A LE +SVWVMNVVPT N LP+IL +GF GVLHDWCE FPTYPRTYD Sbjct: 182 MNARYGGLNAAFLEAKRSVWVMNVVPTRTQNTLPLILYQGFAGVLHDWCEPFPTYPRTYD 241 Query: 61 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDA 120 ++HA GLLS + C+ +++ E+DRILRPEGWV++ D IE ARAL T+++W+A Sbjct: 242 MLHANGLLSHLTS--EGCNIMNLLLEMDRILRPEGWVVLSDNMVAIEKARALATQIRWEA 299 Query: 121 RVIEIESNSDERLLICQKPFFKR 143 RVI+++ +D+RLL+CQKPF K+ Sbjct: 300 RVIDLQKGTDQRLLVCQKPFLKK 322 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs2138 (77 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs22808 (169 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82041 (309 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv48981 477 e-136 >Vv48981 Length = 263 Score = 477 bits (1227), Expect = e-136, Method: Compositional matrix adjust. Identities = 231/263 (87%), Positives = 245/263 (93%), Gaps = 2/263 (0%) Query: 4 AETVSLMDFDEDENQNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDIVD 63 AE V++MD DE++N LK + GK+V+V G PPD KA+PWVEKYRPQSLADVAAHRDIVD Sbjct: 2 AEAVTVMDIDEEDNHLLKA-NKGKSVVVGG-PPDRKATPWVEKYRPQSLADVAAHRDIVD 59 Query: 64 TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQ 123 TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASDDRGIDVVRQ Sbjct: 60 TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVRQ 119 Query: 124 QIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNK 183 QIQDFASTQSFSFG K+SVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICN VNK Sbjct: 120 QIQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 179 Query: 184 IIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNIL 243 IIPALQSRCTRFRFAPL+ VHVTERLKHVI AE LDV+E GLAALVRL +GDMRKALNIL Sbjct: 180 IIPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNIL 239 Query: 244 QSTHMASQQITEEAVYLCTGNPL 266 QSTHMASQQITEEAVYLCTGNP+ Sbjct: 240 QSTHMASQQITEEAVYLCTGNPI 262 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs22543 (210 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs32325 (165 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv31003 112 5e-27 >Vv31003 Length = 427 Score = 112 bits (279), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 3/148 (2%) Query: 1 MRPSNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYAENGIVSIRTDV 58 ++ SNILL + P L DFGLA+ T D V T+++GT GY AP+YA G ++ ++D+ Sbjct: 239 LKCSNILLGEGYHPKLSDFGLAKVGPTGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDI 298 Query: 59 YAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLI-EKLALHELIDPRIENSYDTYELY 117 Y+F ++LL+L++GRK +D + +Q+L WA PL ++ ++ DP + Y LY Sbjct: 299 YSFRVVLLELITGRKAIDNSKGAREQNLVAWARPLFKDRRKFSQMADPLLHGQYPVRGLY 358 Query: 118 LMAKTAYLCVQRNPEGRPSMGEVVRLLE 145 A +CVQ P RP + +VV L Sbjct: 359 QALAIAAMCVQEQPNMRPLIADVVTALN 386 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44620 (200 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv41556 383 e-108 >Vv41556 Length = 339 Score = 383 bits (983), Expect = e-108, Method: Compositional matrix adjust. Identities = 184/198 (92%), Positives = 190/198 (95%), Gaps = 1/198 (0%) Query: 1 MMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVNGFTLDPSLGEFILTHPD 60 M+KD EPTLD+VLQPG NMLAAGYCMYGSSCTLVLSTG+GVNGFTLDPSLGEFILTHP+ Sbjct: 143 MVKDGGEPTLDNVLQPGKNMLAAGYCMYGSSCTLVLSTGTGVNGFTLDPSLGEFILTHPN 202 Query: 61 IKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFPKDGSSPKSLRYIGSMVADVHRTLLYG 120 IKIPKKGKIYSVNEGN KNWD PTAKYVEKCKFPKDGSSPKSLRYIGSMVADVHRTLLYG Sbjct: 203 IKIPKKGKIYSVNEGNTKNWDAPTAKYVEKCKFPKDGSSPKSLRYIGSMVADVHRTLLYG 262 Query: 121 GIFMYPRDKKSPNGKLRVLYEVFPMSFLMEQAGGQSFTGKQRALDLVPKKIHERSPIFLG 180 GIF+YP DKKSPNGKLRVLYEVFPMSFLMEQAGGQ+FTGKQRALDLVPK IHERSPIFLG Sbjct: 263 GIFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKQRALDLVPKNIHERSPIFLG 322 Query: 181 SYDDVEEIKALFYAAEEK 198 SYDDVEEIKAL YAAEEK Sbjct: 323 SYDDVEEIKAL-YAAEEK 339 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs73702 (143 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33185 (141 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv1466263 239 1e-65 >Vv1466263 Length = 160 Score = 239 bits (611), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 120/153 (78%), Positives = 123/153 (80%), Gaps = 28/153 (18%) Query: 4 GGIARGRLTEERKAWRKNHPH----------------------------TDWEGGYFPLT 35 GGIARGRL EERKAWRKNHPH TDWEGGYFPLT Sbjct: 3 GGIARGRLAEERKAWRKNHPHGFVAKPETGPDGSVNLMVWHCTIPGKAGTDWEGGYFPLT 62 Query: 36 LYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLD 95 L+FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNED+GWRPAITVKQILVGIQDLLD Sbjct: 63 LHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 122 Query: 96 QPNPADPAQTDGYQLFIQDPAEYKRRVRQQAKH 128 QPNPADPAQTDGYQLFIQ+PAEYKRRVRQQAK Sbjct: 123 QPNPADPAQTDGYQLFIQEPAEYKRRVRQQAKQ 155 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs103953 (171 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv29255 236 2e-64 >Vv29255 Length = 175 Score = 236 bits (602), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 117/172 (68%), Positives = 129/172 (75%), Gaps = 4/172 (2%) Query: 1 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT 60 MGTFGYVAPEYASTGMLNERSDVYSFGIL+ME+ISGRNPVDYSRPPGEVNLVEWLK MVT Sbjct: 1 MGTFGYVAPEYASTGMLNERSDVYSFGILLMEIISGRNPVDYSRPPGEVNLVEWLKAMVT 60 Query: 61 NRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEAEEFPFRD-- 118 NRNAEGVLDP++ EKP S CVDPNA KRPKMGHVIHMLEA++FPFRD Sbjct: 61 NRNAEGVLDPKIPEKPSSRALKRALLVALRCVDPNAQKRPKMGHVIHMLEADDFPFRDFQ 120 Query: 119 ERRAGREHGRSPHNGIKGRLMEKXXXXXXXXXXXXXXXQTNKPLWRKLEPEE 170 +RRAGREHGR +G+K R +EK Q N+ W+K PEE Sbjct: 121 DRRAGREHGRLQRDGMKDRFLEKRMIESGDSSGYESGAQNNRSSWKK--PEE 170 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs51332 (318 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2643 352 6e-99 >Vv2643 Length = 319 Score = 352 bits (902), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 185/317 (58%), Positives = 215/317 (67%), Gaps = 3/317 (0%) Query: 2 DSEVTSLAXXXXXXXXXXXVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXXXXXXX 61 DSEVTSLA VYYVQSPSRDSHDGEKTTTSFHSTPVL Sbjct: 6 DSEVTSLAASSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHSHSSVG 65 Query: 62 XXXXXXXXXXXXXXXXXXXRKISPNDASRGGQRKGQKRWNKECDVIXXXXXXXXXXRRSG 121 RKISPNDASRGG RKG+K W KEC VI R+ G Sbjct: 66 RHSRESSSSRFSGSLKPGSRKISPNDASRGGHRKGEKPW-KECAVIEEEGLLEDEERQKG 124 Query: 122 LPRRCYXXXXXXXXXXXXXXXXXXXWGASKSQKPKITMKSINFEHFKIQAGSDFSGVATD 181 LPRRCY WGASK QKPKITMKSI FE F +QAGSD +GVATD Sbjct: 125 LPRRCYFLAFVVGFFVLFSLFSLILWGASKPQKPKITMKSITFERFVVQAGSDSTGVATD 184 Query: 182 MITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTVTVAVM 241 M+++NSTVK+ +RNT TFFGVHVTS PLDLSYS + +ASG I+KFYQSRKS +++T+ +M Sbjct: 185 MVSMNSTVKLTFRNTATFFGVHVTSTPLDLSYSRLRVASGTIKKFYQSRKSHRSLTIVLM 244 Query: 242 GNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIACSITFD 301 G+KIPLYG GA S++++TG+T+ P+PL L+F++RSRAYVLGKLVKPKFYK I CS+ D Sbjct: 245 GDKIPLYGGGA--SLSTSTGTTTEPLPLKLSFMLRSRAYVLGKLVKPKFYKRIECSVNLD 302 Query: 302 PKKLNVPVSLKNSCTYD 318 PKKLNVP+SLK SCTY Sbjct: 303 PKKLNVPLSLKKSCTYQ 319 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78801 (193 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs10052 (145 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11581 (87 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs43283 (270 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs39205 (206 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42863 (115 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv49777 113 8e-28 >Vv49777 Length = 107 Score = 113 bits (283), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 57/95 (60%), Positives = 73/95 (76%), Gaps = 1/95 (1%) Query: 4 GGHRENGRHKADQYKAAQGQWLMHHQPSMKQIMTIMAERDAALQERNLATSEKKAAIAER 63 GG RE R K + Q QWLM Q +M+Q+M I+AERDAA+QERNLA SEKKA +A+R Sbjct: 2 GGDREIRREKVHPHGTTQNQWLMQPQ-TMEQLMAILAERDAAIQERNLALSEKKAVLAQR 60 Query: 64 DMAFLQRDTAIAERNNAILERDNAIASLQYRENSL 98 D+A L+RD AI ER+NA+LERDN I++L+YR NS+ Sbjct: 61 DLAILERDAAIVERDNALLERDNVISTLRYRGNSM 95 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs19328 (197 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv47664 333 1e-93 >Vv47664 Length = 172 Score = 333 bits (854), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 155/172 (90%), Positives = 165/172 (95%) Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60 MS +RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60 Query: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120 TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN++KKWIPELRHYAP VPI+LVGTKL Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPIVLVGTKL 120 Query: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGSPAYIECSSKTQQNVKAVFDA 172 DLR+DKQF IDHPGA PITTAQGE+L+K+IG+ YIECSS TQQNVKAVFDA Sbjct: 121 DLREDKQFLIDHPGATPITTAQGEDLKKMIGAAVYIECSSXTQQNVKAVFDA 172 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs97586 (200 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv26753 187 1e-49 >Vv26753 Length = 213 Score = 187 bits (475), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 93/194 (47%), Positives = 122/194 (62%), Gaps = 1/194 (0%) Query: 5 VKVYGPPLSTAVCRVVACLLEKDVEFQLISLNMAKGDHKKPDFLKIQPFGQVPAFQDEKI 64 +KVYGP + RV+ACL+EK VEF+++ +++ G+ K+PDFL QPFGQVP +D Sbjct: 3 MKVYGPVRAACPQRVLACLVEKGVEFEVVHVDLDSGEQKRPDFLLRQPFGQVPVVEDGDF 62 Query: 65 SLLESRAICRYVCENYPEKGNKGLFGTNPLAKASIDQWLEAEGQSFNPPSSALVFQLALA 124 L ESRAI RY+ Y E+G L G + KA +DQWLE E +FN LV QL + Sbjct: 63 RLFESRAIVRYIAAKYAEQG-PDLLGKSLEEKAVVDQWLEVEAHNFNELVYTLVMQLVIL 121 Query: 125 PRMNIKQDEGVIKQNEEKLAKVLDVYEKRLGESRFLAGDEFSLADLSHLPNAHYLVNATD 184 PRM + D + E+KL KV DVYE+RL +SR+LAGD F+LADLSHLP YLV Sbjct: 122 PRMGERGDLALAHTCEQKLEKVFDVYEQRLSKSRYLAGDSFTLADLSHLPAIRYLVKEAG 181 Query: 185 RGEILTSRDNVGRW 198 ++T R +V W Sbjct: 182 MAHLVTERKSVSAW 195 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs28459 (237 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs126106184 (292 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv11167 523 e-150 >Vv11167 Length = 492 Score = 523 bits (1346), Expect = e-150, Method: Compositional matrix adjust. Identities = 242/292 (82%), Positives = 268/292 (91%), Gaps = 1/292 (0%) Query: 1 MEGFGVLTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIA 60 MEG GV T+TL+NK GK HYVKFHWKPTCGVKCL++ EEA++VGGSNHSHATQDLYDSIA Sbjct: 202 MEGSGVNTYTLINKAGKAHYVKFHWKPTCGVKCLLE-EEAIRVGGSNHSHATQDLYDSIA 260 Query: 61 AGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENE 120 AGNYPEWKL+IQTIDPDHED+FDFDPLDVTK WPEDI+PLQPVGRLVLN+NIDNFFAENE Sbjct: 261 AGNYPEWKLFIQTIDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNRNIDNFFAENE 320 Query: 121 MLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGF 180 LAF P IVVPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++GF Sbjct: 321 QLAFCPAIVVPGVYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGF 380 Query: 181 MNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAP 240 MNFMHRDEEV+YFPSRYDP RHAERYPIP ++TGRREK I KENNFKQPGERYRS+AP Sbjct: 381 MNFMHRDEEVNYFPSRYDPVRHAERYPIPPAILTGRREKCIIPKENNFKQPGERYRSFAP 440 Query: 241 DRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 292 DRQERF+ RW+ AL DPRVT+E+RSIW+SYWSQAD+SLGQKLASRLNVRPSI Sbjct: 441 DRQERFIQRWVDALSDPRVTYEIRSIWISYWSQADKSLGQKLASRLNVRPSI 492 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs22657 (276 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs61780 (173 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv58456 175 3e-46 >Vv58456 Length = 169 Score = 175 bits (444), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 81/170 (47%), Positives = 119/170 (70%), Gaps = 1/170 (0%) Query: 1 MGEVLNIKDEEMIEFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEG 60 M + L + +++ FE G Q +RMNYYPPC KV+G++PHSD LT+L Q+NEV+G Sbjct: 1 MAKNLKVDPGQLMNMFEKGRQQIRMNYYPPCVHASKVIGVTPHSDICGLTLLAQVNEVQG 60 Query: 61 LQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVR 120 LQ+KK+GKWIP+ P+P AFIVNIGD LEI++NG Y+SIEHRAVVN ERLS+A +S Sbjct: 61 LQIKKNGKWIPIRPVPGAFIVNIGDILEIMSNGEYKSIEHRAVVNPETERLSIAAFHSPS 120 Query: 121 YDGEVYPASSLISEKTPPLFRRVRIEEYFRSRYARELRGKSQLDSLRIQH 170 + + P L+ E +++ V EEY++ ++R+L GKS + +++++ Sbjct: 121 VETIIGPLPELVKENG-AIYKSVSREEYYKFAFSRKLDGKSIISHMKLEN 169 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs47542 (355 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv65458 193 4e-51 >Vv65458 Length = 352 Score = 193 bits (491), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 120/324 (37%), Positives = 174/324 (53%), Gaps = 12/324 (3%) Query: 8 LLVPCVQELV---KNPMLVVPPRYICPDEDSPLNSDDTLISQIPVIDMQ--XXXXXXXXX 62 LL VQE+V ++P P YIC D D + +L S IP+ID+ Sbjct: 12 LLAKRVQEMVLKGEDP----PQPYICRDGDGSEDVSSSL-SPIPIIDLSLFSSSAPETTE 66 Query: 63 XXXAKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFG 122 KL A WG FQ HG+S++FL+++++ K FF +EEKKK + + EG+G Sbjct: 67 KELQKLKSALSSWGCFQATGHGISTSFLDEIRQVTKEFFEQPIEEKKKISKGVEEFEGYG 126 Query: 123 QAFVVSEEQKLDWADIFSMITLPVXXXXXXXXXXXXXXXXDTLEVYSMELKSLAMNLISK 182 E Q LDW+D + P D LE Y++++K + + Sbjct: 127 ADPTPEEGQYLDWSDRVFLDVYPEDLRKYKFWPESPNSFRDVLENYTIKMKIVTEMISKA 186 Query: 183 MGKVLNIKDEE-LREFFENGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVE 241 M K LN++++ L +F E G R NYY C +P+ V+GL PH+DGS TILLQ NEV+ Sbjct: 187 MAKSLNLEEKCFLNQFGERGALQARFNYYSRCLRPDIVLGLKPHADGSGYTILLQ-NEVD 245 Query: 242 GLQIKNDGKWIPITPLPNAFIVNIGDTLEIITNGTYRSIEHRAIVNSLQERLSIATFYTK 301 GLQI D W+ I + NA +V +GD +EI++NG ++S HR + +S +ER+S+A FYT Sbjct: 246 GLQILKDDCWLTIPTISNALLVLMGDQMEIMSNGIFKSPVHRVLASSERERISVAVFYTP 305 Query: 302 RLDGEIYPASSLISEKTPALFRRV 325 I P LI E+ P LF++V Sbjct: 306 ESGKLIGPEEGLIDEERPRLFKKV 329 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41683 (117 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42594 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv25706 141 7e-36 >Vv25706 Length = 156 Score = 141 bits (355), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 75/122 (61%), Positives = 86/122 (70%), Gaps = 9/122 (7%) Query: 1 MKGGKSKSD-----TTNAKLSVNXXXXXX----XXXXXXXXXDPNKPKRPASAFFVFMEE 51 MKGGKSK+ +NA+LSV DPNKPKRPASAFFVFMEE Sbjct: 1 MKGGKSKAAEVKRADSNARLSVKKKGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEE 60 Query: 52 FREQYKKDHPKNKSVAAVGKTGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQA 111 FR+QYK+ HP NKSV+ VGK GG+KWKS+SEA+KAPYVAKAEKRK EY K M+ YN+R A Sbjct: 61 FRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMA 120 Query: 112 EG 113 EG Sbjct: 121 EG 122 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52127 (177 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv11764 231 6e-63 >Vv11764 Length = 416 Score = 231 bits (589), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 116/158 (73%), Positives = 131/158 (82%), Gaps = 4/158 (2%) Query: 1 MQGWHAQRLFGHGEVAEPIIKDKSLPSPARREKQLKNIGLPKNR---TLDSAEKAALTEA 57 MQGWH+QRL G+GEV +PIIKDKS S +REKQLKNIGL K + L+ A KAA T+A Sbjct: 250 MQGWHSQRLLGNGEVGDPIIKDKSSISLQKREKQLKNIGLLKRKKPSNLEHAVKAARTKA 309 Query: 58 DK-QIITEIVDVGPPADWVKINVREAKDCYEVYALVPGLFREEVRVQSDPAGRLVITGEP 116 K Q+ T +VD+GPPADWVKINVR KDC+EVYALVPGL REEVRVQSDPAGRLVITGEP Sbjct: 310 AKPQLDTAVVDIGPPADWVKINVRRTKDCFEVYALVPGLLREEVRVQSDPAGRLVITGEP 369 Query: 117 EQVDNPWGITPFKKVVILPSRIDPLQTFAVVSLHGRLY 154 E DNPWG+TPFKKVV LPSRIDP QT AVV+LHG+L+ Sbjct: 370 EHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLF 407 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs49233 (326 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv22766257 123 4e-30 >Vv22766257 Length = 356 Score = 123 bits (309), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 16/289 (5%) Query: 28 DVKALNEIKASLGWRVVYAWVXXXXXXXXXXXXWSGVTCSTQG-----DYRVVTELEVYA 82 D +AL + KA+L Y + W G++C + G + R +E ++ Sbjct: 25 DRQALLDFKAAL--NEPYLGIFKSWSGNDCCSSWFGISCDSAGRVADINLRGESEDPIFE 82 Query: 83 VS-----IVGPFPIAVTNLLDLTRLDLHNNK-LTGPIPPQIGRLKRLRILNLRWNKLQDV 136 + + G ++ L LT L + + K ++G IPP I L +LRIL+L NK+ V Sbjct: 83 RAGRSGYMTGAISPSICKLDSLTTLIIADWKGISGEIPPCISSLSKLRILDLVGNKITGV 142 Query: 137 IPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFR 196 IPA+IG+L+RLT L+++ N+ G IP + NL L +L L+ N++TG IP + G L Sbjct: 143 IPADIGKLQRLTVLNVADNSISGGIPASVVNLASLMHLDLRNNQITGGIPQDFGKLTMLS 202 Query: 197 HLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXXTGGVPAQLANLTNLEILYLSHNKM 256 +G N L GTI I G + + +G +PA+L ++ L L L N++ Sbjct: 203 RAMLGRNQLTGTIPSSI--SGLYRL-ADFDLSVNQISGVIPAELGSMPVLSTLNLDSNRL 259 Query: 257 SGTIPLALAHIPKLTYLYLDHNQFSGRIPDAFYKHPFLKEMYIEGNAFR 305 SG+IP +L L L L N G++PD F + + + N + Sbjct: 260 SGSIPASLLSNTGLNILNLSRNSLEGKLPDVFGSKTYFIGLDLSYNNLK 308 Score = 104 bits (259), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/243 (32%), Positives = 107/243 (44%), Gaps = 33/243 (13%) Query: 62 SGVTCSTQGDYRVVTELEVYAVSIVGPFPIAVTNLLDLTRLDLHNNKLTGPIPPQIGRLK 121 +GV + G + +T L V SI G P +V NL L LDL NN++TG IP G+L Sbjct: 140 TGVIPADIGKLQRLTVLNVADNSISGGIPASVVNLASLMHLDLRNNQITGGIPQDFGKLT 199 Query: 122 RLRILNLRWNKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRL 181 L L N+L IP+ I L RL LS N G IP E+ ++P L L L NRL Sbjct: 200 MLSRAMLGRNQLTGTIPSSISGLYRLADFDLSVNQISGVIPAELGSMPVLSTLNLDSNRL 259 Query: 182 TGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXXTGGVPAQLA 241 +G IP L L++ N L G + P Sbjct: 260 SGSIPASLLSNTGLNILNLSRNSLEGKL---------------------------PDVFG 292 Query: 242 NLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHNQFSGRIPDAFYKHPFLKEMYIEG 301 + T L LS+N + G IP +L+ + +L L HN G IP + PF ++E Sbjct: 293 SKTYFIGLDLSYNNLKGQIPKSLSSAAYIGHLDLSHNHLCGSIPTGW---PF---DHLEA 346 Query: 302 NAF 304 ++F Sbjct: 347 SSF 349 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs74261 (193 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv6266261 159 4e-41 >Vv6266261 Length = 425 Score = 159 bits (401), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 74/135 (54%), Positives = 104/135 (77%), Gaps = 1/135 (0%) Query: 60 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLK 119 L PELL ++I+R+E +E +WP R++VVACA VC+ WRE+ K+IVKSP SGK+TFP LK Sbjct: 56 LPPELLRDVIKRLEASESTWPSRKHVVACAAVCRSWREMCKEIVKSPEFSGKLTFPISLK 115 Query: 120 QPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRRGAHSEYIISLDA 178 QPGPR+ QC I+R+K T++L+L L+P+ E GKFLL+A+R RR +EY+IS+DA Sbjct: 116 QPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRNRRTTCTEYVISMDA 175 Query: 179 GDLSQGSNAYVGKLR 193 ++S+ S+ Y+GKLR Sbjct: 176 DNISRSSSTYIGKLR 190 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs38375 (183 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv50341 133 2e-33 >Vv50341 Length = 194 Score = 133 bits (334), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 67/147 (45%), Positives = 96/147 (65%), Gaps = 2/147 (1%) Query: 1 MRPNNILLTHDFEPLVGDFGLARWQXDG-DMGVETRVMGTFGYLAPEYAQSGQITEKADV 59 +P+NILL +F V DFGLA+ D + + TRV+GT GYLAPEYA SG++T K+DV Sbjct: 23 FKPSNILLDQNFRAKVSDFGLAKTSSDKINSQIPTRVIGTTGYLAPEYASSGKLTTKSDV 82 Query: 60 YSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARP-LLEEYAIDELVDPRLGNHYSEHEVY 118 YS+GVVL+EL+TGR +D RP G+ L WA P L + E+VDP L HYS+ ++ Sbjct: 83 YSYGVVLLELLTGRVPLDTKRPPGEDVLVSWALPRLTNRQKLVEMVDPALQGHYSKKDLI 142 Query: 119 CMLHAASLCIRRDPHSRPRMSQVLRIL 145 + A++C++ + RP M+ V++ L Sbjct: 143 QIAAIAAVCVQHEADYRPLMTDVVQSL 169 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs77012 (108 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv40104 148 2e-38 >Vv40104 Length = 163 Score = 148 bits (374), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 75/112 (66%), Positives = 90/112 (80%), Gaps = 7/112 (6%) Query: 1 MCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNP 60 MCKG+VI+RIQAS+S E K IYLGDGSGD+CPSLKL GD+VMPRKNFPLWDLI RNP Sbjct: 42 MCKGMVIKRIQASISTE---KFIYLGDGSGDFCPSLKLGSGDYVMPRKNFPLWDLICRNP 98 Query: 61 MLIKAEIHEWTDGEELEQILLHLVNTI----GSTNNNNSAQLLSADCKLQTI 108 LIKAE+HEW+DGEELE LLHL+ I + N++ +AQL+S DCK +T+ Sbjct: 99 NLIKAEVHEWSDGEELEHGLLHLIKKISEENNANNSSAAAQLISVDCKFETM 150 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs12574 (220 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82250 (371 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67211 (534 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv36389 505 e-145 >Vv36389 Length = 542 Score = 505 bits (1301), Expect = e-145, Method: Compositional matrix adjust. Identities = 298/539 (55%), Positives = 346/539 (64%), Gaps = 34/539 (6%) Query: 17 VNRRSKLLPSLFCGCSSSRTAAVEMEEYSDKNEVSSSECRHPLINAAQNPPVSSLVSSTG 76 +NRR L SL CG S+SR A E+E+ + V++ E P+ + S L SS G Sbjct: 17 LNRR---LSSLICGGSTSR-AQPEIEDCPAELLVNAIEHNDPVTVEQSSTKESHLASSAG 72 Query: 77 TQFXXX----XXXXXXXXXXXXXXXYAEDGRRNGGPDNHGKGLADSKELVPPCLVSDDSS 132 T F + D N N GK L++SKEL+PP LVSD+ S Sbjct: 73 TAFTSTRTETGTSSESSSAAREDTSFIND-LSNIETSNRGKCLSESKELIPPHLVSDEPS 131 Query: 133 PNEYYRDRSGTTASTSFKDQESSESVSVNDSANKNAVN-------GIENPAEGV----SQ 181 + Y +RS AS SFKD + VS N AN AVN N GV S Sbjct: 132 QVDPYWERSSNIASASFKDLHPLDPVSANARANMGAVNVHNSMDKDRSNSGAGVIHSSSS 191 Query: 182 IGPEPSCSYSQSLEDSASAEVSVETHESEVIPVHNSHSDPVSLASDIPVAFHSLGEESIR 241 PE SYS D ASAE H S V + NS S V +D PV HS G+ESI+ Sbjct: 192 HAPEHRASYS----DGASAE----NHVSGVSAIDNSSSVSVPAVTDSPVTLHSQGDESIQ 243 Query: 242 GALPGGLGFLLSNR---DQDRVDGNVLHVDVVSISSNILSRGNADTDNREARRNXXXXXX 298 A+P GLG ++S+R ++ R DG+VLHVDVVSISSNILS A+ NREARRN Sbjct: 244 EAIPSGLGIVVSDRADRERGRRDGSVLHVDVVSISSNILSSTTAEVSNREARRNSRRLFW 303 Query: 299 XXXXXXXXXXLTDSPTIVFSTDDTGDLGSHDRWLLDFSGDYFDDGVGGDSGYLGRRVHSL 358 +DSPTIVFSTDDT DLGSHDRWLLDFSGD+F+DGVGGDSGYLG R+HS+ Sbjct: 304 DAFSRRSSRRHSDSPTIVFSTDDTDDLGSHDRWLLDFSGDFFEDGVGGDSGYLGSRIHSM 363 Query: 359 NERRRHSRSEIWERLRAGLDENSRRTTFCPSGLHPDGTCSCESFVMSEDSGTRA-ISRIV 417 NERR HSRSEIWERLR GLDE+SRRTT CP+GLHPDG CSC+SF+M+E+S TRA ISRIV Sbjct: 364 NERRWHSRSEIWERLRGGLDESSRRTTTCPTGLHPDGMCSCDSFLMAEESSTRASISRIV 423 Query: 418 MLAEALFEVLDEIHRQPXXXXXXXXXXPAPESVVDSFPIKSHKKGDKAEGGVEPDQCYIC 477 MLAEALFEVLDEIHRQP PAPESVVDSFP+K+HKK D A+ G + QCYIC Sbjct: 424 MLAEALFEVLDEIHRQPVSLALSMVSLPAPESVVDSFPLKNHKKADTAQSGEDVAQCYIC 483 Query: 478 LAEYEEGDRIRLLPCHHEYHMSCVDKWLKEIHGVCPLCRRDVRQGAT--ESSNSEIPSV 534 LAEYEEGD+IR+LPCHHEYHMSCVDKWLKEIHGVCPLCR DVR+G T SN E PS+ Sbjct: 484 LAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVREGLTGGSVSNGETPSL 542 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs14331 (105 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59112 (265 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv9863 236 5e-64 >Vv9863 Length = 332 Score = 236 bits (601), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 128/266 (48%), Positives = 165/266 (62%), Gaps = 4/266 (1%) Query: 1 MEVERVQAIASLSHSNGTIPAEFVRPEKEQPASATYHGPAPEIPTIDLDDPVQDRLVRSI 60 MEVERVQA+AS + N +PA+F+RP E+P + T +P I L + D LV+ I Sbjct: 1 MEVERVQALASGADLN-ELPAKFIRPAHERPEN-TKPLEGVSVPVISLAES-HDVLVKEI 57 Query: 61 AEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQ 120 +A EWG F + +HGI LI KLQ VG EFF+ PQEEKE Y+ +GYGTK+ Sbjct: 58 YKACSEWGFFLLKDHGISPGLIEKLQEVGIEFFKQPQEEKEKYANDPSTGKFEGYGTKMT 117 Query: 121 KEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXX 180 K ++ K WVD+ FH + PPS++N++ WP P SYR V E Y K + +V D L Sbjct: 118 KNLDEKVEWVDYFFHLMSPPSNVNHQIWPQTPSSYREVTEVYNKELLKVTDTLLELLSEG 177 Query: 181 XXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQV 240 K GGD+IE +KIN YPPCP+P LALGV HTD+SALT+LVPN+VPGLQV Sbjct: 178 LGLEGKVLKSHVGGDEIELEMKINMYPPCPQPQLALGVEPHTDMSALTLLVPNDVPGLQV 237 Query: 241 FKDDRWIDAKYIPTLSSSHRG-QIEI 265 +KDD W+ Y+P H G QIE+ Sbjct: 238 WKDDYWVAVDYLPNALFVHVGDQIEV 263 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs98 (157 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs38000 (392 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs56536 (291 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs85578 (430 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs95552 (262 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv10475 88 2e-19 >Vv10475 Length = 184 Score = 88.2 bits (217), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 95/200 (47%), Gaps = 29/200 (14%) Query: 2 MKKKMKGVAASVEIAPAPACSVYDDPRVRLRHQSLKQDYXXXXXXXXXXXXXXXXXXXXX 61 M KKMK + +E +P +VY+D + R +HQSL QD+ Sbjct: 1 MSKKMKRMV--MESSP---HAVYEDAKSRFKHQSLLQDFHELQKETEAMKKKLQSVNLNK 55 Query: 62 XXXXSEVRFLRRRHQYLTANKPSTSTMGQNSVKAQQKPIPSRKMAKERNY-GRKAAALCR 120 +EVRFLRRR++YL N + + Q + + +E+N+ G++AAA+ Sbjct: 56 LTLLAEVRFLRRRYKYLLKNMAPKTPPEPELKQPQNSATQLKNITREKNHSGKQAAAM-- 113 Query: 121 PPLGFDLNKKGKAYNEKEATLRNPIPVFDLNQKLKAYNGKESTSLHSLPVLDLNQKERVY 180 RNP PVF N K + + GK + + P +LNQK R Y Sbjct: 114 ---------------------RNPAPVFGGNMKERIHKGKVAALPNPDPGYELNQKTRGY 152 Query: 181 SRKDAAIQNMTPVFDLNQIS 200 S K+AA++N PVFDLN+IS Sbjct: 153 SGKEAALRNPVPVFDLNKIS 172 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs91435 (149 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs5331 (217 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs79000 (88 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs105603 (271 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv21666261 310 2e-86 >Vv21666261 Length = 247 Score = 310 bits (794), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 149/233 (63%), Positives = 171/233 (73%), Gaps = 1/233 (0%) Query: 1 MFRXXXXXXXXXXXXXXXXSIPILWAGIWLSNKGVTECEKFLDKPVIILGVFLMIVSLAG 60 MFR S+PIL AGIWLS++ T+CEKFL+KPVI LGVFLM+VSLAG Sbjct: 1 MFRLSNNLVGILNFITFLLSVPILGAGIWLSHRASTDCEKFLEKPVIALGVFLMVVSLAG 60 Query: 61 LIGACCRISWLLWVYXXXXXXXXXXXXXXTIMAFVVTNKGAGEVLSGRGYKEYRLGDYSD 120 LIGACCR+SWLLWVY TI AFVVTNKGAGEVLSG+GYKEYRLGDYS+ Sbjct: 61 LIGACCRVSWLLWVYLLVMFLLIVLLFCFTIFAFVVTNKGAGEVLSGKGYKEYRLGDYSN 120 Query: 121 WLQKRVNNTKNWNKIKSCLIDSKVCSSFHDKYLNDTVEQFYSEHLSSVQSGCCKPSNDCG 180 WLQKRVNNTKNWN+IKSCL D KVC S + +TV+QFY+E LS +QSGCCKPSNDCG Sbjct: 121 WLQKRVNNTKNWNRIKSCLQDGKVCQSLSQDKVGETVQQFYAEQLSPIQSGCCKPSNDCG 180 Query: 181 FNYAGPTQWTKGNTSS-TNPDCGAWGNDASTLCYNCQSCKAGLLDQLKSDWKK 232 F Y PT WT N ++ TN DC W N+ S LC+NCQ+CKAG+LD LK DW+K Sbjct: 181 FTYVTPTNWTSTNAATYTNSDCSLWNNEPSILCFNCQACKAGVLDNLKRDWEK 233 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs39278 (181 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv61185 142 5e-36 >Vv61185 Length = 361 Score = 142 bits (357), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 92/185 (49%), Positives = 103/185 (55%), Gaps = 21/185 (11%) Query: 2 DSVVPVQTTKPEXXXXXXXXXXXLINNENCFDIDFCRSKLXXX--XXXXXXXXXXXLDVG 59 D VVPVQ P +NCF++DF RSKL DVG Sbjct: 193 DGVVPVQAKDPSPPVTNHPA-------DNCFELDFSRSKLSAYNYTAQSLSQSISSSDVG 245 Query: 60 VVPDGN--SMSDISYTFGRNMSTGSGADPSVTVSAPGANQASQLCGIDREARVLRYREKR 117 VVPDGN SMSD SY + +S +QA+QL G+DREARVLRYREKR Sbjct: 246 VVPDGNCNSMSDTSYPSMKQVSG-------GGGGGSTGSQATQLSGMDREARVLRYREKR 298 Query: 118 KNRKFEKTIRYHSRKAYAETRPRIKGRFAKRAEADSE-VDRLYKXXXXXXXXXXXXXQYG 176 KNRKFEKTIRY SRKAYAETRPRIKGRFAKR E +SE VD +Y YG Sbjct: 299 KNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMESEMVDHIYNSASAAAFMVDAG--YG 356 Query: 177 VVPSF 181 VVPS+ Sbjct: 357 VVPSY 361 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44750 (282 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100106185 (135 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv30393 155 2e-40 >Vv30393 Length = 160 Score = 155 bits (393), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 78/135 (57%), Positives = 98/135 (72%), Gaps = 2/135 (1%) Query: 1 MEKFTTPSRSPHQETNKSKGVSSIPVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLV 60 ++KF PSRS H T++ KG+S+IP DI+D+PK+Y+F+MDVPG KSDIQVTVED+ TLV Sbjct: 28 IDKFAFPSRSHH--THEHKGLSTIPTDIMDTPKEYLFYMDVPGLCKSDIQVTVEDDNTLV 85 Query: 61 IRSNXXXXXXXXXXXXXXXIRLERRVPQKLLRKFKLPEDANVSAISAKCENGVLTIVVEK 120 IRS+ +RLERR PQKL+RKF+LPE+AN SAISAKCENG LT+V+EK Sbjct: 86 IRSHGKRKREDGEEEGCKYVRLERRAPQKLMRKFRLPENANTSAISAKCENGALTVVIEK 145 Query: 121 LXXXXXXXTVEVAIS 135 TVEV I+ Sbjct: 146 HPPPPKSKTVEVTIA 160 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs662 (104 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs26023 (194 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25616 (265 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv25403 271 8e-75 >Vv25403 Length = 259 Score = 271 bits (693), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 131/180 (72%), Positives = 146/180 (81%) Query: 86 YFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVE 145 YFPYEPGKQ RSA+ +KN S+SH+AFKFQTTAPKSCYMRPPGG+LAPG+S+IATVFKFVE Sbjct: 80 YFPYEPGKQVRSAISIKNISRSHLAFKFQTTAPKSCYMRPPGGILAPGESLIATVFKFVE 139 Query: 146 APENNERQPLDQKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVERILRVVFLNAERPS 205 PENNE+ +DQKSK KFKIMSLKVKG +DYVPELFDEQKDQV E+ILRVVFL+ ERPS Sbjct: 140 HPENNEKPAVDQKSKVKFKIMSLKVKGEMDYVPELFDEQKDQVAEEQILRVVFLDTERPS 199 Query: 206 PXXXXXXXXXXXXXXXXXXXXXPPPDTGPRVVGEGLVIDEWKERREKYLARQQVEAVDSV 265 P PP DTGPR+VGEGLVIDEWKERRE+YLARQQVE +DSV Sbjct: 200 PPLEKLKRQLAEAEAALEARKKPPEDTGPRIVGEGLVIDEWKERRERYLARQQVEGIDSV 259 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78642 (63 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs1445 (284 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs12237 (265 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs89842 (211 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs137106189 (100 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv22966261 86 2e-19 >Vv22966261 Length = 89 Score = 85.5 bits (210), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/92 (55%), Positives = 67/92 (72%), Gaps = 5/92 (5%) Query: 7 SKAKQVSYNKEPSISSFKFQVLSSINMSDTCGNCDCADRSQCVKKGSSYAADFVETDLSF 66 SK ++ K P ++S Q L S MS TCGNCDCAD+SQ KKG++Y D VET+ S+ Sbjct: 2 SKQYPQTHLKTPCLTSDFPQFLRS-TMS-TCGNCDCADKSQ--KKGNAYGIDIVETEKSY 57 Query: 67 VSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 98 V+TVV M+V AA+ EG+CKCG +CAC++CTCG Sbjct: 58 VATVV-MEVPAAQHEGSCKCGDSCACIDCTCG 88 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs2618 (306 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44282 (125 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv65578 123 1e-30 >Vv65578 Length = 265 Score = 123 bits (308), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 62/103 (60%), Positives = 69/103 (66%), Gaps = 1/103 (0%) Query: 2 GVAHVVNLDLPKTVEDYVHRIGRTGRGGSMGQATSFYTDRDMLLVAQIKKAIVDAESGNA 61 GVAHV+NLDLPK +E+YVHRIGRTGR GS GQATSFYTDRD+ LVA I+KAI D SGN Sbjct: 162 GVAHVINLDLPKAMENYVHRIGRTGRAGSTGQATSFYTDRDVFLVAHIRKAIADVGSGNT 221 Query: 62 VAFATXXXXXXXXXXXXXXXXXXXXXTSKLSMMGP-SVNIEDK 103 VAFAT S LS+MGP S+NIE K Sbjct: 222 VAFATGKVARRKEREAAAAQKEARIALSNLSLMGPTSLNIERK 264 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs9399 (224 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82816 (136 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs27337 (167 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs32211 (293 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs92457 (274 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv54245 435 e-124 >Vv54245 Length = 270 Score = 435 bits (1118), Expect = e-124, Method: Compositional matrix adjust. Identities = 206/270 (76%), Positives = 239/270 (88%) Query: 1 MSLLPKGDSIQIREVWSDNLELEFDLIRKIVDDYPYVAMDTEFPGIALRPVGSFKSSYEY 60 MS + D+ IR+VW DNLE E LIR ++DDYPY+AMDTEFPG+ LR VG+FK++ EY Sbjct: 1 MSDVLVNDTFHIRDVWDDNLEDEIRLIRGLLDDYPYIAMDTEFPGVVLRSVGNFKNNNEY 60 Query: 61 HYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIEL 120 ++QTLK+NVD+LKLIQLGLTFSDE+GN PTCGT++YCVWQFNFREF++NED+FA+DSIEL Sbjct: 61 NFQTLKTNVDLLKLIQLGLTFSDEHGNFPTCGTERYCVWQFNFREFNLNEDVFAHDSIEL 120 Query: 121 LKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLP 180 LKQSGI+F KNNE G+DA RF EL+MSSGIVL+DS+HWVTFHSGYDFGYLLKLLT QNLP Sbjct: 121 LKQSGIDFKKNNEKGVDARRFSELLMSSGIVLNDSVHWVTFHSGYDFGYLLKLLTSQNLP 180 Query: 181 DTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTA 240 +TQ FF LIRIYFP +YDIKHLMKFCNSLHGGLNKLAELL VER+G CHQAGSDSLLT Sbjct: 181 ETQAGFFELIRIYFPILYDIKHLMKFCNSLHGGLNKLAELLGVERIGSCHQAGSDSLLTC 240 Query: 241 STFRKLKENFFSSSLEKYAGVLYGLGVENG 270 TF KLK++FF+ S EKYAGVLYGLGVE+G Sbjct: 241 CTFMKLKKDFFNGSPEKYAGVLYGLGVESG 270 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs29929 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv44223 85 6e-19 >Vv44223 Length = 263 Score = 85.1 bits (209), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 84/135 (62%), Gaps = 11/135 (8%) Query: 10 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSAS 69 +A++YP ++ S + VDN MQL+ P+QFD +VT N++G+++++ A+ I G G++P + Sbjct: 115 VATKYPGIKYSEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGN 174 Query: 70 LGESGPGLFEPIHGSAPDIAG------QDKANPLATILSAAMLLKYGLGEEHAAKRIEKA 123 +G + +FE G++ G Q KANP+A +LS+AM+L++ L A R+E A Sbjct: 175 VG-ADHAVFE--QGASAGNVGHQKLVEQKKANPVALLLSSAMMLRH-LQFPSFADRLETA 230 Query: 124 VLDTLDKG-LRTGDI 137 V + +G RT D+ Sbjct: 231 VKRVISEGKYRTKDL 245 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18655 (147 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs55982 (168 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88949 (156 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs47688 (226 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs10102 (280 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs40482 (115 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv37731 184 3e-49 >Vv37731 Length = 359 Score = 184 bits (468), Expect = 3e-49, Method: Composition-based stats. Identities = 84/103 (81%), Positives = 90/103 (87%) Query: 1 MDGAPYLRKVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGS 60 MDGAPYLRKVDL+ YS Y ELSSALEKMFSCFTIGQ SHG PG++ LSES+L DLLHGS Sbjct: 246 MDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGAPGREMLSESKLKDLLHGS 305 Query: 61 EYVLTYEDKDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLG 103 EYVLTYEDKDGDWMLVGDVPW MF ETC+RLRIMK +AIGL Sbjct: 306 EYVLTYEDKDGDWMLVGDVPWQMFIETCKRLRIMKSCDAIGLA 348 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs77124 (182 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv35377 124 1e-30 >Vv35377 Length = 84 Score = 124 bits (311), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 55/67 (82%), Positives = 65/67 (97%) Query: 80 TAQEIQELVRGERNVPIIIDFYATWCGPCILMAQEIELLAVEYESSAMIVKVDTDDEYEF 139 +A+E+QELV+ ER VP+IIDFYATWCGPCILMAQE+E+LAVEYES+A+IVKVDTDDEYEF Sbjct: 2 SAKEVQELVKEERTVPLIIDFYATWCGPCILMAQELEMLAVEYESNALIVKVDTDDEYEF 61 Query: 140 ARDMQVR 146 ARDMQV+ Sbjct: 62 ARDMQVK 68 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88183 (323 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs17782 (216 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv36536 91 1e-20 >Vv36536 Length = 161 Score = 91.3 bits (225), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 11/130 (8%) Query: 4 GEEKSSNFYAVLGLNKECTATELRNAYKKLALRWHPDRCSASGNAKFVDEAKKKFQTIQH 63 G S +Y+VLG+ ++ +++++R AY+KLAL+WHPDR + N EAK++FQ IQ Sbjct: 5 GGSAGSCYYSVLGIRRDASSSDIRTAYRKLALKWHPDRWAK--NQALAGEAKRRFQQIQE 62 Query: 64 AYSVLSDANKRLLXXXXXXXXXXXXXXXXXXXFLNEMAAMMSQTQTNENGEE--TFEELQ 121 AYSVLSDA+K+ + F+ EM +MM N G+E + E+LQ Sbjct: 63 AYSVLSDASKKSM--YDAGFYDPMEEDQDFCDFMQEMVSMM-----NNVGDEPDSVEDLQ 115 Query: 122 NLFEEMFQGD 131 +F +M GD Sbjct: 116 KMFVDMVSGD 125 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs56537 (193 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs56128 (204 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs103996 (236 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv19272 262 4e-72 >Vv19272 Length = 242 Score = 262 bits (670), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 127/203 (62%), Positives = 149/203 (73%) Query: 3 TERKKQELRHLGFMRIAAIQALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQK 62 E +K+EL+HLGF+RIAAIQALVCVS+LY YAK+NSGPLRS VG VE AVTAV+ PVY K Sbjct: 4 CEMEKRELKHLGFVRIAAIQALVCVSNLYYYAKQNSGPLRSTVGAVEDAVTAVISPVYDK 63 Query: 63 FKGVPXXXXXXXXXXXXEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGG 122 FKGVP E S KFD+HAPP+AK V Q L+ AS+ AQ LVSEA+ GG Sbjct: 64 FKGVPDHLLVFMDKKVDEVSAKFDKHAPPVAKEVVGQAQCLVLKASKTAQTLVSEAKAGG 123 Query: 123 PRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTK 182 P AA+ +AA K ++T VK W+ LN LFHT+ADMAVPTAA WS KYNH+V +M+ Sbjct: 124 PSAALQHAATAYKLFMLTQLVKLWFILNKVPLFHTVADMAVPTAAHWSDKYNHVVTDMSV 183 Query: 183 KGYTVFGYLPLVPIDDIAKAFKQ 205 KGYT+FGY PLVPID IAK FKQ Sbjct: 184 KGYTIFGYFPLVPIDKIAKTFKQ 206 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64687 (287 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4708 74 2e-15 >Vv4708 Length = 471 Score = 74.3 bits (181), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 91 YCLCKQGLSQSVLQKAIDYACGAG-ADCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQ 149 +C+ + LQ A+DYACG G ADC PI C++PNT++ H ++A NSY+Q+KG+ Sbjct: 383 WCVANGETGKEKLQAALDYACGEGQADCHPIQPGATCYDPNTLEAHASFAFNSYYQKKGR 442 Query: 150 TPGSCDF 156 G+CDF Sbjct: 443 VIGTCDF 449 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs31178 (112 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs102106185 (119 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs76075 (343 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs43787 (278 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs99914 (157 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv43002 115 6e-28 >Vv43002 Length = 213 Score = 115 bits (287), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 58/113 (51%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 41 GCFDHHCPPKLRYTFNDLVRLANNSPFTINEVEALYELFKELSSSLIDDGLIHKEELRLA 100 GCF K D V LA+ + F+++EVEAL+ELFK +SSS+IDDGLI+KEE +LA Sbjct: 2 GCF-QSTARKQFPGHEDPVILASQTAFSVSEVEALFELFKSISSSVIDDGLINKEEFQLA 60 Query: 101 LLKTTSGENLFPDRVFDLFDEKKNGVIEIEEFVRALSIFHPSTPLEGQMTLHF 153 L K ENLF +R+FDLFD K+ GVI+ +FVR+L++FHP+ P E ++ F Sbjct: 61 LFKNRKKENLFANRIFDLFDVKRKGVIDFGDFVRSLNVFHPNAPQEDKIDFSF 113 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93563 (164 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv54718 300 1e-83 >Vv54718 Length = 350 Score = 300 bits (767), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 142/163 (87%), Positives = 152/163 (93%) Query: 2 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLG 61 RDFEVMKKTHYYLVDTS IIPGAAVSELQFNII EEPF V DLK+ PLPVWHG GYRSLG Sbjct: 188 RDFEVMKKTHYYLVDTSVIIPGAAVSELQFNIIHEEPFIVHDLKVIPLPVWHGPGYRSLG 247 Query: 62 FRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKR 121 FRFGNICYISDVSEIPEETYP L++CEIL++DALRPDRSS+THFGLPRAL+EVRKIQPKR Sbjct: 248 FRFGNICYISDVSEIPEETYPLLKNCEILVLDALRPDRSSATHFGLPRALDEVRKIQPKR 307 Query: 122 TLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML 164 TLF GMMHLMDHEKV+E+L KL +TEGLDVQLSYDGLRVPV L Sbjct: 308 TLFTGMMHLMDHEKVSEDLEKLKKTEGLDVQLSYDGLRVPVTL 350 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4405 (186 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs876 (205 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs61313 (70 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs34817 (202 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs37806 (239 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv49949 290 1e-80 >Vv49949 Length = 228 Score = 290 bits (743), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 161/243 (66%), Positives = 173/243 (71%), Gaps = 32/243 (13%) Query: 1 MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQR 60 MSCNGCRVLRKGCSESCILRPCLQWIES ESQGHATVFVAKFFGRAGLMSFISAVPE+QR Sbjct: 1 MSCNGCRVLRKGCSESCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISAVPENQR 60 Query: 61 PALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCGGS 120 PALF+SLLYEACGRTVNPVNGAVGLL TGNWHVCQAA+ETVLRGGTLR +PELLN G Sbjct: 61 PALFRSLLYEACGRTVNPVNGAVGLLGTGNWHVCQAAMETVLRGGTLRAMPELLN---GV 117 Query: 121 PTPTSDDVSEAEVTCTDMSRLQDXXXXXXXXXXXXXXXXXXXXXXXXXEESAMKLQQSDL 180 TP D+ SEAEVTCTDM +L+D E A K+Q +DL Sbjct: 118 STPECDEASEAEVTCTDMFKLRDPNSSSRSKVPKRKRL-----------EEASKVQCTDL 166 Query: 181 DLRLTPRXTGKVP----------PEVKRRPGTPSMNSGGSGTTTCLESGVTDPPYPHGAE 230 DLRLTP TGK+ PE RRPGTPSMNS S TTTC E+ PH E Sbjct: 167 DLRLTPGLTGKISSRGLGAMSYLPET-RRPGTPSMNSEESVTTTCFET-------PHSPE 218 Query: 231 EEK 233 E+ Sbjct: 219 GER 221 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs65146 (173 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33157 (179 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv1866260 182 3e-48 >Vv1866260 Length = 180 Score = 182 bits (462), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 100/184 (54%), Positives = 127/184 (69%), Gaps = 15/184 (8%) Query: 6 VDQWTVTKPSRSDEVLDAVEQVRIANQVRAQIDSMAPKRPTKPNRSEPDFIAPTNDQS-A 64 V QWTVTKP RSDEVL+A +Q RI Q+RA DS+ PKRP KP+RSE D +P + S A Sbjct: 2 VGQWTVTKPGRSDEVLEADQQQRITAQIRAHFDSITPKRPAKPSRSESD--SPLSSPSHA 59 Query: 65 ANGNIPELDKLRSLQSQSH--VGVIYSAEVNNTAQDEFVETQYYNQLVSIDKDHHTTGTG 122 ANG IPEL K R+LQSQS + S + + Q+EFVET YY +L SIDK HHTTGTG Sbjct: 60 ANGTIPELHKFRTLQSQSQSESHAMISTDGSGMLQEEFVETHYYKELGSIDKQHHTTGTG 119 Query: 123 FIRVANEG--NGYNIRVGKGCDSGDRPV----YKSNPATNDWIPSVEYDQ-AFISSKPNR 175 FI+V G +GY +++ + +R + +KSNPATNDWIPS+E D+ ++SSKP+R Sbjct: 120 FIKVERRGVEDGYGLQLQR---RENREMMLRGFKSNPATNDWIPSLEEDEVGYVSSKPSR 176 Query: 176 SEGC 179 SE C Sbjct: 177 SESC 180 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69044 (275 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs99071 (150 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs54021 (255 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv49087 358 e-101 >Vv49087 Length = 362 Score = 358 bits (918), Expect = e-101, Method: Compositional matrix adjust. Identities = 174/254 (68%), Positives = 200/254 (78%) Query: 1 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60 M ++PE+EHP AFGWAA+D SG LSPF+FSRRATGE+DV FKV +CGICHSDLH IKNE Sbjct: 1 MAKSPEEEHPVKAFGWAARDHSGHLSPFNFSRRATGEEDVRFKVLYCGICHSDLHSIKNE 60 Query: 61 WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKV 120 WGN YP+VPGHEIVGVVTEVGSKV KFKVGDKVGVGC+VG+CHSC+SC+ DLENYC K+ Sbjct: 61 WGNAAYPMVPGHEIVGVVTEVGSKVEKFKVGDKVGVGCLVGACHSCESCSDDLENYCSKL 120 Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180 I+TY YHDGT TYGGYSD MVA E +VVRIP+ PL A APLLCAGITVYSPL+++G Sbjct: 121 ILTYNMPYHDGTRTYGGYSDTMVAPERYVVRIPDNMPLAAGAPLLCAGITVYSPLKYFGF 180 Query: 181 DKPGMHVGCXRLGRSRPCRPSIRKGYGGSGDCDQYPPSKKSEAIERLGAEFFLVSRDQNE 240 +PGMH+G LG K +G PSKK EAIE LGA+ FLVSRD + Sbjct: 181 TQPGMHIGIVGLGGLGHVAAKFAKAFGVKVTLISTSPSKKKEAIEHLGADSFLVSRDPEQ 240 Query: 241 MQAALGTMDGIIDT 254 MQAA+GTMDGI+DT Sbjct: 241 MQAAMGTMDGILDT 254 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs63669 (185 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs50155 (284 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs84306 (201 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv31428 136 3e-34 >Vv31428 Length = 239 Score = 136 bits (342), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 60/71 (84%), Positives = 64/71 (90%) Query: 1 MIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDT 60 MII+ GAYPSPLGYGGFPKSVCTSVNEC+CHGIPDSR L+DGD INIDVTVY NGYHGDT Sbjct: 168 MIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYFNGYHGDT 227 Query: 61 SATFFCGDVDD 71 S TF CG+V D Sbjct: 228 SKTFLCGNVTD 238 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs38831 (59 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs106138 (131 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs98185 (134 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16714 (290 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88177 (98 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42878 (231 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs35873 (112 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs103814 (211 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv52603 113 3e-27 >Vv52603 Length = 198 Score = 113 bits (282), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/141 (48%), Positives = 77/141 (54%), Gaps = 3/141 (2%) Query: 13 SFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLTECAHYQAQLQKNLMYLAAIXXXXX 72 SFPPT ITTEQIQKYLDENK+LILAIL+NQNLGKL ECA YQAQLQKNL+YLAAI Sbjct: 14 SFPPTAITTEQIQKYLDENKQLILAILENQNLGKLAECAQYQAQLQKNLIYLAAI-ADAQ 72 Query: 73 XXXXXXXXXXXXXXXXXSGYYMQHPXXXXXXXXXGIFPQKMPLQFNNXXXXXXXXXXXXX 132 G+YMQHP G+F K+P Q ++ Sbjct: 73 PPAPTVPPQMPIHHAMQQGHYMQHPQAAAAQQQPGMFGAKLPFQLSDQQQQQQHHLLHLQ 132 Query: 133 XXX-XXXXXGMRPGATNNGMH 152 GMRP NNGMH Sbjct: 133 QQQPIQGLMGMRP-IINNGMH 152 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs62191 (244 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv16766258 153 2e-39 >Vv16766258 Length = 393 Score = 153 bits (387), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 82/221 (37%), Positives = 125/221 (56%), Gaps = 2/221 (0%) Query: 23 LFIIGLSVSVFILIVVHDAAFLLFFLLPSTFVICFIAWNMLNRNHKAALSLFVRSFPDSD 82 LF++G FIL VH+ L+ ++ V WN + A++ F+ +PD++ Sbjct: 174 LFVMGFIAGGFILGAVHNPILLIVVVVLFGAVAAVFIWNTYW--GRRAITGFIARYPDAE 231 Query: 83 LRLAPHGQLVKITGLASCGSVSLESSYEKATRCIYTSTLLYEYGRLGLKPVYVNKSCCQW 142 LR A GQ VK++G+ +CG+V LESS+++ RC+YTST LYEY K W Sbjct: 232 LRTARDGQFVKVSGVVTCGNVPLESSFQRVPRCVYTSTSLYEYRGWDSKAANPTHRRFTW 291 Query: 143 SLAYCERFSTDFYITDRKSGIRVLVKAGSGCKVLPLICESNIVTTSGCSRILSTHLRKWL 202 L ER DFYI+D +SG+R LVK G G +V P + ES +V + +R +S +WL Sbjct: 292 GLRSLERHVVDFYISDFQSGLRALVKTGYGARVTPYVDESVVVDINQSNRDMSPEFIRWL 351 Query: 203 RDRNLPXXXXXXXXXXGYVQEGSSVTVVGMLCKDNDLLMIV 243 +RNL Y++EGS+V+V+G++ ++ +LMIV Sbjct: 352 GERNLSSDDRVMRLKESYIKEGSTVSVMGVVQRNEIVLMIV 392 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs50906 (60 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69360 (173 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78137 (126 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18778 (118 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs85954 (240 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs27524 (239 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs9266 (266 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs81499 (276 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100262 (115 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs83869 (132 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs12861 (334 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv50131 181 1e-47 >Vv50131 Length = 178 Score = 181 bits (459), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 90/149 (60%), Positives = 104/149 (69%) Query: 17 SNYDEVAMQQXXXXXXXXXXXXXXRTQLYSAAEYFELSYTNDDQKQIVVETLKDYAVKAL 76 SNYDE +MQQ R QLYSAAEYFE Y DDQKQIV+ETLKDYA+KAL Sbjct: 27 SNYDEYSMQQSLLFGDSLKDLKSLRKQLYSAAEYFEQCYHKDDQKQIVLETLKDYAIKAL 86 Query: 77 VNTVDHLGSVTYKVNDLLDEKVDEVSDTEHRVSCIEQRLRTCQEYIDHEGLSQQSLVINT 136 VNTVDHLGSVTYKVN LD+K+ EV TE + SCIEQR+RTC+E+I+ G QQSL++ T Sbjct: 87 VNTVDHLGSVTYKVNTFLDDKIGEVHGTELQFSCIEQRIRTCREFINRSGFCQQSLLMRT 146 Query: 137 PKYHKRYILPVGETMHGAIRTKSKYIGCS 165 PK+HKRY P GET + T Y CS Sbjct: 147 PKHHKRYTFPXGETTNTTGHTIPTYQTCS 175 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4259 (148 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78990 (74 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs57118 (242 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv47251 73 5e-15 >Vv47251 Length = 261 Score = 72.8 bits (177), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 7/218 (3%) Query: 1 MHKLKIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYRD--NI 58 M +L ++P++ T++ +L+ C+ S D E + + + + + D N+ Sbjct: 36 MLRLGLQPSLQTYTLLLSCCTEARSSFDMGFCGELMAVTGHPAHMFLLSMPAAGPDGQNV 95 Query: 59 WVQALSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSE-- 116 D + D + +A+ D L G K A V ++ V+ + E Sbjct: 96 RDHVSKFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVREKS 155 Query: 117 SC---LDLHLMSSGAARAMVHAWLLNIHSIVFEGHELPKLLSILTGWGKHSKVVGDGALR 173 SC ++LH MS G A + L H + +P + I+TGWG+ S+V G +R Sbjct: 156 SCYWLINLHFMSDGTAVTALSRTLAWFHREMLVSGTVPSRIDIVTGWGRRSRVTGASLVR 215 Query: 174 RAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRES 211 +AV+ LL PF+ N N G F+ G + WL +S Sbjct: 216 QAVQELLHIFSFPFFTENGNSGCFVGRGEPLGRWLLQS 253 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs19853 (72 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs90001 (176 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs29362 (230 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64554 (204 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59221 (152 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs3951 (185 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv14651 295 4e-82 >Vv14651 Length = 241 Score = 295 bits (755), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 142/178 (79%), Positives = 154/178 (86%) Query: 1 MLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXX 60 MLEMD EYEGNVEATGEDYSVEP D+RRPFRALLDVGL++TTTGNRVF Sbjct: 52 MLEMDGEYEGNVEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 111 Query: 61 IPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGID 120 IPHSDKRFAGFSKD KQLDAEVHRKYIYGGHV+AYM TL+EDEPEKYQSHF+EYIKKG++ Sbjct: 112 IPHSDKRFAGFSKDSKQLDAEVHRKYIYGGHVSAYMGTLIEDEPEKYQSHFSEYIKKGVE 171 Query: 121 ADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNS 178 D +E +YKKVHAAIRA+P KK EK PKEHKRYNLKKLTYEERKAKL+ERLNALNS Sbjct: 172 PDDIEEMYKKVHAAIRANPIQKKVEKQPPKEHKRYNLKKLTYEERKAKLIERLNALNS 229 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs73473 (250 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs24051 (316 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78782 (62 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7027 (345 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs36197 (277 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6923 (155 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78980 (276 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv32064 353 1e-99 >Vv32064 Length = 270 Score = 353 bits (907), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 170/252 (67%), Positives = 201/252 (79%), Gaps = 3/252 (1%) Query: 8 SRNKRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFK 67 S + RWSL GMTALVTGGT+GIGHA VEELA GA +HTCSR + EL+ L +WK KGF Sbjct: 9 SGDSRWSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFG 68 Query: 68 VTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNF 127 V+GSVCD+SSR QREKL+ETV+S+F GKLNIL+NNAAI KPTV++TAE+ ST+ + NF Sbjct: 69 VSGSVCDVSSRAQREKLMETVSSVFNGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINF 128 Query: 128 ESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 187 ESV+HLSQLAHPL KASG GSIVFISSV GV + +S Y A KGAMNQLTKNLACEWA+ Sbjct: 129 ESVYHLSQLAHPLLKASGAGSIVFISSVAGVVSLKYLSAYSATKGAMNQLTKNLACEWAE 188 Query: 188 DNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPA 247 DNIR+N VAPW IKT M+ ++ FL+G+ + P+ R G+P EVSSLVAFLCLPA Sbjct: 189 DNIRSNAVAPWYIKTPMV---DQMLSNKTFLEGVINRAPLRRVGDPKEVSSLVAFLCLPA 245 Query: 248 ASYITGQIICVD 259 +SYITGQ ICVD Sbjct: 246 SSYITGQTICVD 257 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs15336 (263 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv32064 359 e-101 >Vv32064 Length = 270 Score = 359 bits (921), Expect = e-101, Method: Compositional matrix adjust. Identities = 170/260 (65%), Positives = 205/260 (78%), Gaps = 3/260 (1%) Query: 4 SREQRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLK 63 S + RWSLKGMTALVTGGT+GIGHAIVEEL GA +HTCSR ETELNE +++WK+KG Sbjct: 9 SGDSRWSLKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFG 68 Query: 64 VSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNF 123 VSGS CD+ RA+R+KLMETV S F+GKLNILVNNA I K E T E+FSTIM NF Sbjct: 69 VSGSVCDVSSRAQREKLMETVSSVFNGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINF 128 Query: 124 ESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLSSIYASTKGAMNQLTKNLACEWGK 183 ES YHLSQLA+PLLKASG G+I+FISSV GV+++ S Y++TKGAMNQLTKNLACEW + Sbjct: 129 ESVYHLSQLAHPLLKASGAGSIVFISSVAGVVSLKYLSAYSATKGAMNQLTKNLACEWAE 188 Query: 184 DNIRVNAVAPWIIRTSLIDSIEKDPRVMEHASRLIPRTPIPRPGEPNEVSSVVAFLCLPA 243 DNIR NAVAPW I+T ++D + + +E +I R P+ R G+P EVSS+VAFLCLPA Sbjct: 189 DNIRSNAVAPWYIKTPMVDQMLSNKTFLEG---VINRAPLRRVGDPKEVSSLVAFLCLPA 245 Query: 244 ASYVTGQVFCIDGGYSVNGF 263 +SY+TGQ C+DGG +VNGF Sbjct: 246 SSYITGQTICVDGGVTVNGF 265 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs43015 (215 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs3057 (156 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs66689 (145 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv47659 138 4e-35 >Vv47659 Length = 393 Score = 138 bits (348), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 70/153 (45%), Positives = 89/153 (58%), Gaps = 8/153 (5%) Query: 1 MQKFDDKIPAREFDNFQFVNFTAIMSKNATPSEKETAFALAALMEIPIQYKAAVELGIMG 60 M+ FDD IP R FDNFQFVNF+ IMS+N S+KETAFAL+ALMEIP QY+A + L + Sbjct: 241 MKLFDDNIPQRSFDNFQFVNFSKIMSENMEASKKETAFALSALMEIPFQYRATLRLQSID 300 Query: 61 RTTGXXXXXXXXXXXXXXXXXXXXERQPSRGSTPVAET--------QACPICLTNAKDLA 112 Q +T E Q CPICLTN K++A Sbjct: 301 NNLVGGPRTRPLPPPKEVLDHDREALQHMMATTLSVEAVEQTAPVDQVCPICLTNPKNMA 360 Query: 113 FGCGHMTCRECGSRVSNCPICRQRITNRLRLFA 145 FGCGH+TC+ECG +S CP+CR+ I RL+L++ Sbjct: 361 FGCGHLTCKECGESISLCPLCREPINTRLKLYS 393 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs15036 (36 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104777 (114 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs5547 (202 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs63670 (212 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96669 (90 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv57770 161 2e-42 >Vv57770 Length = 149 Score = 161 bits (408), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 80/90 (88%), Positives = 86/90 (95%) Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60 M++VL+ EQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMI EVD+D Sbjct: 1 MADVLSEEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMIREVDADG 60 Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAF 90 NG+IEF EFLNLMAKK+KETDAEEELKEAF Sbjct: 61 NGSIEFAEFLNLMAKKVKETDAEEELKEAF 90 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs63097 (103 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64004 (186 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100216 (195 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs47196 (211 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs45790 (138 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs40026 (253 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100314 (451 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs68006 (221 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs62122 (52 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs39937 (110 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs20899 (246 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv1285 64 3e-12 >Vv1285 Length = 149 Score = 63.9 bits (154), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 46/67 (68%) Query: 11 KIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVNIDAEQQKVTVSGSVDSATLIKKLVRA 70 ++QT LKV + C+GC+ KVKK L ++GV V+++ +QQK +V+G D+ ++KK Sbjct: 24 QLQTVDLKVRMDCEGCQLKVKKALSSLKGVKSVDVNLKQQKASVTGYADAKKVLKKAQST 83 Query: 71 GKHAELW 77 GK AELW Sbjct: 84 GKKAELW 90 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs32833 (82 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs70351 (142 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs86885 (249 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs10247 (259 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33374 (291 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv15500 69 1e-13 >Vv15500 Length = 509 Score = 68.9 bits (167), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 37/243 (15%) Query: 27 GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQC 86 G+ +L+ DW+ ++ H + R + + P +LINGRG S Sbjct: 126 GDITVLIGDWY-KANHTTLKAILDRGKK-LHFPDGILINGRGPNGVSFT----------- 172 Query: 87 KLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDD 146 V+ KTYR RI +++HKMV+VE +G + Sbjct: 173 --------------VEQGKTYRFRISNVGLQNSLNFRIQDHKMVLVEVEGTHTLQTTYSS 218 Query: 147 MDIYSGESYSVLLTTNQDPSHNYWISAGVRGRKPETPPALTLLNYHPTSASKIPLSPPPI 206 +D++ G+SYSVL+T +Q P+ +++I R + +L Y ++ P Sbjct: 219 LDVHVGQSYSVLVTADQ-PAQDFYIVVSTR-FTSQVLTTTGILRYSNSAGPVSGPPPGGP 276 Query: 207 TPRWD-DYDHSKSFSNKIFALMGSPKPPTNFH-------RRLTLLNTQNNINGFTKWAIN 258 T + D + ++S + A P P ++H R + L ++ +NG ++A+N Sbjct: 277 TIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGMINTSRTIRLASSAGQVNGKQRYAVN 336 Query: 259 NVS 261 +VS Sbjct: 337 SVS 339 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs72575 (119 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64538 (242 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs70098 (87 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs162106182 (107 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96823 (204 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs94206 (137 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs55503 (242 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs48074 (257 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv43587 370 e-104 >Vv43587 Length = 324 Score = 370 bits (950), Expect = e-104, Method: Compositional matrix adjust. Identities = 179/258 (69%), Positives = 204/258 (79%), Gaps = 1/258 (0%) Query: 1 MANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKA-FDSVERIKDGFIH 59 M N SY PVAAAK++QITAQL++ + + FD VER+K GFI+ Sbjct: 67 MGNGSYDEAVEGLRKLLREKANLEPVAAAKIDQITAQLKSSDGSSSPFDPVERMKTGFIY 126 Query: 60 FKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPY 119 FK+EKY+KNPAL++ELAKGQSPK+MVFACSDSRVCPSHVLDFQPG+AFVVRNVAN+VP Y Sbjct: 127 FKKEKYDKNPALHAELAKGQSPKFMVFACSDSRVCPSHVLDFQPGDAFVVRNVANMVPAY 186 Query: 120 DQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGI 179 D+ + LHLKV +IVVIGHS+CGGIKGLMSFPFDG +STDFIEDWVKIG+ Sbjct: 187 DKIRYSGVGSAVEYAVLHLKVEHIVVIGHSSCGGIKGLMSFPFDGTSSTDFIEDWVKIGL 246 Query: 180 PAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVN 239 PAKSKV+ E GD PF +QC YCEKEAVNVSL NLL+YPFVREGLV KTL LKGGYYDFV Sbjct: 247 PAKSKVVAECGDLPFPEQCAYCEKEAVNVSLGNLLSYPFVREGLVKKTLTLKGGYYDFVK 306 Query: 240 GSFELWGLDFGLSPPLSV 257 G+FELWGLDFGLSP SV Sbjct: 307 GTFELWGLDFGLSPSFSV 324 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs87925 (197 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv17321 281 6e-78 >Vv17321 Length = 233 Score = 281 bits (719), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 133/154 (86%), Positives = 144/154 (93%) Query: 42 EGRAFTEEQEALVVKSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQ 101 E RAFTEEQEALVVKSW+ MKKNAGEL LKFFLRIFEIAPSA+KLFSFLRDS+VP EQN Sbjct: 76 EVRAFTEEQEALVVKSWSSMKKNAGELSLKFFLRIFEIAPSAKKLFSFLRDSDVPPEQNP 135 Query: 102 KLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLET 161 KLKPHA+SVFVMTCESA+QLRKAG+VTVRES L LGA HFKYGVV+EHFEVTK++LLET Sbjct: 136 KLKPHALSVFVMTCESAIQLRKAGRVTVRESNLIDLGATHFKYGVVDEHFEVTKYALLET 195 Query: 162 IKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMKP 195 IKEAVP+MWSPEMKSAW+EAYDQLVAAIK EMKP Sbjct: 196 IKEAVPDMWSPEMKSAWAEAYDQLVAAIKKEMKP 229 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs31373 (293 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4026 68 2e-13 >Vv4026 Length = 401 Score = 68.2 bits (165), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 81 QGKRKMKVDWTPELHRRFVQAVEQLGVDKA-VPSRILELMGIDCLTRHNIASHLQKYRSH 139 Q RK + W+PELHRRFV A++QLG +A P +I ELM +D LT + SHLQKYR H Sbjct: 252 QTARKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 311 Query: 140 RKHL 143 + + Sbjct: 312 TRRM 315 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs86931 (92 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs92287 (95 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs89042 (115 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs29916 (274 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs87522 (87 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs46499 (95 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv31627 72 1e-15 >Vv31627 Length = 419 Score = 72.4 bits (176), Expect = 1e-15, Method: Composition-based stats. Identities = 30/45 (66%), Positives = 40/45 (88%) Query: 51 TMINFAGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 95 ++I G++VGMKNWLR+TFAI+P +LE+GLGRIKAF QRHAK++ Sbjct: 375 SVIVLPGVSVGMKNWLRVTFAIDPPSLEDGLGRIKAFYQRHAKKE 419 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs17185 (234 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv34770 70 4e-14 >Vv34770 Length = 201 Score = 69.7 bits (169), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 76/138 (55%), Gaps = 24/138 (17%) Query: 72 IWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYK 131 ++D F R++ Q++ M++ ME+P + + + RRG W ++E ++ Sbjct: 64 VFDPFSRTRSLSQVLNLMDQFMENPLV------AASRGMGAVSRRG---WDVKEEKDALF 114 Query: 132 IRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIA 191 +R+D+PG+ + DVKV VE++ L+IK E + E + G Y++RI Sbjct: 115 VRMDMPGLGKEDVKVSVEQNTLIIKGEGGKELENDETGR--------------KYTSRID 160 Query: 192 LPDNV-EFEKIQAEVKDG 208 LP N+ +F++I+AE+K+G Sbjct: 161 LPANLYKFDEIKAEMKNG 178 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4145 (74 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs26447 (102 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104090 (227 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv17966265 273 3e-75 >Vv17966265 Length = 389 Score = 273 bits (697), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 119/144 (82%), Positives = 134/144 (93%) Query: 76 RFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLY 135 RFKTLP +E+LPRNE +GGYIFVCNNDTMQE+LKRQLFGLPPRYRDSVRAITPGLPLFLY Sbjct: 240 RFKTLPPSESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLFLY 299 Query: 136 NYTTHQLHGIFEATGFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDAFRPV 195 NY+THQLHG+FEA FGG+NIDPTAWEDKKC GESRFPAQVR+ RK+C+ +EED+FRPV Sbjct: 300 NYSTHQLHGVFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPMEEDSFRPV 359 Query: 196 LHHYDGPKFRLELSVPETLDLMDL 219 LHHYDGPKFRLEL+VPE L L+D+ Sbjct: 360 LHHYDGPKFRLELNVPEALSLLDI 383 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs22681 (148 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2866265 69 5e-14 >Vv2866265 Length = 276 Score = 68.6 bits (166), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 65/102 (63%), Gaps = 5/102 (4%) Query: 21 EYAYTLRVNEKSDIYSFGVVLLELITGRPPID-PEFGEKD---LVKWVCTTLDQKGLDNI 76 EY T + +EK+D++ +G++LLELITG+ D D L+ WV L +K L+ + Sbjct: 126 EYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEML 185 Query: 77 IDSNLDSSY-KDQICRVLEISLLCTNALPLNRPSMRKVGKLL 117 +D +L ++Y + ++ ++++++LLCT P+ RP M +V ++L Sbjct: 186 VDPDLQTNYVEAEVEQLIQVALLCTQGSPMERPKMSEVVRML 227 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs72977 (297 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs55088 (244 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25814 (208 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2632 71 2e-14 >Vv2632 Length = 397 Score = 70.9 bits (172), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 15/201 (7%) Query: 8 QPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDV 67 QP P+ + ++ GA AGV+ + + P EL+K RL Q G V Y G D Sbjct: 204 QPKIPIPAS--LVAGACAGVSSTLVTYPLELLKTRLTIQ------GDV-----YNGLFDA 250 Query: 68 AKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYEFVKQYMAGGQDTSQXXXXXXXXX 127 ++L+ EGG L++GL P++ VP A + Y+ +++ + Sbjct: 251 FVKILQ-EGGPAELYRGLTPSLIGVVPYAATNYFAYDTLRKTYRKILKQEKIGNIETLLI 309 Query: 128 XXXXXXCFWFSVYPTDVVKSVIQVDDYKNPK-FSGSIDAFKKILKSEGVKGLYKGFGPAM 186 + +P +V + +QV + + + A IL+ EG+ GLYKG GP+ Sbjct: 310 GSLAGAISSSATFPLEVARKHMQVGALSGRQVYKNVLHALSSILEQEGIPGLYKGLGPSC 369 Query: 187 ARSVPANAACFLAYEVTRSSL 207 + VPA F+ YE + L Sbjct: 370 LKLVPAAGISFMCYEACKRIL 390 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs12246 (153 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv35865 252 2e-69 >Vv35865 Length = 229 Score = 252 bits (643), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 113/137 (82%), Positives = 128/137 (93%) Query: 8 NRWPPWLKPLLRESFFVQCKLHPDSHKSECNMYCLDCMNGAFCSLCLDYHKDHRAIQIRR 67 ++WPPWL+PLL+ SFFVQCKLH DSH+SECNMYCLDCMNGA CSLCL++HKDHRAIQIRR Sbjct: 25 SKWPPWLRPLLQTSFFVQCKLHADSHRSECNMYCLDCMNGALCSLCLNFHKDHRAIQIRR 84 Query: 68 SSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRSLLDS 127 SSYHDVIRVSEIQK LDI+GVQTY+INSAR+VFLNERPQPRPGKGVTNTC+VC+RSLLDS Sbjct: 85 SSYHDVIRVSEIQKFLDITGVQTYIINSARIVFLNERPQPRPGKGVTNTCQVCERSLLDS 144 Query: 128 FRFCSLGCKVTLITTNF 144 F FCSLGCK+ + +F Sbjct: 145 FTFCSLGCKIVGTSKSF 161 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs50257 (98 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100144 (274 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs49496 (230 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs58194 (167 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv53234 207 6e-56 >Vv53234 Length = 261 Score = 207 bits (528), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 110/178 (61%), Positives = 122/178 (68%), Gaps = 14/178 (7%) Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAK-Q 59 MQEKDWLSLVAVHSD+WLLAVAFYFGARFGF K +RK+LF MINDLPTIFEVVTG AK Q Sbjct: 85 MQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVTGTAKKQ 144 Query: 60 PKDQSA-----------NHNXXXXXXXXXXRPAESQTKAVKMSPPPKXXXXXXXXXXXXX 108 K++S+ N R +ESQ K K P K Sbjct: 145 VKEKSSVSNHSSNKSKSNSKVVPQQQQPQQRGSESQGKYSKT--PQKDEDEGLEEEEEDE 202 Query: 109 XQGATCGACGDNYGTDEFWICCDICEKWFHGKCVKITPAKAEHIKQYKCPSCSSKRAR 166 CGACG+NY +DEFWICCDICEKWFHGKCVKITPA+AEHIKQYKCPSCS+KR+R Sbjct: 203 HGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRSR 260 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs97309 (65 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs12954 (136 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs15351 (252 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs68189 (162 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93486 (231 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs29412 (180 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv52403 143 2e-36 >Vv52403 Length = 221 Score = 143 bits (360), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 71/122 (58%), Positives = 87/122 (71%) Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74 ++ G +SV+G + Q +G T V +ITGL PG HGFH+H GDTTNGC STG HFNP Sbjct: 75 VLKGTSSVEGVVTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCMSTGAHFNPN 134 Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134 HGAP D+ RH GDLGNIVA +GVAE +I D IPLSG ++++GRA+VVH DDLG Sbjct: 135 GMTHGAPEDDVRHAGDLGNIVANAEGVAEATIVDTQIPLSGPNAVIGRALVVHELEDDLG 194 Query: 135 KG 136 KG Sbjct: 195 KG 196 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs34148 (97 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv59577 119 1e-29 >Vv59577 Length = 186 Score = 119 bits (297), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 55/61 (90%), Positives = 58/61 (95%) Query: 1 MLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAIRLGISRALQNWEPDLRPALRS 60 MLDHRAALLRPFSETKTLGLWDV+CTVKGGG+SGQVGAIRLGISRALQNWEP LRP LR Sbjct: 97 MLDHRAALLRPFSETKTLGLWDVNCTVKGGGLSGQVGAIRLGISRALQNWEPGLRPQLRE 156 Query: 61 S 61 + Sbjct: 157 A 157 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs47788 (104 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv25326 85 3e-19 >Vv25326 Length = 101 Score = 85.1 bits (209), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 44/76 (57%), Positives = 52/76 (68%), Gaps = 2/76 (2%) Query: 21 ESSRALSLCKMSDAGLEACKPYVTQDAPNTAAPSAQCCKALAGADLQCLCGYKGSPMLKA 80 E S SLC MS+ L CKP V++ P+ PS +CCKAL+GADL CLC YK S L Sbjct: 21 EGSEGFSLCNMSEDDLMTCKPAVSK--PSPVDPSPECCKALSGADLTCLCSYKNSETLPF 78 Query: 81 FGIDPDLALALPAKCN 96 GIDPDLA+ALP+KCN Sbjct: 79 LGIDPDLAMALPSKCN 94 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41406 (265 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs95655 (129 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs55317 (269 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6926 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs21597 (231 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs80110 (255 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs57993 (125 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs72948 (143 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs66175 (260 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv16336 94 3e-21 >Vv16336 Length = 400 Score = 93.6 bits (231), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 76/241 (31%), Positives = 113/241 (46%), Gaps = 61/241 (25%) Query: 20 ENVRYGLSSMQGWRATMEDAHAAYP-----DLDSSTS--FFGVYDGHGGKAVAKFCAKYL 72 E ++G++S++G R MEDA + +P D + T ++GVYDGHG VA C + Sbjct: 102 ECPKFGMTSVRGRRRDMEDAVSIHPSFWGQDAQNCTGLHYYGVYDGHGCSHVAMKCKDRM 161 Query: 73 HQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDK-FSGMIEGFIWS 131 H+ + +E+ R + W ++ M++ FS M + + Sbjct: 162 HE---------------------IAKEEIERCGQSWEQV------MERSFSRMDKEVV-- 192 Query: 132 PKGGEANDHFDDWTSEEYKQHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIRDKQLVV 191 +W + ++ + L P D GSTA VAI+ +++VV Sbjct: 193 -----------EWCNGQWSSNCRCE------LRTPQCD----AVGSTAVVAIVTPEKVVV 231 Query: 192 ANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIG 248 +N GDSR VL R G A+ LS DHKPD E RI AGG + V RV G L ++RAIG Sbjct: 232 SNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRIQAAGGRVIYWDVPRVLGVLAMSRAIG 291 Query: 249 D 249 D Sbjct: 292 D 292 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs99788 (347 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs10194 (251 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv22966256 353 2e-99 >Vv22966256 Length = 306 Score = 353 bits (905), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 175/251 (69%), Positives = 199/251 (79%) Query: 1 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXX 60 MP IA+G P++ HPDAL+ ALAEF TLIFVFAGEGSGMAF+KLT +G+ TP+ Sbjct: 56 MPFLRIAIGQPQDTYHPDALKKALAEFFGTLIFVFAGEGSGMAFSKLTDDGSTTPAGLIA 115 Query: 61 XXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLL 120 NISGGH+NPAVTFGAFVGGNI+LLRGILYWIAQLLGS VACLL Sbjct: 116 EALGHGLGLFVAVSGAWNISGGHINPAVTFGAFVGGNITLLRGILYWIAQLLGSAVACLL 175 Query: 121 LKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIG 180 LKF T+G TTSAFA+SSG WNA V EIVMTFGLVYTVYATA+DP+ G++G IAP+AIG Sbjct: 176 LKFCTHGMTTSAFAISSGETVWNAFVLEIVMTFGLVYTVYATAIDPRNGNVGIIAPLAIG 235 Query: 181 FIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIN 240 IV ANILAGGAFDGASMNPA+SFGPALVSW W NHWVYW GPLIGGG+AG VYE FI+ Sbjct: 236 LIVAANILAGGAFDGASMNPAMSFGPALVSWDWTNHWVYWAGPLIGGGIAGFVYETIFID 295 Query: 241 QSHEQLPTTEY 251 ++HE LP +E+ Sbjct: 296 RTHEPLPGSEF 306 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs29551 (50 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs84643 (93 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv44727 90 7e-21 >Vv44727 Length = 719 Score = 90.1 bits (222), Expect = 7e-21, Method: Composition-based stats. Identities = 40/58 (68%), Positives = 45/58 (77%) Query: 22 GVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGRHVEDTIL 79 GV L+GGPRAS LL +PE FHHEYNSM CTVEIVDDV +AIDHIH+HG D I+ Sbjct: 574 GVTLYGGPRASALLNLPEAHSFHHEYNSMACTVEIVDDVHSAIDHIHRHGSAHTDCII 631 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs8874 (386 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16666 (253 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv12866259 80 4e-17 >Vv12866259 Length = 264 Score = 80.1 bits (196), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 86/207 (41%), Gaps = 50/207 (24%) Query: 65 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQTW 117 P +L G PGDYG+D GL DP RE E+IH RWAM +G G + Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 124 Query: 118 SGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ 165 WF+AGA +P I S ++ Q++LMG VE R Sbjct: 125 GEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIA-------- 176 Query: 166 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIK 225 P + YPGG F DPL LA D E LKV EIK Sbjct: 177 ----GGPLGEVTDPL--------YPGGSF-DPLGLAD---------DPEAFAELKVKEIK 214 Query: 226 HARLAMVAMLIFYFEA-GQGKTPLGAL 251 + RLAM +M F+ +A GK PL L Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENL 241 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104321 (70 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs9846 (120 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs74106183 (155 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93799 (160 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv15466256 115 5e-28 >Vv15466256 Length = 322 Score = 115 bits (287), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 59/154 (38%), Positives = 97/154 (62%), Gaps = 1/154 (0%) Query: 1 MSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYW 60 +SKTLAE AAW+FA++ G D+V I+PA +GP QP +N S A + L+ G + T + Sbjct: 163 VSKTLAEDAAWKFAKEKGIDMVTINPAMVIGPLLQPTLNTSAAAILNLINGGQ-TFPNAS 221 Query: 61 LGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPIHRFKGETQP 120 G V+VKDVA+A + FE +ASGRY + ++E + + +LFP++ + + +P Sbjct: 222 FGWVNVKDVAEAHIQAFEVPSASGRYCLVERVVHYSELVKILKELFPDFQLPEKCADDKP 281 Query: 121 GLVACENAAKRLISLGLDFTPVEETIREAVESLK 154 + + + ++ SLG++F P+E +++E VESLK Sbjct: 282 FVPTFQVSKEKAKSLGIEFIPLEVSLKETVESLK 315 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96440 (212 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv7372 207 1e-55 >Vv7372 Length = 153 Score = 207 bits (526), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 98/141 (69%), Positives = 123/141 (87%) Query: 68 AILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDI 127 ++++YLE+KYPQ PLLP DLK++AINYQAA+ VSSSIQPLQNL KYI E+ G+DE+ Sbjct: 9 SLVLYLEDKYPQHPLLPPDLKKRAINYQAASFVSSSIQPLQNLVEQKYIAEEVGSDEKLS 68 Query: 128 WAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLK 187 W K H+ KGFAALEKLLKD+A KYA+GDEVFLADL+LAPQ++ A+ RFN+DMTQF LLL+ Sbjct: 69 WVKHHMEKGFAALEKLLKDHAAKYASGDEVFLADLFLAPQIHDALTRFNVDMTQFSLLLR 128 Query: 188 LHEAYSKLPAFQNAAPEKQPD 208 L++AY++LPAFQ+A PEKQPD Sbjct: 129 LNDAYNELPAFQDAMPEKQPD 149 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs91836 (168 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs23442 (162 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs53955 (290 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs83716 (249 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs12428 (128 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs71303 (145 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs58152 (157 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82150 (214 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv47574 131 1e-32 >Vv47574 Length = 207 Score = 131 bits (329), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 61/114 (53%), Positives = 78/114 (68%) Query: 93 LYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYENLKPDPVXXXXXXXXXXXKIIFTNA 152 L+KNYG+T+AGLRA+GY+ D DDYHSFVHGRLPYE +KPD KII TN+ Sbjct: 4 LFKNYGSTLAGLRALGYNIDADDYHSFVHGRLPYELIKPDSQLRSLLRSIALRKIILTNS 63 Query: 153 DKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNNVSDDEDDIAFVESAASTQLA 206 D+ HA+KVL RLGL+DCF+ IICFET+NP + DE + S + ++A Sbjct: 64 DRNHAIKVLDRLGLQDCFDQIICFETMNPNLPKSTRLDEFPVILNPSLDAMKIA 117 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs48463 (84 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv17253 94 5e-22 >Vv17253 Length = 205 Score = 94.0 bits (232), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 57/84 (67%), Positives = 66/84 (78%) Query: 1 MHVLVTVEPEGVVAMPNVEEREFIIFNIACDELLLGIPYKAWWVVVFVLLCLGLALITPY 60 M+VLVTVEP GVVA+P+ ERE +IFNI CDELLLGIPYKAWWV +LLCLGLALI P+ Sbjct: 122 MYVLVTVEPAGVVAIPHTRERELVIFNIVCDELLLGIPYKAWWVGFLILLCLGLALIIPH 181 Query: 61 FLPSYLLPKNGGLPSDLRNVSKES 84 FLP YLL KN G S + + K+S Sbjct: 182 FLPPYLLQKNHGPQSANQVLLKDS 205 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs91467 (63 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs49404 (261 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69188 (430 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs51345 (145 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs49303 (116 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs32065 (274 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs61082 (89 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs99047 (192 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv55845 82 9e-18 >Vv55845 Length = 484 Score = 81.6 bits (200), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 33/40 (82%), Positives = 38/40 (95%) Query: 148 RYPYPVRPDAQDCTFYMKTGTCKFGSNCKFNHPVRRKNQV 187 R+ YPVRPDA DC+FY++TGTCKFGSNCKFNHP+RRKNQV Sbjct: 123 RFQYPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQV 162 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs37079 (176 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv55845 213 2e-57 >Vv55845 Length = 484 Score = 213 bits (541), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 108/167 (64%), Positives = 126/167 (75%), Gaps = 10/167 (5%) Query: 1 MMYSPTPGVPSQNSEWNGYQSPLYPQ---ERSVQSAPTYVINNNPLVDNVQIIHQPQM-- 55 +M+SPT GVP N EWNGYQ+PLYP ERS+ P +VINN NV HQ Q Sbjct: 298 IMFSPTQGVPPPNPEWNGYQAPLYPPPPPERSMHPPPAFVINNTATDANVYGHHQQQQQS 357 Query: 56 LVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVC 115 L+ +FPERPGQPECSYFL+TGDCK+++ CKYHHPKNRIPKSPPCTLSDKGLPLRP QN+C Sbjct: 358 LIEDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNIC 417 Query: 116 SYYSRYGICKFGPACKYDHPIH-----PDASAEYGLDPPPSFGDSTT 157 ++Y+RYGICKFGPACK+DHP++ SAE G D PP FG S T Sbjct: 418 THYNRYGICKFGPACKFDHPVNYGNSASAPSAESGQDQPPPFGGSVT 464 Score = 93.6 bits (231), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 3/98 (3%) Query: 60 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYS 119 FPERPGQ EC Y+LRTG CK+ C+Y+H K + P L+ GLP+R G+ C YY Sbjct: 175 FPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYM 234 Query: 120 RYGICKFGPACKYDHPIHPDASAEYGLDPPPSFGDSTT 157 R G CK+G C+++ HPD +A G +PP +G+ + Sbjct: 235 RTGSCKYGANCRFN---HPDPTAAGGYEPPSGYGNGGS 269 Score = 80.5 bits (197), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%) Query: 59 EFPERPGQPECSYFLRTGDCKYKSNCKYHHP---KNRIPKSPPCTLSDKGLPLRPGQNVC 115 ++P RP +CS++LRTG CK+ SNCK++HP KN++ K + P RPGQ C Sbjct: 125 QYPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTEC 184 Query: 116 SYYSRYGICKFGPACKYDH 134 YY R G CKFG AC+Y+H Sbjct: 185 KYYLRTGGCKFGKACRYNH 203 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59665 (426 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33406 (221 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25963 (248 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4384 331 7e-93 >Vv4384 Length = 204 Score = 331 bits (849), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 164/195 (84%), Positives = 169/195 (86%) Query: 1 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXX 60 MGAY +VSELWRKKQSDVMRFLQRVRCWEYRQHPSIVR TRPTRPDKARRLGYKAKQ Sbjct: 1 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRATRPTRPDKARRLGYKAKQGYV 60 Query: 61 XXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120 IVYGKPTNQGVTQLKFQRSKRS+AEERAGRKLGGL+VLNSYW Sbjct: 61 IYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSIAEERAGRKLGGLKVLNSYW 120 Query: 121 INEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHL 180 INEDSTYKY+EVILVD AHNAIRNDPRINW+C PVHKHRELRGLTSAGKKYRGLRGKGHL Sbjct: 121 INEDSTYKYYEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHL 180 Query: 181 HHKARPSRRATXKRN 195 HHKARPSRRAT KRN Sbjct: 181 HHKARPSRRATWKRN 195 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs21624 (187 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78727 (236 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4299 (133 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv10885 198 4e-53 >Vv10885 Length = 306 Score = 198 bits (503), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 93/123 (75%), Positives = 105/123 (85%) Query: 1 MLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFL 60 ML++D+GDF+GTA REVEEETGI L L+DM+DLTAFL PSTGC+ FPS GGCDEEISLFL Sbjct: 181 MLENDRGDFIGTAAREVEEETGIHLNLQDMVDLTAFLDPSTGCRLFPSPGGCDEEISLFL 240 Query: 61 YRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKVLTAIALYEMASKEE 120 Y+G V KE I QLQGK+TGLR+ GELIKV VVPY +LWR T DAK L+AIALYEMA KE Sbjct: 241 YKGSVSKETITQLQGKKTGLRERGELIKVHVVPYEKLWRVTADAKTLSAIALYEMAKKEG 300 Query: 121 LLP 123 LLP Sbjct: 301 LLP 303 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs50930 (101 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv20866257 207 3e-56 >Vv20866257 Length = 101 Score = 207 bits (527), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 99/101 (98%), Positives = 100/101 (99%) Query: 1 MDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTFRVLYLAISPDG 60 MDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHT+RVLYLAISPDG Sbjct: 1 MDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDG 60 Query: 61 QTIVTGAGDETLRFWNVFPSPKSQNTDSEIGASSLGRTTIR 101 QTIVTGAGDETLRFWNVFPSPKSQNTDSEIGASSLGRT IR Sbjct: 61 QTIVTGAGDETLRFWNVFPSPKSQNTDSEIGASSLGRTQIR 101 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11667 (250 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3309 125 9e-31 >Vv3309 Length = 273 Score = 125 bits (313), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 107/202 (52%), Gaps = 24/202 (11%) Query: 61 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIIN 120 P YL G +PGD G+DP GL++ PE+ Y EL+++RWAMLG G ++PE F K G Sbjct: 75 PAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANC 134 Query: 121 VPQ--WY-------DAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK 171 P+ W+ D YF + + +I ++ V + G I Sbjct: 135 GPEAVWFKTGALLLDGNTLNYFGKNIPINLIFAVVAEVVLV---------GGAEYYRIIN 185 Query: 172 QYSLPPNEVGYPGGIFNPLNFA-PTDEA---KEKELANGRLAMLAFLGFIVQHNVTGKGP 227 L + +PGG F+PL A D+A K KE+ NGRLAM A LGF +Q VTG+GP Sbjct: 186 GLDL--EDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGP 243 Query: 228 FENLLQHISDPWHNTIVQTLSG 249 ENL H+SDP+ N ++ ++G Sbjct: 244 VENLAAHLSDPFGNNLLTVIAG 265 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41729 (181 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4708 96 3e-22 >Vv4708 Length = 471 Score = 96.3 bits (238), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 1/85 (1%) Query: 21 WCVCKDGVGDPVLQKALDYACGAG-ADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQ 79 WCV G LQ ALDYACG G ADC+PI CY+PNT++AH S+A NSY+Q+KG+ Sbjct: 383 WCVANGETGKEKLQAALDYACGEGQADCHPIQPGATCYDPNTLEAHASFAFNSYYQKKGR 442 Query: 80 AQGSCDFSGSATVATTDPSTAGCSY 104 G+CDF G+A V T P C + Sbjct: 443 VIGTCDFQGAAYVVTQAPRFGKCEF 467 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs1 (309 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59106187 (303 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv12964 92 2e-20 >Vv12964 Length = 258 Score = 91.7 bits (226), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/174 (35%), Positives = 91/174 (52%), Gaps = 12/174 (6%) Query: 74 TYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIK 133 Y+YL+ D K A ++DPV+ + L E G+ L + TH H DH G IK Sbjct: 12 NYSYLIID--ESSKEAAVVDPVEP--QKVLQAAYEYGVHLKLVLTTHHHWDHAGGNEKIK 67 Query: 134 SKVPGVXXXXXXXXXXXXDLH-VEHGDKVSFG-DLFLEVRATPGHTLGCVT-YVSGEGPD 190 VPG+ H +++GDK+S G DL + TP HT G ++ YV+G+ D Sbjct: 68 QLVPGIEVYGGSVDNVKGCTHPLQNGDKLSLGSDLAVLALHTPCHTRGHISYYVTGKEED 127 Query: 191 QPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 244 P FTGD L + GCG+ F G++ Q+Y+S+ + +LPK T +Y H+Y Sbjct: 128 VP---AVFTGDTLFVAGCGK--FFEGTAEQMYQSLCVTLASLPKPTRVYCGHEY 176 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16126 (137 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs87691 (293 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3309 463 e-132 >Vv3309 Length = 273 Score = 463 bits (1191), Expect = e-132, Method: Compositional matrix adjust. Identities = 233/275 (84%), Positives = 243/275 (88%), Gaps = 2/275 (0%) Query: 19 MLGNPLNVSSAVRTSAPGASNPSTFKPVALFXXXXXXXXXXXXXXXXXXXNEELAKWYGP 78 MLGNPLN S A RT AP AS+P+TFK VALF +EELAKWYGP Sbjct: 1 MLGNPLNFSGASRT-APSASSPATFKTVALFSKKKAAPAKAKPAAVSPA-DEELAKWYGP 58 Query: 79 DRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGA 138 DRRIFLPEGLLDRSEIP YLTGEVPGDYGYDPFGLSKKP+DF+KYQAYELIHARWAMLGA Sbjct: 59 DRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGA 118 Query: 139 AGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGA 198 AGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL+FAV+AE+VLVGGA Sbjct: 119 AGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIFAVVAEVVLVGGA 178 Query: 199 EYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYV 258 EYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ ALLKVKEIKNGRLAMFAMLGFF+QAYV Sbjct: 179 EYYRIINGLDLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYV 238 Query: 259 TGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 293 TGEGPVENLA HLSDPF NNLLTVI+G AERAPTL Sbjct: 239 TGEGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL 273 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88578 (108 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3309 94 4e-22 >Vv3309 Length = 273 Score = 94.4 bits (233), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 53/82 (64%), Positives = 56/82 (68%), Gaps = 2/82 (2%) Query: 19 MLGNPLNVSSAVRTSAPGASNPSTFKPVALFXXXXXXXXXXXXXXXXXXXNEELAKWYGP 78 MLGNPLN S A RT AP AS+P+TFK VALF +EELAKWYGP Sbjct: 1 MLGNPLNFSGASRT-APSASSPATFKTVALFSKKKAAPAKAKPAAVSPA-DEELAKWYGP 58 Query: 79 DRRIFLPEGLLDRSEIPEYLTG 100 DRRIFLPEGLLDRSEIP YLTG Sbjct: 59 DRRIFLPEGLLDRSEIPAYLTG 80 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs98572 (179 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs106118 (148 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs54569 (266 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs13761 (473 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv35733 134 5e-33 >Vv35733 Length = 262 Score = 134 bits (336), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 138/262 (52%), Gaps = 24/262 (9%) Query: 222 INSFEELDPELTNHLKTKFNKKFLSVGPFKLLLASDQQPSSAT--DLDDKYGCLAWLDKQ 279 +++F+EL+PE+ K+ K + P L + + P++A D C+ WLD Sbjct: 1 MDTFQELEPEVI-----KYMSKICPIKPVGPLYKNPKVPNAAVRGDFMKADDCIEWLDS- 54 Query: 280 KKKPASVAYVGFGTVATPSPNEIAAIAEDQPGPSLEASKVPFIWSLR--HRSQA----NL 333 K P+SV Y+ FG+V +++ IA L S V F+W ++ H+ L Sbjct: 55 -KPPSSVVYISFGSVVYLKQDQVDEIAY-----GLLNSGVQFLWVMKPPHKDAGLELLVL 108 Query: 334 PNGFLERTRSDGIVVDWATQVNVLAHEAVGVFVTHCGWGSILESIAAGVPMIGRPFFGDQ 393 P GFLE+ G +V W+ Q VLAH +V FVTHCGW S +E++++G+P++ P +GDQ Sbjct: 109 PEGFLEKAGDKGKMVQWSPQEQVLAHPSVACFVTHCGWNSSMEALSSGMPVVAFPQWGDQ 168 Query: 394 RINGRMMEQIWGVGIAVDGG----GICTKEGLLSSLDLILCQEKGIKIREKVTKLKQLCQ 449 + + + ++ VG+ + G + T++ + L EK ++++ K K+ + Sbjct: 169 VTDAKYLVDVFKVGVRMCRGEAENKLITRDEVEKCLIEATTGEKAAELKQNAMKWKKAAE 228 Query: 450 NAIGPGGSSMQNLDALVDMISR 471 A+ GGSS +NL VD +SR Sbjct: 229 EAVAEGGSSDRNLQEFVDEVSR 250 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs95618 (131 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv30823 144 6e-37 >Vv30823 Length = 277 Score = 144 bits (363), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 63/110 (57%), Positives = 85/110 (77%) Query: 22 KSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGW 81 + G+ G + + E K++DP G +L NQ GE+ +RGP IMKGY ++PEAT +T+D GW Sbjct: 93 RYGTAGLLSPSMEAKIVDPGSGKALTVNQTGELWLRGPTIMKGYFSNPEATTSTLDSSGW 152 Query: 82 LHTGDIGYVDDDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIGDA 131 L TGD+ Y+DDD +FIVDR+KE+IK+KG+QVPPAE+EALLL+HP I DA Sbjct: 153 LRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPEIADA 202 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs56347 (259 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4327 370 e-104 >Vv4327 Length = 369 Score = 370 bits (949), Expect = e-104, Method: Compositional matrix adjust. Identities = 174/214 (81%), Positives = 197/214 (92%) Query: 33 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPT 92 FFVFGDSLVD+GNN+YL TTARADSPPYGIDYPT RPTGRFSNGLNIPD IS+ IG +PT Sbjct: 34 FFVFGDSLVDSGNNDYLVTTARADSPPYGIDYPTHRPTGRFSNGLNIPDIISEQIGEQPT 93 Query: 93 LPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGP 152 LPYLSPELTG RLLVGANFASAGIGILNDTGIQF+NIIR+++Q EYFQ+YQ RVT LIG Sbjct: 94 LPYLSPELTGERLLVGANFASAGIGILNDTGIQFLNIIRIYKQLEYFQQYQQRVTTLIGA 153 Query: 153 QRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDL 212 +T++LVN AL+LIT+GGNDFVNNYYLVP+SARSRQFSLPDYV+Y+ISEYRK+L RL++L Sbjct: 154 AQTERLVNQALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVRYLISEYRKVLRRLYEL 213 Query: 213 GARRVLVTGTGPLGCVPAERAMRGRNGQCAADLH 246 GARRVLVTGTGP+GCVPAE AMR RNG+CA +L Sbjct: 214 GARRVLVTGTGPMGCVPAELAMRSRNGECAVELQ 247 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16121 (249 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs48016 (254 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv161 105 7e-25 >Vv161 Length = 95 Score = 105 bits (262), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 48/94 (51%), Positives = 69/94 (73%) Query: 65 MREVASAQDLVESLWHAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEE 124 M ++ S Q+ + +L AGDKLV+V+F+ C C+AL PK+C+ A+ P++ FL+VN++E Sbjct: 1 MIDIHSMQEFLSALSQAGDKLVIVEFYGTWCASCRALFPKLCKTAQDYPNIIFLKVNFDE 60 Query: 125 HKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNA 158 +KSMC SLNV +LP F FYRG+ G L SFSC+ A Sbjct: 61 NKSMCKSLNVKMLPCFHFYRGSDGLLESFSCSLA 94 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs31770 (397 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs810 (224 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv13466261 98 1e-22 >Vv13466261 Length = 160 Score = 98.2 bits (243), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 10/159 (6%) Query: 68 LKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENP 127 + YL+A+V E LR +PPG ED GY +PK + + +L+ +P++WENP Sbjct: 1 MPYLKAVVLEGLRRHPPGHFVLPHSVTEDVSFEGYDIPKNATVNFIVSELNWNPKIWENP 60 Query: 128 CEFRPERFLTTHADVD----------VNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLAR 177 EF+PERFL + D D ++ + +PF GRR CPG + ++ +A Sbjct: 61 MEFKPERFLDINGDGDHGDEGEAFDITGSREIKMMPFGAGRRICPGYGLAMLHLEYFVAN 120 Query: 178 ILQGFDLATVGGTPVGMQIGLGLALPKSNPLEVIIKPRL 216 ++ FD V G V + L + NPL+ + PRL Sbjct: 121 LVWNFDWKAVEGDEVDLSEKLEFTVVMKNPLQAHLSPRL 159 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs15066 (151 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88301 (125 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs83058 (134 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs74790 (135 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs58068 (194 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv37731 170 2e-44 >Vv37731 Length = 359 Score = 170 bits (430), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 87/158 (55%), Positives = 106/158 (67%), Gaps = 18/158 (11%) Query: 53 NAGDDDERDSAPPAKAQVVGWPPIRSYRKNTLQVQAKTSESELCRG---MYVKVSMDGAP 109 + G + SAP KAQVVGWPPIRS+RKNTL +K +E + G ++VKVSMDGAP Sbjct: 191 HTGTGNNNSSAPATKAQVVGWPPIRSFRKNTLATTSKNTEVDGKAGPGALFVKVSMDGAP 250 Query: 110 YLRKIDLKVYTCYPELLNALENMFQ-LTIGKYSE--------------REGYNGSDYAPT 154 YLRK+DL+ Y+ Y EL +ALE MF TIG+Y ++ +GS+Y T Sbjct: 251 YLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGAPGREMLSESKLKDLLHGSEYVLT 310 Query: 155 YEDKDGDWMLVGDVPWDMFITTCKRLRIMRGSEAKGLA 192 YEDKDGDWMLVGDVPW MFI TCKRLRIM+ +A GLA Sbjct: 311 YEDKDGDWMLVGDVPWQMFIETCKRLRIMKSCDAIGLA 348 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs99128 (302 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv26451 433 e-123 >Vv26451 Length = 305 Score = 433 bits (1114), Expect = e-123, Method: Compositional matrix adjust. Identities = 205/308 (66%), Positives = 239/308 (77%), Gaps = 9/308 (2%) Query: 1 MRDFPSCFGENGVQVADXXXXXXXGATKAAQNLVACVYQCKLHGRLVLINVTWTKNLMGQ 60 MRDFPSCFGENGVQVAD ATK AQNLV CVYQC+L GR LI V W+KNLMGQ Sbjct: 1 MRDFPSCFGENGVQVADSSSS---NATKTAQNLVTCVYQCRLRGRSCLITVVWSKNLMGQ 57 Query: 61 GLCVAVDDSTNQCLCKVEIKPWLFSKRKGSKNLEVDSSRVDIYWDLSGARFGSGPEPVEG 120 GL V +DDS NQ LCKV+IKPWLFSKRKGSK+LE +SS++DIYWD S A+FGSGPEP+EG Sbjct: 58 GLSVGIDDSANQSLCKVDIKPWLFSKRKGSKSLEANSSKIDIYWDFSSAKFGSGPEPLEG 117 Query: 121 YYLAVAYNQEMVLLLGDLKKEAYRKINAAPINSNPIFIAKREHIFGKKFYGAKAQFCDKG 180 +Y+ V ++++MVLLLGDL+KEA++K NA P+ SN +FIAKRE+IFGKK + KAQFCD G Sbjct: 118 FYVGVVFDRQMVLLLGDLRKEAFKKTNATPVPSNAVFIAKRENIFGKKVFRTKAQFCDNG 177 Query: 181 LTHDITIECDTIDVKDPCLVIRIDSKTVMQVKRLKWKFRGNHTILVDGLPVEVFWDVHNW 240 HD+ IECDTI V DPCLVIR+DSK VMQVK+L+WKFRGNHTI VDGL VEVFWDVHNW Sbjct: 178 QIHDVMIECDTIGVTDPCLVIRVDSKIVMQVKQLRWKFRGNHTIAVDGLAVEVFWDVHNW 237 Query: 241 LFGNAMGNAVFMFQTCLSAEKFWACQSAF------DPSVLTWSYSQRFKDNXXXXXXXXX 294 LF +GNAVF+F+TCLSAEK WA Q DP+V+T S SQRF+D+ Sbjct: 238 LFSTTLGNAVFLFKTCLSAEKLWASQPLSDPNVFRDPNVVTLSCSQRFRDSQSQALSFSL 297 Query: 295 XXXAWKNE 302 A KNE Sbjct: 298 ILHALKNE 305 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41318 (93 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96617 (103 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv24808 69 3e-14 >Vv24808 Length = 170 Score = 68.6 bits (166), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 12/100 (12%) Query: 3 DGYSGSDLKSLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASAPLYNSVDVRPLNMDDFKY 62 +GYSGSDLK+LCV AA+ P + + V +R L +DDF Sbjct: 81 EGYSGSDLKNLCVAAAYRPVQELLEEE----------QKGGGDILPPV-LRSLTLDDFIK 129 Query: 63 AHDHVCASVSSESTHMNELLQWNELYGEGGSRKRKSLSYF 102 + V SV+ ++ MNEL +WNE YGEGGSR RKSL F Sbjct: 130 SKAKVGPSVAFDAASMNELRKWNEQYGEGGSR-RKSLFGF 168 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs77665 (197 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104312 (223 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs124106186 (226 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs73386 (634 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs1996 (156 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82956 (82 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41088 (299 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv32818 298 7e-83 >Vv32818 Length = 296 Score = 298 bits (764), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 152/188 (80%), Positives = 155/188 (82%), Gaps = 2/188 (1%) Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEE+RDAED Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60 Query: 61 AIRGRDGYDFDGHRLRVELAXXXXXXXXX--XXXXXXXXXXXXXXXXXXEYRVLVTGLPS 118 AIRGRDGYDFDGHRLRVELA EYRVLVTGLPS Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120 Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178 SASWQDLKDHMRRAGDVCFSQVF DG GT GIVDYTNYDDMK AI+KLDDSEFRNAFSRA Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRA 180 Query: 179 YVRVREYD 186 YVRV+EYD Sbjct: 181 YVRVKEYD 188 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs45089 (160 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv42089 61 8e-12 >Vv42089 Length = 271 Score = 61.2 bits (147), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 8/124 (6%) Query: 24 SGCILCTASVTGLLGGLAQHTYSVSKSAIIGLVKSMAAELCEYGIRINCISPFAIPTPFV 83 +G I+ +SV G++ Y+ +K+A+ + KS+A E + IR NC++PF TP + Sbjct: 147 AGSIVFISSVAGVVSTGTGSIYAATKAAMNQITKSLACEWAKDNIRSNCVAPFCTRTPLI 206 Query: 84 MEEMSQIYAGVDASRLLELVYSTGVLEGTHCEPNDIANAALYLASDDAKYVSGHNLVVDG 143 + +++ S + E+V T + G EP +I++ A +L A Y++G + VDG Sbjct: 207 EQMLAK------KSMMEEVVSRTPL--GRPGEPQEISSLATFLCMPCASYITGQVISVDG 258 Query: 144 GFTS 147 G T+ Sbjct: 259 GLTA 262 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16961 (301 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3113 325 9e-91 >Vv3113 Length = 393 Score = 325 bits (832), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 165/269 (61%), Positives = 202/269 (75%), Gaps = 9/269 (3%) Query: 10 VIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP 69 VI+VGAG SGLATAA L+L SIP ++LERE+C+A +W+K SYDRL LHL KQ C+L H+P Sbjct: 21 VIVVGAGPSGLATAASLNLLSIPNIVLEREDCFAPLWQKKSYDRLHLHLPKQACELAHMP 80 Query: 70 FPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPG 129 P+SYP + SR QFI++L YVSHF I P Y R VESAS+DE T W VK + Sbjct: 81 MPTSYPTYPSRLQFIQYLRDYVSHFGISPV--YHRLVESASFDEVTEKWKVKVRVINGGS 138 Query: 130 REIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNV 189 EIEEY S RFLVVASGET++ F P++ GL SF GEV+HSTQYK GK Y K V Sbjct: 139 DEIEEY-SCRFLVVASGETSDAFIPEVEGLSSF------KGEVLHSTQYKCGKEYAEKTV 191 Query: 190 LVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYLGVVLFKYGPFGWVDTLMVM 249 LVVGSGNSGMEIALDL+N+ AKTS+VVRSPVH+LS+E+++LG+ L +Y PF V+ L VM Sbjct: 192 LVVGSGNSGMEIALDLSNYGAKTSIVVRSPVHILSKEIMHLGLFLARYLPFNMVEYLTVM 251 Query: 250 LSRLGYGDLSKYGIPKPREGPFFMKAAYG 278 LS++ YGDL+KYGI + EGPF +KA YG Sbjct: 252 LSKIMYGDLTKYGIIRHEEGPFTVKAKYG 280 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs12231 (62 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs106107 (202 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93559 (300 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv8600 112 7e-27 >Vv8600 Length = 128 Score = 112 bits (281), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 53/120 (44%), Positives = 76/120 (63%), Gaps = 2/120 (1%) Query: 181 ENRVTLPSWFSEQDLSFYATKFNQTGFTGALNYYRAMNLNWEMTAAWTEVQVKVPVKFIV 240 E LP+W +E++L YA KF ++GFTG LNYYRAM+L+WE+ A W ++ +P K I Sbjct: 8 ETPSLLPTWITEEELGVYADKFQESGFTGGLNYYRAMDLSWELLAPWQGSKITIPSKLIF 67 Query: 241 GELDMVYTTPGIKEYVHNGGFKKDVPLLEEIVVIEDAGHFINQERAEEINAHIYDFIKKF 300 G+ D+ + G KEY+ FK VP E VVI D HFI +E+ ++++A I F+ KF Sbjct: 68 GDKDIGFKDGGTKEYIEGNTFKTLVPDHE--VVILDGHHFIQEEKPQQVSAEILSFLAKF 125 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93079 (56 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82881 (287 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41998 (349 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv35733 90 6e-20 >Vv35733 Length = 262 Score = 89.7 bits (221), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 10/132 (7%) Query: 221 ELESEAFTVVPELLPI---GPLLAGNRLGNSA--GHFWREDSSCLEWLDQQQPSSVLYAP 275 ELE E + ++ PI GPL ++ N+A G F + D C+EWLD + PSSV+Y Sbjct: 6 ELEPEVIKYMSKICPIKPVGPLYKNPKVPNAAVRGDFMKADD-CIEWLDSKPPSSVVYIS 64 Query: 276 FGNLTILDQVHFQELAFGLKLCNRPFLWVVRPDITTDANDR---YPDGFQERVSARGRMI 332 FG++ L Q E+A+GL FLWV++P DA P+GF E+ +G+M+ Sbjct: 65 FGSVVYLKQDQVDEIAYGLLNSGVQFLWVMKPP-HKDAGLELLVLPEGFLEKAGDKGKMV 123 Query: 333 GWAPQQKGLTHP 344 W+PQ++ L HP Sbjct: 124 QWSPQEQVLAHP 135 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69971 (173 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52106181 (312 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25947 (258 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs91748 (265 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv54598 513 e-147 >Vv54598 Length = 264 Score = 513 bits (1321), Expect = e-147, Method: Compositional matrix adjust. Identities = 245/264 (92%), Positives = 256/264 (96%) Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60 Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120 VIAILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120 Query: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 180 FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FIKFDVGNV Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180 Query: 181 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 240 VMVTGGRNRGRVG+IKNREK KGSFETIH+QDA GHEFATRLGNVF IGKGTKPWV+LPK Sbjct: 181 VMVTGGRNRGRVGVIKNREKRKGSFETIHVQDATGHEFATRLGNVFIIGKGTKPWVTLPK 240 Query: 241 GKGIKLSIIEEARKRQALATSAAA 264 GKGIKLSIIEEA+KR A +++A Sbjct: 241 GKGIKLSIIEEAQKRLAAQAASSA 264 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs40106185 (182 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv15994 146 2e-37 >Vv15994 Length = 269 Score = 146 bits (369), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 61/116 (52%), Positives = 85/116 (73%) Query: 1 MIGPADFEKSVDYWQQDKWSGQFPVKWHTIKDVPNSQFRHIVLENNDNKPVTNSRDTQEV 60 M+G DF K +D+WQ DKW+G FPVKWH +KD+PNSQ RHI LE+N+N+ VT +RDTQE+ Sbjct: 83 MVGQVDFNKDMDFWQLDKWNGFFPVKWHIVKDIPNSQLRHITLESNENRSVTYTRDTQEI 142 Query: 61 KLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQKAMQERKARQQASLMAVGVVGEND 116 L+QG+EML IFKNY S+ DDF+FYE+R+K++ R++ + + + G D Sbjct: 143 GLKQGVEMLKIFKNYSARTSMFDDFNFYENREKSLHARRSSKPPPPSQMEIYGNGD 198 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs153106186 (260 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs153106187 (200 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41343 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv17018 228 4e-62 >Vv17018 Length = 164 Score = 228 bits (581), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 108/164 (65%), Positives = 130/164 (79%), Gaps = 1/164 (0%) Query: 3 SNNRSIGVALDFSKGSKLALKWAIDNLLEKGDTLYIIHIKLPQDDESRNLLWSDTGSPLI 62 + +R IGVA+DFS+GS +ALKWAIDNLL+KGDTL+ IH+K Q DESRNLLWS TGSPLI Sbjct: 2 AKDRKIGVAVDFSQGSNIALKWAIDNLLDKGDTLFFIHVKPSQGDESRNLLWSATGSPLI 61 Query: 63 PLEEFRDQEVMKQYEXXXXXXXXXXXXAASKQKHVSVVAKLYWGDARDKLCEAVEAMKLD 122 PLEEFRD +V ++YE AS QK ++AK+YWGDARDKLC+AV +KLD Sbjct: 62 PLEEFRDLDVAQKYEINLDPEFLGMLATASSQKKAKIIAKIYWGDARDKLCDAVAELKLD 121 Query: 123 SLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVKDPSAAHGI 166 SLVMGSRGLGTIQR LGSV+N+V+ +A+CPVTIVKDPS +HG Sbjct: 122 SLVMGSRGLGTIQRTFLGSVTNYVMVHATCPVTIVKDPS-SHGF 164 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs58462 (290 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv47574 195 7e-52 >Vv47574 Length = 207 Score = 195 bits (496), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 94/214 (43%), Positives = 138/214 (64%), Gaps = 30/214 (14%) Query: 61 VSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIRKVIFT 120 V L+K YG+TLAGLRA+GY D DD+HS+VHGRLPY ++KPD LR+LL S+ +RK+I T Sbjct: 2 VELFKNYGSTLAGLRALGYNIDADDYHSFVHGRLPYELIKPDSQLRSLLRSIALRKIILT 61 Query: 121 NADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCS 180 N+D+ HA +VL RLGL+DCF++II FET+N + +S R +D++ Sbjct: 62 NSDRNHAIKVLDRLGLQDCFDQIICFETMNP----------NLPKSTR------LDEF-- 103 Query: 181 RPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 PV+ P +A + AN+NP +T+F DD++RN+ GK LGL TV VG Sbjct: 104 -----------PVILNPSLDAMKIALDAANVNPPRTLFLDDNVRNIAAGKALGLRTVLVG 152 Query: 241 TSHRAEGVDYALESIHNIKEALPELWEVAGENSE 274 + + + DY LE++HN+ + +PE+W + G++ E Sbjct: 153 KTMKTKEADYVLETVHNLAQVIPEIW-LGGKDGE 185 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104404 (158 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104928 (72 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs183106187 (300 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv31003 112 1e-26 >Vv31003 Length = 427 Score = 112 bits (279), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/260 (31%), Positives = 125/260 (48%), Gaps = 30/260 (11%) Query: 2 VLSKLQHPHLVTLLGACPEAWS--LVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAE 58 LS + HP+LV L+G C E LVYEY+P GSL++ L PL W R +IAA Sbjct: 159 TLSSVDHPNLVKLIGYCAEGDQRLLVYEYMPLGSLENHLHDLPPGTKPLDWNSRMKIAAG 218 Query: 59 IASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV-TEDTLYLPSFHRST 117 A GL +LH +++ DLK NILL K+ DFG+ ++ T D H ST Sbjct: 219 AAKGLEYLHDKMYPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPTGDKT-----HVST 273 Query: 118 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCG----- 172 G++ Y P+Y TG LT KSD YSF +++L+L+TGR + + R Sbjct: 274 RVMGTYGYCAPDYAMTGQLTFKSDIYSFRVVLLELITGRKAIDNSKGAREQNLVAWARPL 333 Query: 173 -----KLSSILDPLA-GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAE 226 K S + DPL G +P + + + C + E+P++ P + + L+ Sbjct: 334 FKDRRKFSQMADPLLHGQYPVRGLYQALAIAAMCVQ----EQPNMRPLIADVVTALNYLA 389 Query: 227 ERPVPSFFLCPILQEIMHDP 246 + ++ +E +H P Sbjct: 390 SQTTLTY------REFLHFP 403 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs23635 (278 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3623 130 2e-32 >Vv3623 Length = 481 Score = 130 bits (328), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 110/221 (49%), Gaps = 8/221 (3%) Query: 27 LPGFDGDLPFKLETGYIGVGQNDDVQLFYYFIESERSPEDDPLVLWLTGGPGCSGFS-GL 85 LPG + FK GY+ V + LFYYF E+ P PL+LWL GGPGCS G Sbjct: 74 LPGQPSGVLFKQYAGYVTVNELKGRNLFYYFAEAAEDPSSKPLLLWLNGGPGCSSLGVGA 133 Query: 86 VFEIGPLSFDYEKSKVNLPKFLLNPYSWTKVANIIFLDAPVGTGFSYANTWQGYIMN-DT 144 + EIGP K + L PY+W KVAN +FL++PVG GFSY+N Y N D Sbjct: 134 MVEIGPFGV-----KPDGKTLYLRPYAWNKVANTLFLESPVGVGFSYSNNSFEYNENGDK 188 Query: 145 LSAAQNYYFLRKWLIAHPSFLANPLYIGGDSYSGIIVPMIVQH-ISDGIDVGHRPRMNLK 203 +A Y FL W P + YI G+SY+G +P + I + ++LK Sbjct: 189 RTAQDTYAFLINWFRRFPHYKNRDFYIMGESYAGFYIPELADTIIRRNMKADSSSIIHLK 248 Query: 204 GYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQ 244 G ++GN + + + + + +ALIS + ++ C+ Sbjct: 249 GIMIGNGIMNDMTDNRGFYDYLWSHALISDKTHQGLVEYCK 289 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs79752 (267 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs53949 (257 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv35733 199 5e-53 >Vv35733 Length = 262 Score = 199 bits (506), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 103/240 (42%), Positives = 154/240 (64%), Gaps = 10/240 (4%) Query: 1 MSQLCPIRXXXXXXXXXXXXQDEKLDVGVER--WKPEDRCLEWLNKQSNSSVVYISFGSL 58 MS++CPI+ ++ K+ R + D C+EWL+ + SSVVYISFGS+ Sbjct: 15 MSKICPIKPVGPLY------KNPKVPNAAVRGDFMKADDCIEWLDSKPPSSVVYISFGSV 68 Query: 59 AQLSANQMEVIATALKNIKLPFLWIVKQSESASSDGEGTLPLWFLEETKNRGLVVSWCPQ 118 L +Q++ IA L N + FLW++K + LP FLE+ ++G +V W PQ Sbjct: 69 VYLKQDQVDEIAYGLLNSGVQFLWVMKPPHKDAGLELLVLPEGFLEKAGDKGKMVQWSPQ 128 Query: 119 TKVLAHPALACFVTHCGWSSLLETIVAGVPVIAYPQWSDQPTNAKLVADVFKIGLRL--R 176 +VLAHP++ACFVTHCGW+S +E + +G+PV+A+PQW DQ T+AK + DVFK+G+R+ Sbjct: 129 EQVLAHPSVACFVTHCGWNSSMEALSSGMPVVAFPQWGDQVTDAKYLVDVFKVGVRMCRG 188 Query: 177 PSEDGFVGNEELEKCVEEIINGPKSEYYKKNAVELKHAARQAVAGGGSSDQNIQLFADEI 236 +E+ + +E+EKC+ E G K+ K+NA++ K AA +AVA GGSSD+N+Q F DE+ Sbjct: 189 EAENKLITRDEVEKCLIEATTGEKAAELKQNAMKWKKAAEEAVAEGGSSDRNLQEFVDEV 248 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs38466 (205 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs38962 (274 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs48626 (192 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv55987 350 8e-99 >Vv55987 Length = 294 Score = 350 bits (899), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 166/192 (86%), Positives = 176/192 (91%) Query: 1 MKTKNRADRSGVVAAGEKESRTSSPSFSKAGPPKLELQMGRKWVVENQIGRKNLVIDDCD 60 MKTKNRADRSGVV AG+KE R SSPSFSKAGPPKLELQMGRKWVVENQIGRKNLVIDDCD Sbjct: 103 MKTKNRADRSGVVGAGQKEGRVSSPSFSKAGPPKLELQMGRKWVVENQIGRKNLVIDDCD 162 Query: 61 AKQSVYVFGCKDSVLQIQGKVNNITIDKCTKMGVVFKDVVAAFEIVNCNGVEAQCQGSAP 120 AKQSVYV+GCKDSVL+IQGKVNNITIDKCTKMG+VF DVVAA E+VNCN VE QCQGSAP Sbjct: 163 AKQSVYVYGCKDSVLKIQGKVNNITIDKCTKMGIVFADVVAACEVVNCNSVEVQCQGSAP 222 Query: 121 TISVDNTGGCQLYLSQDSLGASITTAKSSEINVLVPGAGPDSDWAEHALPQQFVHTYKDG 180 TISVDNT GCQLYL +D+L ASITTAKSSEINVLVPGA PD DW EHALPQQ++H +KDG Sbjct: 223 TISVDNTAGCQLYLGKDALEASITTAKSSEINVLVPGAEPDGDWGEHALPQQYIHVFKDG 282 Query: 181 HFETTPVSHSGG 192 F TTPVSHSGG Sbjct: 283 QFVTTPVSHSGG 294 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs98310 (347 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs98309 (221 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs70312 (241 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv10638 176 5e-46 >Vv10638 Length = 428 Score = 176 bits (445), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 84/131 (64%), Positives = 106/131 (80%), Gaps = 2/131 (1%) Query: 1 ISSSDSFLHGGERPTLSVQSRGHALHVFVNGQLTGSASGTRTYKRFTFRGNVNLHAGVNT 60 I SS+SFL G+ PTL+VQS+GHA+HVF+NGQ +GSA GTR ++FT+ G NLHAG N Sbjct: 284 IDSSESFLRRGQTPTLTVQSKGHAVHVFINGQYSGSAYGTRENRKFTYTGAANLHAGTNR 343 Query: 61 ISLLSIAVGLPNNGPHFESYKTGVLGPVVLHGIDEGKRDLSWHKWSYKIGLQGEAMVTGL 120 I+LLSIAVGLPN G HFE++KTG+LGPV+LHGID+GKRDLSW KWSY++GL+GEAM L Sbjct: 344 IALLSIAVGLPNVGLHFETWKTGILGPVLLHGIDQGKRDLSWQKWSYQVGLKGEAM--NL 401 Query: 121 GSQSSIPFVSW 131 S + + + W Sbjct: 402 VSPNGVSAIEW 412 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs102609 (213 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv13185 339 2e-95 >Vv13185 Length = 413 Score = 339 bits (870), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 163/210 (77%), Positives = 180/210 (85%) Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60 MGLFLQKTNIIRDYLEDINEIPK RMFWPREIWSKYVNKLEDLK EENS KAVQCLNDMV Sbjct: 201 MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLKEEENSIKAVQCLNDMV 260 Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120 TNAL+H+EDCLKYMSAL+ AIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK Sbjct: 261 TNALIHMEDCLKYMSALQSPAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 320 Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSYI 180 VIDRT M+DVY AF+DFS +LK K++KNDPNATK LSR+EA+QK C +SG L KRKSY+ Sbjct: 321 VIDRTKTMSDVYGAFFDFSCMLKSKVDKNDPNATKALSRLEAVQKICRESGALTKRKSYV 380 Query: 181 IQSELRYSSTMXXXXXXXXXXXXSYLSSTR 210 I+SE RY+S + +YLS+ R Sbjct: 381 IRSEPRYNSALIVAFFIILSIIFAYLSANR 410 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs103630 (345 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv19104 633 0.0 >Vv19104 Length = 398 Score = 633 bits (1633), Expect = 0.0, Method: Compositional matrix adjust. Identities = 304/331 (91%), Positives = 320/331 (96%), Gaps = 1/331 (0%) Query: 14 PVLDKSEWVKGQAIRQSTVSV-RSLPSGPSALTIRAGSYADELVKTAKTVASPGRGILAM 72 PVLDKS+WVKGQ +RQS+VSV R LP+ PS LTIRAGSYADELVKTAKT+ASPGRGILAM Sbjct: 13 PVLDKSDWVKGQTLRQSSVSVIRCLPTAPSGLTIRAGSYADELVKTAKTIASPGRGILAM 72 Query: 73 DESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKM 132 DESNATCGKRLASIGLENTEANRQAYRTLLVT PGLG +ISGAILFEETLYQSTTDGKKM Sbjct: 73 DESNATCGKRLASIGLENTEANRQAYRTLLVTVPGLGNHISGAILFEETLYQSTTDGKKM 132 Query: 133 VDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI 192 VDVLVEQ IVPGIKVDKGLVPL GSNDESWCQGLDGLASR+AAYYQQGARFAKWRTVVSI Sbjct: 133 VDVLVEQKIVPGIKVDKGLVPLVGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSI 192 Query: 193 PNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFF 252 PNGPSALA+KEAAWGLARYAAI+QDNGLVPIVEPEILLDG+HGI+RTFEVA+KVWAEVFF Sbjct: 193 PNGPSALALKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIERTFEVAQKVWAEVFF 252 Query: 253 YLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQ 312 YLAENNVMFEGILLKPSMVTPGAECK++ATP+QVA+YTLKLL RRIPPAVPGIMFLSGGQ Sbjct: 253 YLAENNVMFEGILLKPSMVTPGAECKDRATPEQVADYTLKLLKRRIPPAVPGIMFLSGGQ 312 Query: 313 SEVEATLNLNAMNQGPNPWHVSFSYARALQT 343 SEVEATLNLNAMNQGPNPWHVSFSYARALQ Sbjct: 313 SEVEATLNLNAMNQGPNPWHVSFSYARALQN 343 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs17317 (134 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93976 (219 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs76267 (106 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs37597 (375 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs98427 (298 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64062 (231 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv55522 238 8e-65 >Vv55522 Length = 177 Score = 238 bits (606), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 114/144 (79%), Positives = 127/144 (88%) Query: 68 RQVVERRRVLISSIGLLAVALFNASKDGVVLAAEFADMPALRGKDYGKTKMRYPDYIETE 127 R V RR + SIGLLA A++NAS++ V +A+EF DMPALRGKDYGKTKMR+PDY ET Sbjct: 30 RPVFGRREAAMLSIGLLAGAIWNASENEVAVASEFTDMPALRGKDYGKTKMRFPDYTETA 89 Query: 128 SGLQYKDLRQGSGPKPKMGETVVVDWDGYTIGYYGRIFEARNKTKGGSFEGDDKDYFKFR 187 SGLQYKDLR GSGP PK+GETVVVDWDGYTIGYYGRIFEARNKTKGGSF+GDDKD+FKFR Sbjct: 90 SGLQYKDLRVGSGPSPKVGETVVVDWDGYTIGYYGRIFEARNKTKGGSFQGDDKDFFKFR 149 Query: 188 LGSQDVIPAFEEAVSGMALGGVRS 211 +GSQ VIPAFEEAVSGM+LG VRS Sbjct: 150 VGSQQVIPAFEEAVSGMSLGSVRS 173 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs34732 (137 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs95125 (176 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs49042 (183 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs40066 (270 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18393 (80 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs22449 (278 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv53517 356 e-100 >Vv53517 Length = 201 Score = 356 bits (914), Expect = e-100, Method: Compositional matrix adjust. Identities = 164/175 (93%), Positives = 172/175 (98%) Query: 1 MLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 60 MLDHPF+PALYASFQTKTH+CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL Sbjct: 27 MLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL 86 Query: 61 EYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 120 EYLHCQG+IYRDLKPENVLLQ +GHV+LTDFDLSCLTSCKPQLL+P TNEKKR+HKGQQN Sbjct: 87 EYLHCQGVIYRDLKPENVLLQSSGHVALTDFDLSCLTSCKPQLLMPNTNEKKRQHKGQQN 146 Query: 121 PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 175 P+FMAEPMRASNSFVGTEEYIAPEII GAGHTSAVDWWALGILLYEMLYGYTPFR Sbjct: 147 PIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFR 201 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs34675 (179 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41944 (375 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv59489 697 0.0 >Vv59489 Length = 375 Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/375 (87%), Positives = 351/375 (93%) Query: 1 MADVAQVNGVGQTADFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSV 60 M D + + GQ +DFPAVPTHGG F Q+NIFGNLFEITAKYRPPIMPIGRGAYGIVCSV Sbjct: 1 MVDNTRNSTGGQLSDFPAVPTHGGLFFQHNIFGNLFEITAKYRPPIMPIGRGAYGIVCSV 60 Query: 61 LNTETNELVAIKKIANAFDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDV 120 LN+ETNE+VAIKKIANAFDNHMDAKRTLREIKLL+H DHENVI ++DVVPPPLRREF+DV Sbjct: 61 LNSETNEMVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIGIRDVVPPPLRREFSDV 120 Query: 121 YIAAELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNAN 180 YIA ELMDTDLHQIIRSNQ LSEEHCQYFLYQ+LRGLKYIHSANVIHRDLKPSNLLLNAN Sbjct: 121 YIATELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNAN 180 Query: 181 CDLKICDFGLARPTSENEFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMNR 240 CDLKICDFGLARPT+ENEFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMNR Sbjct: 181 CDLKICDFGLARPTAENEFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMNR 240 Query: 241 RPLFPGKDHVHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHP 300 RPLF GKDHVHQMRLL ELLGTPT++DLGFVRN+DA+RYI QLPQHPRQ L VFPH+HP Sbjct: 241 RPLFAGKDHVHQMRLLTELLGTPTESDLGFVRNDDARRYIMQLPQHPRQPLVNVFPHIHP 300 Query: 301 LAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIK 360 LAIDL+DRMLTFDP KRITV+EALAHPYL+RLHD ADEPVCPEPFSF+FEQQ+L EEQ+K Sbjct: 301 LAIDLIDRMLTFDPTKRITVEEALAHPYLSRLHDTADEPVCPEPFSFEFEQQALVEEQMK 360 Query: 361 DMIYQEALALNPGFA 375 DMIYQEAL NPG+A Sbjct: 361 DMIYQEALFFNPGYA 375 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs53149 (737 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv10638 526 e-151 >Vv10638 Length = 428 Score = 526 bits (1355), Expect = e-151, Method: Compositional matrix adjust. Identities = 242/392 (61%), Positives = 304/392 (77%), Gaps = 2/392 (0%) Query: 229 MCKQDDAPDPVINTCNGFYCEKFVPNQNYKPKMWTEAWTGWFTEFGSAVPTRPAEDLVFS 288 MCK+DDAP+PVIN C GFYC+ F PN+ YKP++WTEAW+GWFTEFG + RP +DL F Sbjct: 22 MCKKDDAPNPVINACKGFYCDAFSPNKPYKPRIWTEAWSGWFTEFGGTIHRRPVQDLAFG 81 Query: 289 VARFIQSGGSFINYYMYHGGTNFGRTSGG-FVATSYDYDAPIDEYGLLNEPKWGHLRGLH 347 VARFIQ+GGSF+NYYMYHGGTNFGR++GG F+ TSYDYDAPIDEYGL+ +PK+GHL+ LH Sbjct: 82 VARFIQNGGSFVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYGHLKELH 141 Query: 348 KAIKLCEPALVSVDPTVKSLGENQEAHVFNSISGKCAAFLANYDTTFSAKVSFGNAQYDL 407 KAIKLCE A+VS DPTV SLG Q+AHVF+S G CAAFL+NY+ SA+V F N YDL Sbjct: 142 KAIKLCEHAVVSADPTVISLGSYQQAHVFSSGRGNCAAFLSNYNPKSSARVIFNNVHYDL 201 Query: 408 PPWSISVLPDCKTAVFNTARVGVQSSQKKFVPVINAF-SWQSYIEETASSTDDNTFTKDG 466 P WSIS+LPDC+T VFNTARVGVQ+S + P + SW++Y E+ +S T T G Sbjct: 202 PAWSISILPDCRTVVFNTARVGVQTSHMRMFPTNSKLHSWETYGEDISSLGSSGTMTAGG 261 Query: 467 LWEQVYLTADASDYLWYMTDVNIGSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVY 526 L EQ+ +T D++DYLWYMT VNI S+E FL+ GQ P LT+ S GHA+ VFINGQ SG+ Y Sbjct: 262 LLEQINITRDSTDYLWYMTSVNIDSSESFLRRGQTPTLTVQSKGHAVHVFINGQYSGSAY 321 Query: 527 GSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTR 586 G+ EN K T++ L AG N+I+LLS +VGLPNVG HFE W G+LGPV L G+++G R Sbjct: 322 GTRENRKFTYTGAANLHAGTNRIALLSIAVGLPNVGLHFETWKTGILGPVLLHGIDQGKR 381 Query: 587 DISKQKWTYKIGLKGEALSLHTVSGSSSVEWA 618 D+S QKW+Y++GLKGEA++L + +G S++EW Sbjct: 382 DLSWQKWSYQVGLKGEAMNLVSPNGVSAIEWG 413 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs26457 (135 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs101205 (220 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7008 (471 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59461 (248 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv11566260 304 1e-84 >Vv11566260 Length = 221 Score = 304 bits (778), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 159/217 (73%), Positives = 173/217 (79%), Gaps = 4/217 (1%) Query: 3 SVSSPMASQLKSSFTSPV-SRSL--LTPRGISGSPFRVVPSKRSPR-FIVKAIQSEKPTY 58 + +SPMASQLKSSFTSP SR+L +P+G+S SP R S+R+P F +KAIQSEKPTY Sbjct: 2 ATASPMASQLKSSFTSPTTSRALPVASPKGLSASPLRPFSSRRAPSSFSIKAIQSEKPTY 61 Query: 59 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPF 118 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSP+LRG+EVGLAHGFLLVGPF Sbjct: 62 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPVLRGIEVGLAHGFLLVGPF 121 Query: 119 VKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPD 178 VK GPLR+T I VVILSICLT+YGIASF EGEPS AP LTLTGR KEPD Sbjct: 122 VKTGPLRDTPIAGPAGSLAAGGLVVILSICLTMYGIASFKEGEPSIAPSLTLTGRTKEPD 181 Query: 179 QLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNXXY 215 QLQ+ADGWAK ISGV WAYFLLYVLN Y Sbjct: 182 QLQSADGWAKFTGGFFFGGISGVTWAYFLLYVLNLPY 218 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25906 (242 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv5666259 126 3e-31 >Vv5666259 Length = 300 Score = 126 bits (317), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 79/187 (42%), Positives = 101/187 (54%), Gaps = 38/187 (20%) Query: 1 MGRKCSHCGNIGHNSRTCTSHKAVXXXXXXXSSLRLFGVQLIDVXXXXXXXXXXXXXXXX 60 M R CS CGN GHNSRTCT + + LFGV++ + Sbjct: 1 MSRSCSQCGNNGHNSRTCTESGGAGAAA---NDIMLFGVRITEGAFRKSASMTNLSQYEQ 57 Query: 61 XXXXXXMDCXXXXXXXXXXXXXXXXXXXIDEDKTA-VGYLSDGLIMIPPTSNHQHQERKK 119 +D A GY SD ++ ++ + +ERK+ Sbjct: 58 -----------------------------PQDSNADAGYASDDVVH----ASARSRERKR 84 Query: 120 GVAWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFLRLASDLNKKKR 179 GV WTEEEHR FL+GL+K+GKGDWRGISR FV TRTPTQVASHAQKYFLR ++ N+++R Sbjct: 85 GVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLR-RNNHNRRRR 143 Query: 180 RSSLFDM 186 RSSLFD+ Sbjct: 144 RSSLFDI 150 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs1144 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs56306 (200 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs24178 (138 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv24666258 170 9e-45 >Vv24666258 Length = 140 Score = 170 bits (431), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 90/136 (66%), Positives = 102/136 (75%), Gaps = 4/136 (2%) Query: 6 NIGE-TEGLKTGLELVKSVSDKHLDLLRPSARY-SISK--APDTADREKGRYTLIRDPED 61 NIG+ EG + LEL KS+SDKHLDLLRPS+RY SI K A D +REKG+YTL+RD ED Sbjct: 4 NIGDDAEGQRNSLELTKSISDKHLDLLRPSSRYYSIFKGQAVDAVEREKGKYTLLRDVED 63 Query: 62 FQFGIYDKPLPCFGCGVGWFSFLLGFVFPLMWYYGTFLYFGNHCRKDPRERXXXXXXXXX 121 FQ GIYDKPLPCFGCG+GWFSFLLGF+ PLMWYY T LYFGN RKDPRER Sbjct: 64 FQVGIYDKPLPCFGCGIGWFSFLLGFLCPLMWYYATILYFGNCYRKDPRERAGLAASAIA 123 Query: 122 XXXCSVVMLVIVVFRL 137 CS V+L+I+ FRL Sbjct: 124 AMACSAVLLIILAFRL 139 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs101535 (297 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv30250 322 4e-90 >Vv30250 Length = 404 Score = 322 bits (826), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 190/284 (66%), Positives = 197/284 (69%), Gaps = 39/284 (13%) Query: 2 DLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPII 61 DL IDLVIEGTGVFVDR+GAGKHIQAGAKKVLITAPGKGDIPTYVVGVNAD Y DEPII Sbjct: 157 DLDIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADEYNHDEPII 216 Query: 62 SNASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIHLRKRQKVTQLDDRIFPMCA 121 SNASCTTNCLAPFVKVLDQKFG Sbjct: 217 SNASCTTNCLAPFVKVLDQKFG-------------------------------------- 238 Query: 122 GIIKGTMTTTHSYTGDQRLLDASHRDLRRARSAALNIVPTSTXXXXXXXXXXXXXXXXXN 181 IIKGTMTTTHSYTGDQRLLDASHRDLRRAR+AALNIVPTST N Sbjct: 239 -IIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLN 297 Query: 182 GIALRVPTPNXXXXXXXXXXSKITFAEDVNAAFRDSADNELKCILXVCDEPLVXVDFXCS 241 GIALRVPTPN SK TFAE+VNA FRDSA+ EL+ IL VCDEPLV VDF CS Sbjct: 298 GIALRVPTPNVSVVDLVVQVSKKTFAEEVNAGFRDSAEKELQGILSVCDEPLVSVDFRCS 357 Query: 242 DVFSNRDSSLTLVMGDXMXKVXAWYDNXWGYSQRXVDFADIXAH 285 DV S DSSLT+VMGD M KV AWYDN WGYSQR VD ADI A+ Sbjct: 358 DVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 401 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59697 (279 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs9074 (121 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs80410 (246 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv5081 401 e-114 >Vv5081 Length = 348 Score = 401 bits (1031), Expect = e-114, Method: Compositional matrix adjust. Identities = 185/234 (79%), Positives = 210/234 (89%) Query: 5 DEHRGWVFPATNTEEPGAEPDPLNGAKTIRDLYELASTNYSGKFTVPVLWDKKLKTIVNN 64 DEH GW FPA+ TEEPGAEPDPL GA++IR LYELAS NY+GK++VPVLWDKKLKTIVNN Sbjct: 114 DEHMGWAFPASETEEPGAEPDPLYGARSIRQLYELASANYTGKYSVPVLWDKKLKTIVNN 173 Query: 65 ESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPY 124 ES+EIIRM N+EFND+AENA+LDL+P + QID NEWIYN INNGVY+CGFA KQGPY Sbjct: 174 ESSEIIRMLNSEFNDMAENAALDLYPPHLQPQIDEINEWIYNRINNGVYKCGFAKKQGPY 233 Query: 125 DEAVKQVYEALDKCEEILGKQRYICGNRLTEADIRLFVTLIRFDEVYAVHFKCNKKLLRE 184 +EAV ++YEALD+CEEIL KQRYICGN L+EADIRLFVTLIRFDEVYAVHFKCNKKL+RE Sbjct: 234 NEAVGKLYEALDRCEEILSKQRYICGNLLSEADIRLFVTLIRFDEVYAVHFKCNKKLIRE 293 Query: 185 YPNLFNYTKDIYQIPSMSSTVNMQHIKRHYYGSHPSINPYGIIPLGPDIDYSSP 238 YPNL NY+KDI+QIP MSSTVNM HIKR+YYGSHPSI+P GIIP+G +DYSSP Sbjct: 294 YPNLLNYSKDIFQIPGMSSTVNMDHIKRNYYGSHPSIDPLGIIPIGSHLDYSSP 347 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs27617 (249 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv21069 131 1e-32 >Vv21069 Length = 278 Score = 131 bits (329), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 69/171 (40%), Positives = 95/171 (55%), Gaps = 2/171 (1%) Query: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRI 67 YD VTT+SP GR+FQ+EYA +AV IG++ K +V+ S+ L ++I Sbjct: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSE--LSSHQKKI 63 Query: 68 HSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYW 127 V H G+A+AGL ADGR + +SE NY Y P+PV L ++A +CT Sbjct: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSFTYESPLPVGRLVVQLADKAQVCTQRS 123 Query: 128 WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 178 W RP+G G+++ G D G LY PSG + Y AIG QAAKT +E+ Sbjct: 124 WKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER 174 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18472 (412 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv17283 712 0.0 >Vv17283 Length = 403 Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/412 (84%), Positives = 364/412 (88%), Gaps = 14/412 (3%) Query: 1 MALVKPISKFSTIATTTKPRFSYPKATCTSLSTRFCTIXXXXXXXXXXXXXXXXXXXXXN 60 MALVKPISKFST +T PR Y K S+S Sbjct: 6 MALVKPISKFST--STPNPRAPYSKVFRISMSA------------TSQPSTGKRPSKKAA 51 Query: 61 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEF 120 KTAIKETLLTPRFYTTDFDEMETLFNTEINK LNQ EFEALLQEFKTDYNQTHFVRNKEF Sbjct: 52 KTAIKETLLTPRFYTTDFDEMETLFNTEINKNLNQTEFEALLQEFKTDYNQTHFVRNKEF 111 Query: 121 KEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEAR 180 KEAADK+QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEAR Sbjct: 112 KEAADKIQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEAR 171 Query: 181 HAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKAN 240 HAGFLNKGLSDFN ALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLK N Sbjct: 172 HAGFLNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKEN 231 Query: 241 PEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLN 300 PE+Q YPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLN Sbjct: 232 PEYQLYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLN 291 Query: 301 DCQRTAFYEGIGLDTKEFDMHVIIETNRTTARIFPAVLDVENPEFKRRLDRMVEINERLL 360 DCQRT FYEGIGL+TKEFDMHVIIETNRTTARIFPAVLDVENPEFKR+LDRMVEIN++L+ Sbjct: 292 DCQRTDFYEGIGLNTKEFDMHVIIETNRTTARIFPAVLDVENPEFKRKLDRMVEINQQLI 351 Query: 361 AVGATDDIPLVKNLKRIPLIAALASELLATYLMPPVDSGSVDFAEFEPELVY 412 AVG +DDIP+VKNLK+IPLIA LASE+LA YLMPPV+SGSVDFAEFEP+LVY Sbjct: 352 AVGESDDIPVVKNLKKIPLIAGLASEILAAYLMPPVESGSVDFAEFEPQLVY 403 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42174 (337 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs101711 (179 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2810 87 2e-19 >Vv2810 Length = 235 Score = 87.0 bits (214), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 22/183 (12%) Query: 5 IAFEINNYSFRLFYDCSSPGA----SHVYFQACYFPDHLPVELMPIDTFFSDGQRGIYIS 60 +A E N FRL Y+ S GA +H++FQA Y P+E P + G G+ I Sbjct: 1 MAVEAGNPYFRLGYN--SLGAFATINHLHFQAYYLATPFPIEKAPTRKITTAG-NGVKIF 57 Query: 61 TLIDYPIKTILFEYTYNNRIIMMEAIFEICSSLREKNISYNLLISDCGKRIFLFLQ---- 116 L+ YP++ ++FE + + + + C L++ NI +N+LI+D GKRIFLF Q Sbjct: 58 ELLKYPVRGLVFEGG-DTLQDLANTVADSCICLQDNNIPFNVLIADAGKRIFLFAQCYAE 116 Query: 117 KSAISG----------NLLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQVV 166 K A+ N WE G+ + K +++ +E+ + L+ VSL++E FQ V Sbjct: 117 KQALGEVNQELLDTQVNPAVWEVSGHIVLKRKEDYEGASEQNAWRLLAEVSLSEERFQEV 176 Query: 167 KQL 169 L Sbjct: 177 NAL 179 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44201 (378 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv464 399 e-113 >Vv464 Length = 382 Score = 399 bits (1025), Expect = e-113, Method: Compositional matrix adjust. Identities = 212/378 (56%), Positives = 240/378 (63%), Gaps = 12/378 (3%) Query: 1 MEENKQCDARLTSPAAFVEGGIQDACDDACSICLEPFSDSDPSTLTSCRHEFHLQCVLEW 60 MEE+ + + LTS AAFVEGGIQ+ACDDACSICLE F DSDPST+TSC+HEFHLQC+LEW Sbjct: 6 MEESNKSECHLTSAAAFVEGGIQEACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEW 65 Query: 61 CQRSSQCPMCWQPISLKDPTSQELLEAVEQERRASVNPSRNTTIFHHPALGDFELQGLPV 120 CQRSSQCPMCWQPISLKDPTSQELLEAVE+ER NPSRN TIFHHP LGDFELQ LPV Sbjct: 66 CQRSSQCPMCWQPISLKDPTSQELLEAVERERTFRFNPSRNATIFHHPTLGDFELQHLPV 125 Query: 121 GATDAELEERIIQHLXXXXXXXXXXXXXXXESQRNRSSAQARPQFFVFSTHPNTSTADPV 180 GA DAELEERIIQHL E QR RS+AQ RPQF VFS HP+T A P Sbjct: 126 GANDAELEERIIQHLAAAAAMGRARHIARREGQRTRSAAQGRPQFLVFSAHPSTPQAGPA 185 Query: 181 SSSPTQREGEXXXXXXXXXXXXXA---AAGEESPEXXXXXXXXXXXXXXXXXX------- 230 SSSP QR GE + A GEES Sbjct: 186 SSSPAQR-GEDEPAPAITAAMPSSLPTAVGEESSRLTTSQLSSQAEEITASASGSIIHTT 244 Query: 231 XXHESTLXXXXXXXXXXXXXXDRAGPSDFQSFSESLKSRFNAVSMRYKESISKSTRGWKE 290 H ++ D+AGPS+FQSFSESLKSRFNAVSMRYKESISKSTRGWKE Sbjct: 245 NQHGTSSNNRRSPGQSLPSGQDKAGPSEFQSFSESLKSRFNAVSMRYKESISKSTRGWKE 304 Query: 291 RFFSRYNTTSDLGSEVRREDDAGIERVSGMMERLETRDXXXXX-XXXXXXXXXXXXXXXX 349 R FSR + +D+GS+V+R+ +AGI VS MME LETRD Sbjct: 305 RLFSRNTSMADIGSDVKRKVNAGIATVSRMMEHLETRDNSRTTPSSVSDSSEDTSSPSLG 364 Query: 350 XQQISETAHNNPMNDTNA 367 Q+++ET+ +NP+ DTN Sbjct: 365 DQRMAETSAHNPLGDTNV 382 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs8947 (101 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs24412 (388 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv6236 776 0.0 >Vv6236 Length = 488 Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/388 (97%), Positives = 380/388 (97%) Query: 1 MLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARG 60 MLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARG Sbjct: 101 MLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARG 160 Query: 61 QKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIVFAAMGVNMETAQ 120 QKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK NLLED EDNFAIVFAAMGVNMETAQ Sbjct: 161 QKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKAGNLLEDEVEDNFAIVFAAMGVNMETAQ 220 Query: 121 FFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSS 180 FFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSS Sbjct: 221 FFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSS 280 Query: 181 YADALREVSAAREEVPGRRGYPGYMYTDLAQIYERAGRIEGRKGSITQIPILTMPNDDIT 240 YADALREVSAAREEVPGRRGYPGYMYTDLA IYERAGRIEGRKGSITQIPILTMPNDDIT Sbjct: 281 YADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDIT 340 Query: 241 HPTPDLTGYITEGQIYIDRQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQL 300 HPTPDLTGYITEGQIYIDRQL NRQIYPPINVLPSLSRLMKSAIGEGMTRRDH+DVSNQL Sbjct: 341 HPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQL 400 Query: 301 YANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWT 360 YANYAIGKDVQAMKAVVGEEALSSEDLLY EFLDKFERKFVAQGAYD+RNIFQSLDLAWT Sbjct: 401 YANYAIGKDVQAMKAVVGEEALSSEDLLYPEFLDKFERKFVAQGAYDTRNIFQSLDLAWT 460 Query: 361 LLRIFPRELLHRIPGKTLEQYYSRDAAN 388 LLRIFPRELLHRIP KTL+QYYSRDAAN Sbjct: 461 LLRIFPRELLHRIPAKTLDQYYSRDAAN 488 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs68903 (84 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs194106183 (182 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv63497 269 3e-74 >Vv63497 Length = 180 Score = 269 bits (687), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 123/179 (68%), Positives = 145/179 (81%) Query: 1 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCM 60 MASSM+SS TVAT NR + QA+MVAP TGLKS S FP T+K N DITS+ASNGGRV+CM Sbjct: 1 MASSMLSSATVATINRXTPDQANMVAPSTGLKSLSTFPGTRKANTDITSVASNGGRVRCM 60 Query: 61 KVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGY 120 KVWP G+ KFETLSYLPPL+DE L KE+ YLLR W+PCLEF + +REH+ SPGY Sbjct: 61 KVWPTEGVMKFETLSYLPPLNDEQLCKEVDYLLRMNWVPCLEFTKLYPYPHREHNRSPGY 120 Query: 121 YDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 179 YDGRYWTMWKLPM+GCTD+ QV+KEV E + YP++ +RIIGFDN RQVQCI+F+A KP Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVIKEVQEARTAYPNAHIRIIGFDNTRQVQCIAFIAYKP 179 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs1613 (476 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv25841 229 7e-62 >Vv25841 Length = 161 Score = 229 bits (585), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 110/160 (68%), Positives = 132/160 (82%), Gaps = 3/160 (1%) Query: 89 MRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWHIAMLLLNPCLILIDHGHFQYN 148 MRWTVLSSD L FPA+F F VY++ R++D AW IAM+LLNPCLILIDHGHFQYN Sbjct: 1 MRWTVLSSDILFLFPAVFCFVVVYYTG--RGRRSDIAWLIAMILLNPCLILIDHGHFQYN 58 Query: 149 CISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLGKCLRRKNPIHG 208 CISLGLT+ A+AAILS +EL+A LF+LAL+HKQMS Y+APAFFSHLLGKCLRR+NPI Sbjct: 59 CISLGLTIGAVAAILSDKELVACVLFSLALNHKQMSAYFAPAFFSHLLGKCLRRRNPILE 118 Query: 209 VAKLGLTVLGTFTVVWWPYLHSTDALLGVLSRLAPFERGI 248 V+KLGL V+GTF +VWWPY+HS DA LGV + + F++GI Sbjct: 119 VSKLGLAVVGTFAIVWWPYIHSMDAFLGVNNSI-KFKKGI 157 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41514 (285 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52071 (230 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv15500 377 e-107 >Vv15500 Length = 509 Score = 377 bits (969), Expect = e-107, Method: Compositional matrix adjust. Identities = 182/230 (79%), Positives = 202/230 (87%) Query: 1 MKLVEVEGTHTIQTTYSSLDVHVGQSYSVLVTMDQPPQDFYIAVSTRFTNKVLTSTGTLH 60 M LVEVEGTHT+QTTYSSLDVHVGQSYSVLVT DQP QDFYI VSTRFT++VLT+TG L Sbjct: 201 MVLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPAQDFYIVVSTRFTSQVLTTTGILR 260 Query: 61 YSNSAHXXXXXXXXXXTTQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINISRTIKL 120 YSNSA T QIDWSLNQARSIRTNLTASGPRPNPQGSYHYG+IN SRTI+L Sbjct: 261 YSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGMINTSRTIRL 320 Query: 121 ESSAGQVNGKQRYAVNSVSFIPADTPLKLADYFKIGGVFRVGSIQDQPTGGNIYLDTSVM 180 SSAGQVNGKQRYAVNSVS++P DTPLK+AD+FKIGGVFRVGSI D PTGG +YLDTSVM Sbjct: 321 ASSAGQVNGKQRYAVNSVSYVPGDTPLKVADFFKIGGVFRVGSISDNPTGGGVYLDTSVM 380 Query: 181 GADFRGFIEIVFQNHENIVQSWHIDGYNFWVVGMNGGVWTPASRNEYNLR 230 GADFR F+EIVF+N E+I+QSWHIDGY+F+VVGM+GG+WT SRN+YNLR Sbjct: 381 GADFRAFVEIVFENPEDIIQSWHIDGYSFFVVGMDGGLWTANSRNQYNLR 430 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52926 (231 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41385 (247 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs86377 (261 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82072 (267 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs55139 (99 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs54601 (305 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2566259 118 1e-28 >Vv2566259 Length = 244 Score = 118 bits (296), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/206 (41%), Positives = 104/206 (50%), Gaps = 16/206 (7%) Query: 87 FVHAGGHYIHHHPAGAMPISAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYYVPAGRQ 146 F+HAG HYIHHHP G + + + +Y+VP+ RQ Sbjct: 42 FIHAGTHYIHHHPTGPLQVPSFYPVYPSQQQHHHHHPHQLDPQYP------MYFVPS-RQ 94 Query: 147 PQAYNLSMQQQSHSVSESPTAITSSRXXXXXXXXXXXXXXXXYNPMRNTHITKPEMAAAA 206 QAY+LSMQQ + SE+ T I S R YNP RN + KPEMAA Sbjct: 95 AQAYSLSMQQSN--FSEAATGIPSGRSQAPSAPAMVTSPAA-YNPTRNAPLQKPEMAA-- 149 Query: 207 GVYRTTTTGTXXXXXXXXX-XXXXXXXXXIHHPSQSVAPTSAAMATANYGYEYTDPAHAQ 265 G+YRT T IHHPSQS+AP SAA TANY YE++DPAHAQ Sbjct: 150 GMYRTGTAAAPLVQVPSSQHQQQYVGYSQIHHPSQSIAPPSAA--TANYAYEFSDPAHAQ 207 Query: 266 IYYTQPLAPTMPSQYQTMTEASAQLS 291 I+Y Q +APT+P QYQTMT A S Sbjct: 208 IFYAQAMAPTLP-QYQTMTSADQNFS 232 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82862 (332 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs92249 (171 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4366264 90 2e-20 >Vv4366264 Length = 166 Score = 90.1 bits (222), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 7/87 (8%) Query: 52 DSNKPKRPPTAFFLFMDDFRKEYKEAHPDSKGVTGVAKEAGEKWKNMTDEEKKPYLDKAA 111 D NKPKRPP+AFF+F+++FRK YK+ HP+ K V+ V K GEKWK++++ +K PY KAA Sbjct: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAA 111 Query: 112 ELKADYSKAM-------EGNGDDNEVE 131 + K+DY K M E DD+E E Sbjct: 112 KRKSDYEKLMAAYNKKQESMADDDEEE 138 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs94242 (115 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs9665 (130 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv36823 79 3e-17 >Vv36823 Length = 337 Score = 79.0 bits (193), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/130 (38%), Positives = 77/130 (59%), Gaps = 1/130 (0%) Query: 2 KKPNEKSLVRVLRDGKEHEFSITLRPLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYL-H 60 K + ++V+VLR+ + EF I L + L+ H + PSYYI G VF ++ PYL Sbjct: 159 KYTGDNAVVKVLRNSQILEFCIKLAIHKRLIAAHIKGRPPSYYIIGGFVFTAVSVPYLRS 218 Query: 61 EYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVE 120 EYG+D+ +P +L ++ L + + EQLV+++QVL+ DIN GYE + QV NG Sbjct: 219 EYGKDYEFDAPVKLLDKHLYSMAQSVDEQLVVVAQVLVADINIGYEEIVNTQVLSFNGKP 278 Query: 121 IENLKHLCQL 130 ++NLK L + Sbjct: 279 VKNLKSLATM 288 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs136106187 (131 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv11666263 135 2e-34 >Vv11666263 Length = 121 Score = 135 bits (341), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 66/109 (60%), Positives = 78/109 (71%), Gaps = 3/109 (2%) Query: 1 MLEKLWDDVVAGPQPDRGLGRLRKITTTPLAVKEGGEAESSSGKFQRSLSMXXXXXXXXX 60 +LEKLWDDVVAGPQPDRGLG+LRK+TT PL+VK E S K+QRS+SM Sbjct: 3 LLEKLWDDVVAGPQPDRGLGKLRKLTTKPLSVKTD---EGESSKYQRSMSMPASPGTPAT 59 Query: 61 XXXXXXXXXXRKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYD 109 RKDNVWRSVFHPGSNLAT+G+G++ FDKPT ++PTVYD Sbjct: 60 PMTPTTPTSARKDNVWRSVFHPGSNLATKGMGSDYFDKPTKKDTPTVYD 108 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs191106188 (122 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv11666263 161 3e-42 >Vv11666263 Length = 121 Score = 161 bits (408), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 78/122 (63%), Positives = 91/122 (74%), Gaps = 3/122 (2%) Query: 1 MLEKLWDDVVAGPQPDRGLGRLRKITTTPLAVKEGGEAESSSGKFQRSLSMXXXXXXXXX 60 +LEKLWDDVVAGPQPDRGLG+LRK+TT PL+VK E S K+QRS+SM Sbjct: 3 LLEKLWDDVVAGPQPDRGLGKLRKLTTKPLSVKTD---EGESSKYQRSMSMPASPGTPAT 59 Query: 61 XXXXXXXXXXRKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKH 120 RKDNVWRSVFHPGSNLAT+G+G++ FDKPT ++PTVYDWLYSGETR+KH Sbjct: 60 PMTPTTPTSARKDNVWRSVFHPGSNLATKGMGSDYFDKPTKKDTPTVYDWLYSGETRTKH 119 Query: 121 HH 122 HH Sbjct: 120 HH 121 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs75388 (239 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs62677 (93 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs34689 (264 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv6266260 538 e-155 >Vv6266260 Length = 394 Score = 538 bits (1386), Expect = e-155, Method: Compositional matrix adjust. Identities = 256/264 (96%), Positives = 261/264 (98%) Query: 1 VSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVIS 60 VSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVIS Sbjct: 121 VSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVIS 180 Query: 61 SLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSEITNSAF 120 SLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV+EITNSAF Sbjct: 181 SLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAF 240 Query: 121 EPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAAIKTKRTIQFVDWCPTGFKCGIN 180 EPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA IKTKRTIQFVDWCPTGFKCGIN Sbjct: 241 EPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGIN 300 Query: 181 YQPPSVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDQKFDLMYSKRAFVHWYVGEGMEEG 240 YQPP+VVPGGDLAKVQRAVCMISNSTSVAEVFSRID KFDLMY+KRAFVHWYVGEGMEEG Sbjct: 301 YQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG 360 Query: 241 EFSEAREDLAALEKDYQEAGAESA 264 EFSEAREDLAALEKDY+E GAESA Sbjct: 361 EFSEAREDLAALEKDYEEVGAESA 384 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18122 (107 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs36939 (275 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv13708 67 3e-13 >Vv13708 Length = 168 Score = 67.4 bits (163), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 6/65 (9%) Query: 5 LQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELASA 64 L ALLGNRW+ IA LP RTDN++KNYWN+HLKKK+ ++ + + N+ E AS Sbjct: 35 LHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLKKKLMRMGI------DPNNHRLGERASG 88 Query: 65 SSQQI 69 +S+ Sbjct: 89 TSKSF 93 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs89949 (240 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv49361 367 e-103 >Vv49361 Length = 246 Score = 367 bits (942), Expect = e-103, Method: Compositional matrix adjust. Identities = 183/247 (74%), Positives = 202/247 (81%), Gaps = 9/247 (3%) Query: 1 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTA 60 M L + VGFLS+VSSV G G WINAHATFY YGNLYS+GYGTNTA Sbjct: 1 MTLVGLFLVGFLSMVSSVHGQG-WINAHATFYGGGDASGTMGGACGYGNLYSEGYGTNTA 59 Query: 61 ALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNH 112 ALSTALFNNGLSCG+C++I C ND +WCL GSI++TATNFCPP GGWC+PP H Sbjct: 60 ALSTALFNNGLSCGSCYEIKCVNDGKWCLPGSIVITATNFCPPNNALPNNAGGWCNPPLH 119 Query: 113 HFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVH 172 HFDLSQPVFQHIAQYRAGIVPV YRRV C+R GGIRFTINGHSYFNLVLITNVGGAGDVH Sbjct: 120 HFDLSQPVFQHIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVH 179 Query: 173 AVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQT 232 AV+IKGSRT WQ MSRNWGQNWQSN+YLNGQSLSF VTTS+GH++VSYN P +WSFGQT Sbjct: 180 AVAIKGSRTGWQSMSRNWGQNWQSNTYLNGQSLSFKVTTSDGHTIVSYNCVPAHWSFGQT 239 Query: 233 YTGRQFR 239 ++G QFR Sbjct: 240 FSGAQFR 246 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33140 (153 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv7362 312 2e-87 >Vv7362 Length = 153 Score = 312 bits (799), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 151/153 (98%), Positives = 153/153 (100%) Query: 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60 MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFL Sbjct: 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 60 Query: 61 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD Sbjct: 61 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120 Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 153 DPLSENIAKHWK+NEAEAVETAKEWTRLYASGA Sbjct: 121 DPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 153 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs3081 (161 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv45791 259 1e-71 >Vv45791 Length = 161 Score = 259 bits (663), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 125/161 (77%), Positives = 139/161 (86%) Query: 1 MATAETQTMVVGIDDSEQSTYALQWTLDHFFANSTVNPPFKLVIVHARPSPSAVIGLAGP 60 MAT E MVVG+DDSE S YALQWTLDHFFA PFKLVIVHA+PSP+ IGLAGP Sbjct: 1 MATEEKSVMVVGVDDSEHSFYALQWTLDHFFAPFPGTAPFKLVIVHAKPSPTTAIGLAGP 60 Query: 61 GAVEVLPHVDSDFKKIAARVVEEAKEICSSKSVHDFVVEVVEGDARNILCEAVEKHHASI 120 GA +VLP+V++D KKIA RVV +A EIC+SKSV D ++EVVEGDARN++CEAVEKHHASI Sbjct: 61 GAADVLPYVEADLKKIAGRVVGKAHEICASKSVTDVILEVVEGDARNVMCEAVEKHHASI 120 Query: 121 LVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKRPKTKH 161 LVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVK+PK KH Sbjct: 121 LVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKIKH 161 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6004 (214 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv5906 308 3e-86 >Vv5906 Length = 187 Score = 308 bits (790), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 144/188 (76%), Positives = 165/188 (87%), Gaps = 4/188 (2%) Query: 30 VECNFKPNTSDLPPLPRVGVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHVDVYEQIVGD 89 +ECN P SDLPPLPRVGVEF LE+++D+IK+YG+GPFECYPDRKAAAHV VYEQ VGD Sbjct: 1 MECNVHP-CSDLPPLPRVGVEFQLEKTIDQIKWYGKGPFECYPDRKAAAHVGVYEQNVGD 59 Query: 90 MHVPYIVPGECAARADVRWVTFQNKEGIGIYASMYSSSPPMQLNASYYTTTELDRATHNE 149 MHVPYIVP EC+ RADVRWVTFQNK+G GIYAS+Y SSPPMQ+NASYY+T EL+RATH E Sbjct: 60 MHVPYIVPVECSGRADVRWVTFQNKDGFGIYASVYGSSPPMQMNASYYSTAELERATHKE 119 Query: 150 QLVKEDKIE---VHLDHKHMGLGGDDSWTPCVHDKYLVPAVAYSFSIRLSPLTAATSGYG 206 +L+K D IE VHLDHKHMGLGGDDSW+PCVH+KYL+PAV YSFS RLSP+TAA +GY Sbjct: 120 ELIKGDDIECSQVHLDHKHMGLGGDDSWSPCVHEKYLIPAVPYSFSTRLSPITAAITGYD 179 Query: 207 IYKSQMQN 214 I KSQ+QN Sbjct: 180 ICKSQLQN 187 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs63748 (80 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs22323 (168 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs55995 (204 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv54183 83 4e-18 >Vv54183 Length = 204 Score = 83.2 bits (204), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 80/141 (56%), Gaps = 9/141 (6%) Query: 35 VGLRDEFSLLMYFVLNFFMCLLVNEGLMLVVASIWKDVYWSILTLISIHVVMMLSAGYFR 94 V R EFS ++F LN F C+ V E M+VVAS+ + I+T + +MM+++G+FR Sbjct: 2 VKFRSEFSHYVFFCLNLFSCIAVVESCMMVVASLVPNFLMGIITGAGLIGIMMMTSGFFR 61 Query: 95 IRNALPGPVWTYPISYVAFHTYSIKGLLENEYLGTSFPVGQVRTISGYQALQSAYDISSK 154 + + LP P W YP+SY+++ + ++G +N+ +G F ISG L+ + I++ Sbjct: 62 LLSDLPKPFWRYPVSYISYGAWGLQGAYKNDLIGLEFEP----LISGDPKLKGSEIITNM 117 Query: 155 -----SNSKWGNLLVLVLMAI 170 +SKW +L L ++ I Sbjct: 118 LGIQLDHSKWWDLTALFIILI 138 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs79764 (169 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs23665 (263 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs21714 (286 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv43779 146 5e-37 >Vv43779 Length = 588 Score = 146 bits (368), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 134/258 (51%), Gaps = 15/258 (5%) Query: 2 KVFMPHQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER 61 K+ PH D G+C + QM +L + + GAAGIRPC +FGADQF+ Sbjct: 115 KMHPPHCGTTDT-----GTCIGPTAGQMAFLLSGFGLLVIGAAGIRPCNLAFGADQFNPE 169 Query: 62 SKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 121 ++ K + FFN++Y + T +V+ T++VY+Q + W + M +S L+F+G Sbjct: 170 TESGKRGISSFFNWYYFTYTFAMMVSLTVIVYVQSDVSWSLGLAIPTLLMLLSCALYFMG 229 Query: 122 TPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYE-VPGKHSAIKGSGKIDHT 180 T +Y P GSPL VA V+VAA +KR + L+ +P + K+ HT Sbjct: 230 TRIYVKVKPEGSPLKNVAHVIVAAVKKRRLELPGQPWLSLFNHIPANSI----NSKLPHT 285 Query: 181 DDFRCLDKAALELKEDVIN-----PSPWKLCTVTQVEESKTLVRLVPIPACTIMLNVNLT 235 D FR L K A+ E IN +PW+L ++ +VEE K ++R++PI A I+ V L Sbjct: 286 DQFRFLSKGAILTPEVQINSDGSAANPWRLSSMQKVEEVKCVIRVIPIWAAGIIYYVALV 345 Query: 236 EFLTLSVQQAYTMNTHMG 253 + T V QA + +G Sbjct: 346 QQSTYVVFQALQSDRRLG 363 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs28553 (152 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52884 (196 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs29046 (73 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64340 (248 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs75520 (260 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv18416 109 4e-26 >Vv18416 Length = 340 Score = 109 bits (273), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 53/112 (47%), Positives = 70/112 (62%), Gaps = 6/112 (5%) Query: 8 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALPCGTLPFDDENIPNLFKKIKGGI 67 K++ G+P Y APEV+S K Y G DVWSCGV LY + G PF+D P F+K G I Sbjct: 158 KSAVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRI 217 Query: 68 ----YTLPS--HLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYL 113 Y++P H+S R L+ R+ + +P KRITIPEI+QHPWF + P+ L Sbjct: 218 MSVQYSIPDYVHVSAECRQLLSRIFVANPAKRITIPEIKQHPWFLKNFPKEL 269 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11919 (269 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv26028 494 e-142 >Vv26028 Length = 531 Score = 494 bits (1273), Expect = e-142, Method: Compositional matrix adjust. Identities = 231/269 (85%), Positives = 251/269 (93%) Query: 1 MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 60 +G+ TVIDPAD E L++AL+ NNV+LFFTESPTNPFLRCVD++LVS+LCH+KGA+VCID Sbjct: 263 LGVEVTVIDPADTEALKSALDKNNVTLFFTESPTNPFLRCVDIELVSELCHRKGALVCID 322 Query: 61 GTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSEKLVTQIRNLHHVLGGALN 120 TFATPLNQK LSLGADLVLHSATK+I GHNDV+AG ISGSEKLV+ IRNLHHVLGG LN Sbjct: 323 STFATPLNQKTLSLGADLVLHSATKYIAGHNDVIAGCISGSEKLVSTIRNLHHVLGGVLN 382 Query: 121 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT 180 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVK V+YPGL SHPEHHIA +QMT Sbjct: 383 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKCVYYPGLPSHPEHHIAKRQMT 442 Query: 181 GFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 240 GFGGVVSFEVDGDLT TIKF+DALKIPYIAPSFGGCESIVDQPAIMSYWDL+QSER KYG Sbjct: 443 GFGGVVSFEVDGDLTTTIKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLNQSERAKYG 502 Query: 241 IMDNLVRFSFGVEDFEDLKADVLQALHAI 269 I DNLVRFSFGVEDFEDLKAD+LQAL +I Sbjct: 503 IQDNLVRFSFGVEDFEDLKADILQALESI 531 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs21820 (128 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv44542 102 3e-24 >Vv44542 Length = 97 Score = 102 bits (253), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 44/72 (61%), Positives = 57/72 (79%) Query: 34 SFNCRRGRAYLFSDVVNIMLGPQEERLMLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQK 93 SF+ G+AYLF+ VVNI +G EE++M++GM+TV DIFC CG IVGW+Y AH+K QK Sbjct: 11 SFHTVNGKAYLFNKVVNISVGVHEEKMMMTGMYTVADIFCVGCGSIVGWRYETAHEKAQK 70 Query: 94 YKEGKFVLERWR 105 YKEGK VL+R+R Sbjct: 71 YKEGKSVLQRYR 82 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs105273 (203 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25880 (125 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv27164 89 2e-20 >Vv27164 Length = 381 Score = 89.0 bits (219), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/119 (47%), Positives = 69/119 (57%), Gaps = 15/119 (12%) Query: 7 SSIFTNNGRSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFXX 66 SS++ +N RS G P +L RTLAS++ R+ VV + S+N E Sbjct: 12 SSLWNSNCRSFGTPDTLARTLASSNVFSRRH---KRVV--WCSNNPTCTRE--------- 57 Query: 67 XXXXXXXXXXXPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPL 125 S GYPEYHRLLPCPSQN PPRVEHLVVSEGG VL+YI + L+LPPL Sbjct: 58 -LTASSDSANTSSVNGYPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPL 115 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs81219 (348 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs97065 (199 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs3005 (121 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67006 (189 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs12644 (127 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs5815 (104 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96674 (186 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs99190 (206 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59703 (424 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv56585 374 e-105 >Vv56585 Length = 289 Score = 374 bits (959), Expect = e-105, Method: Compositional matrix adjust. Identities = 192/301 (63%), Positives = 219/301 (72%), Gaps = 16/301 (5%) Query: 1 MANQRLRALLRWTKWA--DWAIAAVGXXXXXXXXXXXXDSSSTDGAASSVNLPASDLVDL 58 MAN RLR LL W K++ DWAIAA G S+ + DLVDL Sbjct: 1 MANPRLRLLLPWRKFSKRDWAIAAFGFTIFFFALSF----------TSTKTIAPLDLVDL 50 Query: 59 TLLHNAKDRGALCLDGSLPGYHFQKGFGSGSNNWLLHIEGGGWCNTIESCSTRKTTALGS 118 TL+ +AKD+GA+CLDGS PGYHF+ GFGSGSNNW+LHIEGGGWCNT+ SC RKTTALGS Sbjct: 51 TLVRHAKDKGAVCLDGSAPGYHFRSGFGSGSNNWVLHIEGGGWCNTVASCLIRKTTALGS 110 Query: 119 SNFMERQVSFSGILSSDPSQNPDFFSWNKVKIHYCDGASFAGRPESEFKNGTNLFFRGQL 178 SN+MERQV FSGILS D SQNPDFF WNKVK+ YCDGASFAG + KN T LFFRGQ Sbjct: 111 SNYMERQVRFSGILSHDSSQNPDFFDWNKVKLRYCDGASFAGNSQ---KNETQLFFRGQR 167 Query: 179 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLD 238 IWEA+MDELLS+G+SNAKQ L+GCSAGGLA +IHCDDFR LP+ ATVKCLADA FFLD Sbjct: 168 IWEAVMDELLSIGLSNAKQVLLSGCSAGGLATLIHCDDFRGILPKDATVKCLADAGFFLD 227 Query: 239 ESDVQGNRTMRSFYDDVFHLQGVAKSLDKNCLSRMGNSSCLFPREFI-KNIRTPVFIVNP 297 E DV GNR +RSFY DV HLQGVA SLDK+C+ RM S +F I + + P F P Sbjct: 228 EKDVTGNRRIRSFYSDVVHLQGVANSLDKDCVGRMEPSQAVFLSSRIYQEHKNPSFPCQP 287 Query: 298 A 298 + Sbjct: 288 S 288 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs68106183 (160 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv25533 144 8e-37 >Vv25533 Length = 159 Score = 144 bits (363), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 89/167 (53%), Positives = 103/167 (61%), Gaps = 15/167 (8%) Query: 1 MEGRKQTGSSSS--LTNELFGSKEXX----XXXXXXXXXXXXXXKVLGRESLHSESMEKK 54 MEG+K+ GSSSS +LFGSKE KVLGRESL + +KK Sbjct: 1 MEGKKRAGSSSSSSFATDLFGSKESSYPSPSSTGIFASIFSTSSKVLGRESLRPDLTKKK 60 Query: 55 HDSSKEAWNTKPTTPVLLLSFPGDASRSYETESQGTAYKDMSSMYQDQRVQPCHLSSSIY 114 DS E WN KP T +A + E ESQ + +D S YQ+QRVQPCHLSSSIY Sbjct: 61 QDSGNEVWNAKPGTTE-------NALQQSEGESQSISNRDTGSFYQEQRVQPCHLSSSIY 113 Query: 115 YGGQDVYSPRPPNSQGPGVNSVFKKD-GEDDSGSASRGNWWQGSLYY 160 YGGQD+Y P NSQ G+ S+ KKD GEDD+GSASRGNWWQGSLYY Sbjct: 114 YGGQDIYF-HPQNSQSSGMPSMLKKDSGEDDTGSASRGNWWQGSLYY 159 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs66047 (145 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59796 (159 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs2196 (83 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs168106181 (156 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67005 (126 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv5751 59 2e-11 >Vv5751 Length = 94 Score = 59.3 bits (142), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 26/49 (53%), Positives = 38/49 (77%) Query: 65 LTLTDGSFAVTDINDNLMFKVKEKLISLHDKRTLLDPAGNPIVTITEKV 113 +T++DG+FAVTD+N +++ KVK L+SL D R LLD AG PIV++ K+ Sbjct: 1 MTISDGNFAVTDVNGSVIIKVKGTLLSLRDHRVLLDAAGKPIVSLQSKM 49 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104791 (155 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv49462 165 4e-43 >Vv49462 Length = 150 Score = 165 bits (417), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 87/146 (59%), Positives = 114/146 (78%), Gaps = 3/146 (2%) Query: 11 LYEKLMLLRDVTNSTSMNKTSIVVDASKYIEELKQQVETLNQEIGTSEASTVEN-SLPV- 68 +++KL LLR +TNS + +KTSI++DASKYIEELKQ+VE LNQE+ ++ S+ E +PV Sbjct: 1 MFKKLELLRSITNSHAHSKTSILLDASKYIEELKQKVERLNQEVAVAQNSSDEQIPMPVQ 60 Query: 69 VTVETLEKGFLINVYLEKNCSGLLVSVLEAFEDLGLEVLDARVSCSDRFQLEAVGG-DHI 127 V VE EKG+LINV E +C GLLV +LEAFE+LGLEVL ARVSCS F LEAVGG ++ Sbjct: 61 VRVEAKEKGYLINVLTESSCPGLLVFILEAFEELGLEVLQARVSCSSSFHLEAVGGKENT 120 Query: 128 EGHADGIDAQVVKEAVLQAIKNVQDS 153 +G + +DAQVVK+AVL+AI+N +S Sbjct: 121 QGQVEHVDAQVVKQAVLRAIENWNES 146 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs21106183 (137 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv31003 90 2e-20 >Vv31003 Length = 427 Score = 89.7 bits (221), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 46/110 (41%), Positives = 72/110 (65%), Gaps = 3/110 (2%) Query: 28 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG-P 86 QG++EF +V TL+S+ HPNL KL+G+ A DQR+L+YE + GSL+ ++ G Sbjct: 148 QGIREFFVEVLTLSSVDHPNLVKLIGYCAE--GDQRLLVYEYMPLGSLENHLHDLPPGTK 205 Query: 87 PIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 136 P+DWN+R+KIA AA+GL +LH++ +Y + +NI + + + KLS Sbjct: 206 PLDWNSRMKIAAGAAKGLEYLHDKMYPPVIYRDLKCSNILLGEGYHPKLS 255 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs40802 (41 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6371 (189 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv49860 299 2e-83 >Vv49860 Length = 188 Score = 299 bits (766), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 144/189 (76%), Positives = 153/189 (80%), Gaps = 1/189 (0%) Query: 1 MTSQSGYVPPPYIPLGQSDSGLEIVPQKEDLSDPRHPSDGPVQWSSGICACFDDMQSCCI 60 M Q YVPPPYIPLGQSDS +EIVP DL RH SD P QWSSGICAC DDMQSCCI Sbjct: 1 MKGQGSYVPPPYIPLGQSDSEVEIVPHDSDLPVHRHTSDSPSQWSSGICACCDDMQSCCI 60 Query: 61 GLFCPWYLFGKNAEFLGSGTFTGSCLTHFITWAFVNTVCCLLTDGILLGLPGCFVSCYAC 120 G FCP +LF KNAEFLGSGT GSC+TH I WA VNTVCCLL+DG LLGLPGCFV+CYAC Sbjct: 61 GFFCPCFLFAKNAEFLGSGTLAGSCMTHLIFWALVNTVCCLLSDGTLLGLPGCFVACYAC 120 Query: 121 GYRRTLRTKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERSSDANPPDLSLAVVTVPPT 180 GYRR LR+KYNL EAPCGDF THFFCHLCAICQEYREIRERS PDL L+VVT PP Sbjct: 121 GYRRALRSKYNLQEAPCGDFTTHFFCHLCAICQEYREIRERSGPET-PDLRLSVVTAPPV 179 Query: 181 QTMESGSKQ 189 QTME+ SK+ Sbjct: 180 QTMETASKE 188 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs53503 (99 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs37497 (285 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv32059 99 8e-23 >Vv32059 Length = 270 Score = 99.0 bits (245), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 6/252 (2%) Query: 14 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 73 L+G AL+TGG +GIG + GA + K+ KD Sbjct: 16 LKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSV-- 73 Query: 74 HCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 132 CDV+ E + T + + GKL+I+ NNA + KP + + EF I++IN Sbjct: 74 -CDVSSRAQREKLMQTISSVFNGKLNILINNAAITIQ-KPTV-EVTAEEFSTIMAINFES 130 Query: 133 AFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFG 192 + ++ A ++K +G GSI+ +SVCGI+ AY+ +K + L KN A E Sbjct: 131 VYHLSQIAHPLLKASGAGSIVFISSVCGIVAHKNISAYSVTKGAMNQLTKNLACEWAEDN 190 Query: 193 IRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVS 252 IR N V+P+ + TP+ L G + V +P++++ +L S ++ Sbjct: 191 IRSNAVAPWYIKTPMVDQMLSNKTFLEGVINRTPLRRVGDPKEVSSVVAFLCLPASSYIT 250 Query: 253 GHNLVVDGGFAI 264 G + VDGG + Sbjct: 251 GQTICVDGGMTV 262 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96109 (106 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104240 (255 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv50868 419 e-119 >Vv50868 Length = 262 Score = 419 bits (1076), Expect = e-119, Method: Compositional matrix adjust. Identities = 200/249 (80%), Positives = 225/249 (90%), Gaps = 2/249 (0%) Query: 1 MGLLSNRIDKESLKPGDHIYSWR-AYVYAHHGIYIGDDKVIHFTRQGQEVGTGTVIDVLL 59 MGLLSNR+DKE+LKPGDHIYSWR AY+Y+HHGIY+G+++VIHFTR GQEVGTGTV+D+LL Sbjct: 1 MGLLSNRVDKENLKPGDHIYSWRTAYIYSHHGIYVGNNEVIHFTRHGQEVGTGTVLDLLL 60 Query: 60 VSSGTTRL-PTPCPTCASNEVGHGVVLSCLNCFLSGGNLYRFEYGVSPALFLGKARGGTC 118 VSSG R PCPTC E GHGVV SCLNCFL+GG LYRFEY VS ALFL KARGGTC Sbjct: 61 VSSGPARRHQVPCPTCTPPEGGHGVVSSCLNCFLAGGILYRFEYSVSSALFLAKARGGTC 120 Query: 119 TLAVADPDDVVIHRAKYLLENGFGCYNVFKNNCEDFAIYCKTGLLVVDQGTMGQSGQAVS 178 TLAV+DP+++V+HRA YLL N FGCYNVFKNNCEDFAIYCKTGLLV+DQGT+G+SGQAVS Sbjct: 121 TLAVSDPNEIVVHRATYLLNNVFGCYNVFKNNCEDFAIYCKTGLLVIDQGTIGRSGQAVS 180 Query: 179 IIGGPLAAVLSTPLRLVTTNVYGMAATAVTVYCASRYAADIGMRRDVVKISAEDLTRRLA 238 IIGGPLAAVLSTPLRLVTTN+YGMAATAV VYCASR+AADIGMR+DV K+ EDLTRRLA Sbjct: 181 IIGGPLAAVLSTPLRLVTTNIYGMAATAVGVYCASRFAADIGMRKDVAKVEVEDLTRRLA 240 Query: 239 TGLLQVLEP 247 TGL+QV+EP Sbjct: 241 TGLIQVIEP 249 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs34540 (258 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs85196 (149 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3410 297 5e-83 >Vv3410 Length = 180 Score = 297 bits (761), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 147/149 (98%), Positives = 147/149 (98%) Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60 Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120 Query: 121 EVDEMXREADVDGDGXINYEEFVKVMMAK 149 EVDEM READVDGDG INYEEFVKVMMAK Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149 Score = 66.2 bits (160), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%) Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59 MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D D Sbjct: 73 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 132 Query: 60 GNGTIDFPEFLNLMARKMKDTDSEEELK 87 G+G I++ EF+ +M K + EE+ K Sbjct: 133 GDGQINYEEFVKVMMAKRRKMRVEEKSK 160 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs113106184 (384 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv19366264 613 e-177 >Vv19366264 Length = 356 Score = 613 bits (1580), Expect = e-177, Method: Compositional matrix adjust. Identities = 299/341 (87%), Positives = 311/341 (91%) Query: 44 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQ 103 T+KIIAEYIWIGGSGMD+RSKARTL GPVSDP KLPKWNYDGSSTGQAPGEDSEVILYPQ Sbjct: 16 TEKIIAEYIWIGGSGMDLRSKARTLSGPVSDPHKLPKWNYDGSSTGQAPGEDSEVILYPQ 75 Query: 104 AIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLL 163 AIFKDPFRRGNNILVMCD YTPAGEPIPTNKRH AAKIFSH +V+AEE WYGIEQEYTLL Sbjct: 76 AIFKDPFRRGNNILVMCDTYTPAGEPIPTNKRHNAAKIFSHPEVLAEETWYGIEQEYTLL 135 Query: 164 QKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMP 223 Q VKWP+ ADKA+GRDIVDSHYKACLYAGINISGINGEVMP Sbjct: 136 QNSVKWPIGWPVGGYPGPQGPYYCGIGADKAFGRDIVDSHYKACLYAGINISGINGEVMP 195 Query: 224 GQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTK 283 GQWEFQVGPAVGISAGD+LWVARYILERITEIAGVV+SFDPKPIQGDWNGAGAH NYSTK Sbjct: 196 GQWEFQVGPAVGISAGDELWVARYILERITEIAGVVVSFDPKPIQGDWNGAGAHTNYSTK 255 Query: 284 SMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASI 343 SMRNDGG+E+IKKAIEKLGLRH EHIAAYGEGNERRLTG+HETADINTF WGVANRGASI Sbjct: 256 SMRNDGGYEIIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGASI 315 Query: 344 RVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 384 RVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAE+TILWKP Sbjct: 316 RVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAESTILWKP 356 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16230 (157 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv26432 275 4e-76 >Vv26432 Length = 342 Score = 275 bits (702), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 130/157 (82%), Positives = 144/157 (91%) Query: 1 MLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKG 60 MLTPNQFEAE LTGFRI +E DGREAC ILHA+GP+KVVITSIN++GNL LIGSHQKEKG Sbjct: 186 MLTPNQFEAELLTGFRIVAEKDGREACNILHASGPSKVVITSINMEGNLLLIGSHQKEKG 245 Query: 61 QSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVND 120 SP+QFKIV+PKIPAYFTGTGDLMTALLLGWSNKY DNL+ AAELAVSSLQALLQRT+ D Sbjct: 246 HSPDQFKIVMPKIPAYFTGTGDLMTALLLGWSNKYPDNLNKAAELAVSSLQALLQRTLAD 305 Query: 121 YVTAGFNPQSSSLEIRLIQSQDDIRNPQVKFKFEKYN 157 YV AGF PQSSSLEIRL+QSQDDIR+P+VK+K E+Y Sbjct: 306 YVKAGFAPQSSSLEIRLVQSQDDIRHPEVKYKAERYT 342 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs71989 (234 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs71992 (208 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs24180 (294 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv59489 201 1e-53 >Vv59489 Length = 375 Score = 201 bits (512), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 115/286 (40%), Positives = 161/286 (56%), Gaps = 13/286 (4%) Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69 IG G YG+V N TNE +A+KKI ++ +REI LL+ + H N++ ++DV Sbjct: 49 IGRGAYGIVCSVLNSETNEMVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIGIRDV 108 Query: 70 V-----HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124 V +Y+ E +D DL + + S + + + FLYQILRG+ Y HS V+ Sbjct: 109 VPPPLRREFSDVYIATELMDTDLHQIIRSNQGLSEEH--CQYFLYQILRGLKYIHSANVI 166 Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTP 184 HRDLKP NLL++ + LK+ DFGLAR T VVT WYRAPE+LL S Y+ Sbjct: 167 HRDLKPSNLLLNANCD-LKICDFGLARPTA-ENEFMTEYVVTRWYRAPELLLNSSDYTAA 224 Query: 185 VDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPD---FKSAF 241 +DVWSVGCIF E++N+RPLF G + ++ + +LGTP E G D + Sbjct: 225 IDVWSVGCIFMELMNRRPLFAGKDHVHQMRLLTELLGTPTESDL-GFVRNDDARRYIMQL 283 Query: 242 PKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 287 P+ P + L V ++ P IDL+ +ML DP++RIT AL H Y Sbjct: 284 PQHPRQPLVNVFPHIHPLAIDLIDRMLTFDPTKRITVEEALAHPYL 329 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7741 (190 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59902 (247 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs74778 (110 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs51243 (112 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78299 (259 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv51307 454 e-130 >Vv51307 Length = 258 Score = 454 bits (1168), Expect = e-130, Method: Compositional matrix adjust. Identities = 215/259 (83%), Positives = 241/259 (93%), Gaps = 1/259 (0%) Query: 1 MALFRMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLY 60 MA+ ++CF S+ +SLF+ AKIPG ++GG WQSAHATFYGGSDASGTMGGACGYGNLY Sbjct: 1 MAVGVVVCFASL-ISLFSLVQAKIPGAYSGGAWQSAHATFYGGSDASGTMGGACGYGNLY 59 Query: 61 SQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPS 120 SQGYGVNTAALSTALFNNGLSCGACFELKC DP WC+ G+P+ILITATNFCPPN+A PS Sbjct: 60 SQGYGVNTAALSTALFNNGLSCGACFELKCANDPTWCHSGSPSILITATNFCPPNYALPS 119 Query: 121 DNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVL 180 DNGGWCNPPRPHFDLAMPMFLK+A+YRAGIVPV++RRVPCRK+GG+RFTINGFRYFNLVL Sbjct: 120 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKQGGMRFTINGFRYFNLVL 179 Query: 181 VTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNSQLVGQALSFRVTGSDRRTSTSWN 240 +TNVAGAGDIVR SVKG+ T W+S+SRNWGQNWQSN+ LVGQ+LSFRVTGSDRRTSTSWN Sbjct: 180 ITNVAGAGDIVRASVKGSKTGWMSLSRNWGQNWQSNAVLVGQSLSFRVTGSDRRTSTSWN 239 Query: 241 VAPANWQFGQTFSGKNFRV 259 +APA+WQFGQTFSGKNFRV Sbjct: 240 IAPAHWQFGQTFSGKNFRV 258 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs95342 (288 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3309 125 1e-30 >Vv3309 Length = 273 Score = 125 bits (313), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 116/234 (49%), Gaps = 56/234 (23%) Query: 61 AKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQS 120 ++ P +L G + GDYG+DPFGL K E Sbjct: 72 SEIPAYLTGEVPGDYGYDPFGLSKKPE--------------------------------- 98 Query: 121 TPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGI--------TWQDAGKVEL 172 +++ ELIH RWAML G + E W G + L Sbjct: 99 ----------DFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-L 147 Query: 173 VEGSS--YLGQPLPFSITTLIWIEVLVIGYIEFQRN-SELDPEKRLYPGGKFFDPLGLAA 229 ++G++ Y G+ +P ++ + EV+++G E+ R + LD E +L+PGG F DPLGLA Sbjct: 148 LDGNTLNYFGKNIPINLIFAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPF-DPLGLAN 206 Query: 230 DPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLHTTIL 283 DP++ A L++ EIK+ RLAM A LGF +QA VTG+GP+ N A HLSDP +L Sbjct: 207 DPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAAHLSDPFGNNLL 260 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs86437 (99 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs83834 (267 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv8462 65 2e-12 >Vv8462 Length = 305 Score = 64.7 bits (156), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 3/58 (5%) Query: 141 DDGHAWRKYGQKVILNARFPRNYFRCTHKFDQGCQASKQVQRIQEEPPLHRTTYYGRH 198 +DG+ WRKYGQK + N+ FPR+Y+RCT + C K+V+R E+P + TTY G+H Sbjct: 162 EDGYRWRKYGQKAVKNSPFPRSYYRCT---NSKCTVKKRVERSSEDPSIVITTYEGQH 216 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs46148 (148 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv41067 304 5e-85 >Vv41067 Length = 148 Score = 304 bits (778), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 145/148 (97%), Positives = 147/148 (99%) Query: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60 Query: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120 Query: 121 PEIAHMYKSDKAKYEATARSWTQKYAMG 148 PEIAHMYK+D+AKYE TARSWTQKYAMG Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs26492 (262 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv65578 100 4e-23 >Vv65578 Length = 265 Score = 99.8 bits (247), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 12/195 (6%) Query: 1 MMFSATMPPWIRSLTNKYLKNPLTVDLVGDSDQKLADGISLYSIATSMYEKPSIIGQLIT 60 ++FSATMP I +L +YL NP+ V VG A+ + + + ++ L+ Sbjct: 24 LLFSATMPMEIETLAQEYLNNPVQVK-VGKVSCPTANVSQILEKVSESEKIDGLLALLVE 82 Query: 61 EYAKGGKC-------IVFTQTKRDADRLAHAM-AKSYNCEPLHGDISQSQRERTLSAFRD 112 E ++ +C IVF + K D + A+ A+ LHG SQ++RE L FR+ Sbjct: 83 EASQAERCGRPFPLTIVFVERKTRCDEVTEALVAQGLRAVALHGGRSQAEREAALRDFRN 142 Query: 113 GRFNILIATDVAARGLDVPNVDLIIHYELPNTSETFVHXXXXXXXXXXXXSAILIYTDQQ 172 G NIL+ATDVA+RGLDV V +I+ +LP E +VH A YTD+ Sbjct: 143 GATNILVATDVASRGLDVTGVAHVINLDLPKAMENYVHRIGRTGRAGSTGQATSFYTDRD 202 Query: 173 ARQVKSIER---DVG 184 V I + DVG Sbjct: 203 VFLVAHIRKAIADVG 217 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs83855 (248 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6443 (77 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18106185 (418 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs73025 (382 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv6166264 751 0.0 >Vv6166264 Length = 381 Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/380 (100%), Positives = 380/380 (100%) Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120 Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180 Query: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240 Query: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300 Query: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL Sbjct: 301 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360 Query: 361 ADYNIQKESTLHLVLRLRGG 380 ADYNIQKESTLHLVLRLRGG Sbjct: 361 ADYNIQKESTLHLVLRLRGG 380 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs74143 (152 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs105224 (167 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69106190 (396 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv10975 583 e-168 >Vv10975 Length = 393 Score = 583 bits (1504), Expect = e-168, Method: Compositional matrix adjust. Identities = 294/397 (74%), Positives = 321/397 (80%), Gaps = 5/397 (1%) Query: 1 MISSVKHTPFS-ASTDFLPKKRFLTPTLKFSPLPIIQNSIFNNKFSSEKPLHISSTQNLT 59 MISS+K + S DFLP+++ +P N S KPL+I S + Sbjct: 1 MISSIKQSTGSFTRCDFLPRRQRCVAKSDVVSVPSSAN--VQGFKCSAKPLYICSVEG-- 56 Query: 60 FSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVF 119 F + + + C AYEA+RS+PLD+NIE+ D++AR EAAQ+LKIGIYFATWWALNVVF Sbjct: 57 FGSRSIGSKSSSVCRAYEAERSQPLDLNIELSDQEARSEAAQKLKIGIYFATWWALNVVF 116 Query: 120 NIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTI 179 NIYNKKVLNAFPYPWLTSTLSLA GSLMML+SWA RIAE PKTDL+FWK+LFPVAVAHTI Sbjct: 117 NIYNKKVLNAFPYPWLTSTLSLATGSLMMLISWAVRIAEPPKTDLDFWKTLFPVAVAHTI 176 Query: 180 GHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAV 239 GHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFL GET P+PVY SLLPIIGGCALAAV Sbjct: 177 GHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYFSLLPIIGGCALAAV 236 Query: 240 TELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPFAIAV 299 TELNFNM GFMGAMISNLAFVFRNIF NYYACLSM+SLLILTPFAIAV Sbjct: 237 TELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVGGMNYYACLSMLSLLILTPFAIAV 296 Query: 300 EGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRX 359 EGPQMWAAGWQKAI+QIGPNF+WWVAAQS+FYHLYNQVSYMSLDQISPLTFSIGNTMKR Sbjct: 297 EGPQMWAAGWQKAISQIGPNFIWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRI 356 Query: 360 XXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAKQ 396 FHTPVQPVNALGAAIAILGTF+YSQAKQ Sbjct: 357 SVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQAKQ 393 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67856 (278 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs30488 (99 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv351 61 5e-12 >Vv351 Length = 286 Score = 60.8 bits (146), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 49/84 (58%) Query: 10 RTRVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKVLKHKMIGQIKREISTMK 69 R + +++G+ LG G F V AR + VA+K+L K ++ + ++ Q++RE+ Sbjct: 17 RWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 76 Query: 70 LIRHPNVIRMYEVMASKTKIYIVF 93 +RHPN++R+Y + ++Y++ Sbjct: 77 HLRHPNILRLYGYFYDQKRVYLIL 100 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs30197 (247 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs72430 (128 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4401 (355 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs117106181 (221 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18129 (217 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs66981 (232 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs30223 (379 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2632 95 2e-21 >Vv2632 Length = 397 Score = 95.1 bits (235), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 21/281 (7%) Query: 39 TFMCPLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLP 98 T + PL+ I+T L V T NI+K +G KGL+RG ++ + P Sbjct: 131 TAVAPLETIRTHLMVGSSGHST---------TEVFNNIMKTDGWKGLFRGNLVNVIRVAP 181 Query: 99 NWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQG 158 + A+ Y+ + L ++ + ++ PL ++KTRL QG Sbjct: 182 SKAIELFAYDTVNKNLSPIPGEQPKIPIPASLVAGACAGVSSTLVTYPLELLKTRLTIQG 241 Query: 159 MRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGV-SHVAIQFPAYERIKHYMAKKD 217 Y + A +I E G LY G+ PSL GV + A + AY+ ++ K Sbjct: 242 DV-----YNGLFDAFVKILQEGGPAELYRGLTPSLIGVVPYAATNYFAYDTLRKTYRKI- 295 Query: 218 DTDVDKLNPGSVMIASSIAKVLASVITYPHEVVRSRLQEQG-QNRKVDVQYAGVVDCVKK 276 +K+ ++ S+A ++S T+P EV R +Q R+V Y V+ + Sbjct: 296 -LKQEKIGNIETLLIGSLAGAISSSATFPLEVARKHMQVGALSGRQV---YKNVLHALSS 351 Query: 277 VFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQSFLLR 317 + ++EG PG Y+G + L+ P+A I+F YE + L+ Sbjct: 352 ILEQEGIPGLYKGLGPSCLKLVPAAGISFMCYEACKRILVE 392 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs98775 (146 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv1285 187 9e-50 >Vv1285 Length = 149 Score = 187 bits (474), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 90/150 (60%), Positives = 119/150 (79%), Gaps = 5/150 (3%) Query: 1 MGV---LDHLFDLFETTPRGKKRKPMQTVDIKVKMDCDGCERKVRNAVSSIRGAKSVEVN 57 MGV L++ DL ++ +GKKRK +QTVD+KV+MDC+GC+ KV+ A+SS++G KSV+VN Sbjct: 1 MGVVATLEYFSDLL-SSKKGKKRKQLQTVDLKVRMDCEGCQLKVKKALSSLKGVKSVDVN 59 Query: 58 RKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVKNV 117 KQ + +VTGY D KVLKK +STGK+AE WPYVPYNLVA+PYVAQ YDKKAP GYV++ Sbjct: 60 LKQQKASVTGYADAKKVLKKAQSTGKKAELWPYVPYNLVAHPYVAQVYDKKAPPGYVRSS 119 Query: 118 VQ-ALPSPNATDERLTTLFSDENPNACSIM 146 A+ + + +E+ TT+FSD+NPNACSIM Sbjct: 120 ENPAITAMSPLEEQYTTMFSDDNPNACSIM 149 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93807 (194 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs21536 (91 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs74366 (159 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv65578 61 9e-12 >Vv65578 Length = 265 Score = 61.2 bits (147), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%) Query: 8 PPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATXX 67 P +V+V + D ++ A+ V G++A+++HG + ER +R F G ++VAT Sbjct: 95 PLTIVFVERKTRCDEVTEAL-VAQGLRAVALHGGRSQAEREAALRDFRNGATNILVATDV 153 Query: 68 XXXXXXXXXXXXXXXFDMPNSIKEYVHQIGRASQMGEEGTAIVFVNEENKNLFQELVDIL 127 D+P +++ YVH+IGR + G G A F + + L + + Sbjct: 154 ASRGLDVTGVAHVINLDLPKAMENYVHRIGRTGRAGSTGQATSFYTDRDVFLVAHIRKAI 213 Query: 128 KSSGAG 133 G+G Sbjct: 214 ADVGSG 219 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs45360 (378 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv33541 316 4e-88 >Vv33541 Length = 252 Score = 316 bits (810), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 148/245 (60%), Positives = 182/245 (74%), Gaps = 4/245 (1%) Query: 137 LSLNQWQSLACMIHSWVPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGT 196 LSLNQWQSL CM+H+ VP+++Y+V R LS+ T EFG+ I L +LVDLV+E G Sbjct: 6 LSLNQWQSLTCMLHAAVPRSRYTVDRQNDLSTFTMPEFGISIYLSHNDFLVDLVKEKVGK 65 Query: 197 VLRLDSIKGGNAWRGMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLT 256 VLRLDSI GGNAW+G DMLIFNTWHWW H G QP+DYI G K Y+DMNRLVAF +GLT Sbjct: 66 VLRLDSIVGGNAWKGFDMLIFNTWHWWIHKGSKQPWDYIEIGGKYYRDMNRLVAFKEGLT 125 Query: 257 TWARWVNFNVDPTKTKVFFQGISPTHYEGRDWNEP-SKSCSGQTKPYFGYKYPAGTPMPW 315 TW++WV N++P T+VFFQGISPTHY G +W + S +C+GQT+P G YP G P Sbjct: 126 TWSKWVESNINPAVTRVFFQGISPTHYNGDEWKQSGSTTCNGQTQPLSGSMYPGGMPSEA 185 Query: 316 VVLQKVFSRLRKPVYLLDITRLSQYRKDAHPSEYGGH---SDDCSHWCLPGLPDTWNQLM 372 +L++V S++ KPV LLDIT LSQ RKD HPS YG + DDCSHWCL G+PDTWN+L+ Sbjct: 186 KILKEVLSKMSKPVQLLDITTLSQLRKDGHPSYYGNNGRKEDDCSHWCLAGVPDTWNELL 245 Query: 373 YAALF 377 YA+L Sbjct: 246 YASLI 250 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs102752 (93 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100171 (92 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs94822 (217 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42616 (265 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv12866259 393 e-111 >Vv12866259 Length = 264 Score = 393 bits (1010), Expect = e-111, Method: Compositional matrix adjust. Identities = 199/268 (74%), Positives = 214/268 (79%), Gaps = 7/268 (2%) Query: 1 MATS--AIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ-SIWYGPDRPKY 57 MA S A+ +FAG T N + GGR++MR+T AP S WYGPDR Y Sbjct: 1 MAASIMALSSPSFAGTTVKLGPN----ASDILGGGRVSMRKTGFKAPSGSPWYGPDRVLY 56 Query: 58 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEI 117 LGP S PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+ Sbjct: 57 LGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116 Query: 118 LSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIX 177 LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQV+LMG VEGYRI Sbjct: 117 LSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIA 176 Query: 178 XXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237 +FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG Sbjct: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236 Query: 238 PIENLYDHIADPVANNAWAYATNFVPGK 265 P+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs75309 (133 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs105081 (119 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67511 (147 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs24696 (218 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs91241 (177 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv10964 218 5e-59 >Vv10964 Length = 166 Score = 218 bits (555), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 100/120 (83%), Positives = 113/120 (94%) Query: 56 TTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDA 115 TTWYKEKRWDS++ML SGGMPSSHSATV+ALAVAIG QEG+G +FAIAVVLAC+VMYDA Sbjct: 47 TTWYKEKRWDSRRMLGSGGMPSSHSATVTALAVAIGFQEGTGGSAFAIAVVLACVVMYDA 106 Query: 116 SGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRN 175 SGVRLHAGRQAELLNQIVCE PPDHP+S+VRPLR+ LGHTPLQVVAG +LGCVVA+LM++ Sbjct: 107 SGVRLHAGRQAELLNQIVCELPPDHPVSNVRPLRDSLGHTPLQVVAGSVLGCVVAYLMKS 166 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs49471 (116 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs76512 (76 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs1214 (105 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs92350 (61 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs76516 (291 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2794 288 1e-79 >Vv2794 Length = 297 Score = 288 bits (736), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 141/291 (48%), Positives = 194/291 (66%), Gaps = 20/291 (6%) Query: 5 SLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSK 62 +L+ S+ V LM S+ F + +W + +G+ L L+LD SG+GF SK++ Sbjct: 14 ALLISVVVSFLMAA--SAGNFYQDFGITWGDGRAKILDNGEFLTLSLDKTSGSGFQSKNE 71 Query: 63 YLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGV 122 YLFGK+ +Q+KLV G+SAGTVTA+Y+SS GP H+E DFEFLGN +G+PY++ TNV+ G Sbjct: 72 YLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNVFSQGK 131 Query: 123 GNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVY 182 GNREQ+ LWFDPT +FHTYS+LWN ++++F VD TPIR N E G+P+PK+Q M +Y Sbjct: 132 GNREQQFYLWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKNSESIGVPYPKNQPMRIY 191 Query: 183 SSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRF 242 SS+WNADDWAT+GG +KTDW+ APF ASY+ F+ DAC A CSS+ Sbjct: 192 SSLWNADDWATRGGLIKTDWTQAPFTASYRNFNADAC------IWFFGASSCSSNTPTSI 245 Query: 243 -----WWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFP-AIPTECV 287 W+ + EL+ ++ WV+ N++IY+YCTDT RFP +P EC Sbjct: 246 SPCTDWYSQ----ELDSTSQERMKWVQKNYMIYNYCTDTKRFPQGLPPECT 292 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11412 (222 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs103596 (61 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs57664 (171 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs68303 (191 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs73743 (111 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs105095 (141 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs94093 (207 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs65078 (201 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs79560 (319 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2866 503 e-144 >Vv2866 Length = 318 Score = 503 bits (1295), Expect = e-144, Method: Compositional matrix adjust. Identities = 239/319 (74%), Positives = 264/319 (82%), Gaps = 1/319 (0%) Query: 1 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKC 60 ME FPVI++E +NG ER A +E I +ACENWGFFELVNHGI E MD VE+LTK HYRKC Sbjct: 1 MEAFPVINMEMLNGEERGATMEMIKDACENWGFFELVNHGISHEQMDAVEKLTKGHYRKC 60 Query: 61 MEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXX 120 MEQRFKELVA++ALEG+QTE+ DMDWESTF++RHLP S +++ PDLDEEYRKVM Sbjct: 61 MEQRFKELVAAKALEGVQTEIKDMDWESTFFLRHLPVSNVSDFPDLDEEYRKVMKDFALK 120 Query: 121 XXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 180 GYLKK FHG+ GP FGTKVSNYPPCPKPDLIKGLRAHTDA Sbjct: 121 LEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA 180 Query: 181 GGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQT 240 GGIILLFQDD VSGLQLLKDGQW+DVPP+RHSIVVNLGDQ+EVITNGKYKSV HRVV+QT Sbjct: 181 GGIILLFQDDTVSGLQLLKDGQWVDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVVAQT 240 Query: 241 DGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPR 300 DG RMS+ASFYNPG+DAVIYPAPALLEKEAE QVYPKFVF+DYMKLY LKFQAKEPR Sbjct: 241 DG-NRMSIASFYNPGNDAVIYPAPALLEKEAENDQVYPKFVFDDYMKLYSGLKFQAKEPR 299 Query: 301 FEAMKAVETNVNLGPIATA 319 FEAMK VE +VN+GPIATA Sbjct: 300 FEAMKNVEASVNMGPIATA 318 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs51828 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs28926 (71 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52976 (206 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv35126 383 e-108 >Vv35126 Length = 206 Score = 383 bits (984), Expect = e-108, Method: Compositional matrix adjust. Identities = 183/206 (88%), Positives = 196/206 (95%) Query: 1 MTLSDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKAL 60 M+ S+EEI RLFRIR+TVMQML+DRGYFVGDFEINM+K QF++KFGENMKREDLVINKA Sbjct: 1 MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60 Query: 61 RNDSSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAK 120 R DSSDQIYVFFP+EQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI EIS K Sbjct: 61 RTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120 Query: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPXCRYYG 180 FHLEVFQEAELLVNIKEHVLVPEHQVLT+EEKKTLL+RYTVKETQLPRIQV+DP Y+G Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIAGYFG 180 Query: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206 LKRGQVVKIIRPSETAGRY+TYRYVV Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs35363 (126 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs77599 (89 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs51219 (212 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs103388 (163 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs130106184 (411 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82372 (151 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs53942 (185 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv42876 211 9e-57 >Vv42876 Length = 172 Score = 211 bits (536), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 99/132 (75%), Positives = 115/132 (87%) Query: 54 KSNKQLNGGVFTVRSSLEIAGATVGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCK 113 ++ ++ V SS++ A A VG+VTEVNKDTFWPIVKAAGDK VVLDMYTQWCGPCK Sbjct: 41 RTQEKRRARVVVRSSSIDTAEAVVGQVTEVNKDTFWPIVKAAGDKAVVLDMYTQWCGPCK 100 Query: 114 VIAPKFQELAKKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKVVKEVTGAKLE 173 V+APKFQEL+ KY DV+FLKLDCNQ+NK+LAKELGIRVVPTFKILKD+K+VKEVTGAKL+ Sbjct: 101 VMAPKFQELSGKYLDVVFLKLDCNQDNKTLAKELGIRVVPTFKILKDSKIVKEVTGAKLD 160 Query: 174 DLVFAIDAVRSS 185 DLV AI+ VRSS Sbjct: 161 DLVVAIETVRSS 172 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs28826 (277 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16106187 (250 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18718 (219 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16002 (168 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96496 (121 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs27266 (81 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv43002 83 1e-18 >Vv43002 Length = 213 Score = 82.8 bits (203), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 38/61 (62%), Positives = 50/61 (81%) Query: 1 MVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPY 60 M+ A+L ESE+KL D+ +E I+DKTF +AD+++DGRI+K EW+ F RNPSLLK MTLPY Sbjct: 132 MLIALLCESEMKLADETIEIILDKTFLEADVNQDGRIDKSEWQNFVSRNPSLLKIMTLPY 191 Query: 61 L 61 L Sbjct: 192 L 192 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs94258 (271 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64199 (180 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv17597 269 2e-74 >Vv17597 Length = 180 Score = 269 bits (688), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 128/180 (71%), Positives = 150/180 (83%) Query: 1 MGWIGESIESVKSMKIRDSLFQFITLGMIVSSALIIWKGLMCITGXXXXXXXXXXXXXXP 60 MGWIGE+++S+KS++IR L Q ++LGMIV+SALIIWK LMCITG P Sbjct: 1 MGWIGETVDSIKSIQIRQVLSQAVSLGMIVTSALIIWKALMCITGSESPVVVVLSGSMEP 60 Query: 61 GFQRGDILFLQMSKDPIRTGEIVVFNIQGRDIPIVHRVIEVHEQRQSGEVRILTKGDNND 120 GF+RGDILFL MSKDPIR GEIVVFN+ GR+IPIVHRVI+VHE++ +GEV +LTKGDNN Sbjct: 61 GFKRGDILFLHMSKDPIRAGEIVVFNVDGREIPIVHRVIKVHERQDTGEVDVLTKGDNNY 120 Query: 121 VDDRMLYAQGQFWLKQEHIMGRAVGFLPYVGWATIIMTEKPIIKYILIGALGLLVITSKD 180 DDR+LYA GQ WL++ HIMGRAVGFLPYVGW TIIMTEKP+IKY+LIGALGLLVITSKD Sbjct: 121 GDDRLLYAHGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPLIKYVLIGALGLLVITSKD 180 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52237 (116 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs87821 (221 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78040 (215 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs87083 (297 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6568 (217 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs89889 (475 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs17598 (108 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv15700 129 1e-32 >Vv15700 Length = 307 Score = 129 bits (325), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 1/109 (0%) Query: 1 MSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALS 60 M HR+H+D SI+LIG LL G E GP +LN VRP G P+VDDW CLKS+V FE+ CG+L+ Sbjct: 199 MQHRVHLDQSIELIGMLLLGPENGPPLLNAVRPRGLPVVDDWECLKSMVVVFETRCGSLT 258 Query: 61 QYGMKHMRSLANICNTGIGKEKMAEASAQACEN-IPSGPWRSLDKGFSA 108 QYGMKHMR+ ANICN GI M EA AC + W +G+SA Sbjct: 259 QYGMKHMRAFANICNNGISLTAMEEACRTACSSHTILDQWSPTIRGYSA 307 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs15890 (150 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv26961 201 4e-54 >Vv26961 Length = 285 Score = 201 bits (512), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 110/152 (72%), Positives = 118/152 (77%), Gaps = 5/152 (3%) Query: 1 MRGQSNGGVRGFASPDRGAHDKRGTRXXXXXXXXXDYNKSGASSETAHDXXXXXXXXXXX 60 M+GQSNG VRGF+SP R D+RG + NKS ASSETAHD Sbjct: 137 MKGQSNG-VRGFSSPARD-QDRRGNHHNANNHHHNNDNKS-ASSETAHDSKKGGGGSSSA 193 Query: 61 --XXXPPVWPPKFVIALTNKEKEEDFMAIKGSKLPQRPKKRAKFIQRTVNLVSPGAWLCD 118 PPVWPPKFVIALTNKEKEEDFMAIKGSKLPQRPKKRAKFIQRT+NLVSPGAWLCD Sbjct: 194 GSEAVPPVWPPKFVIALTNKEKEEDFMAIKGSKLPQRPKKRAKFIQRTLNLVSPGAWLCD 253 Query: 119 LTLERYEVREKKISKKRPRGLKAMGSMDSDSE 150 LTLERYEVREKKISKK+PRGLKAMG+M+SDSE Sbjct: 254 LTLERYEVREKKISKKKPRGLKAMGNMESDSE 285 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78696 (73 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs26081 (399 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64600 (291 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs39988 (142 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104648 (236 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv14766260 425 e-121 >Vv14766260 Length = 236 Score = 425 bits (1092), Expect = e-121, Method: Compositional matrix adjust. Identities = 207/236 (87%), Positives = 221/236 (93%) Query: 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQ 60 MLGVFSS+I+SPP+ELVAAG RTPSPK T+ AL++RF+Q N SAVSV VGD+V LAYTH Sbjct: 1 MLGVFSSSIMSPPDELVAAGCRTPSPKITAEALMNRFIQGNPSAVSVHVGDHVQLAYTHH 60 Query: 61 NESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGLAKSANEVILVIEAYKALRDRAPYP 120 NESPL RSFAVKDEIF LFEGALDNLGSLRQQYGLAKSANEV+LVIEAYKALRDRAPYP Sbjct: 61 NESPLLPRSFAVKDEIFSLFEGALDNLGSLRQQYGLAKSANEVVLVIEAYKALRDRAPYP 120 Query: 121 PNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACG 180 PNHVVGHLSG FAFIV+DKSTSTLFVASDQFGKVPL WGITADG+VAFADDA+LLKGACG Sbjct: 121 PNHVVGHLSGSFAFIVFDKSTSTLFVASDQFGKVPLSWGITADGYVAFADDAELLKGACG 180 Query: 181 KSLASFPQGCFFSTAVGGLRSFENPKNKITAVPAAEEEIWGATFKVEGPAVFAATE 236 KSLASFPQGCFFSTAVG LRSFENPKNKITAVPA +EEIWGATFKVEGPAVFAAT+ Sbjct: 181 KSLASFPQGCFFSTAVGELRSFENPKNKITAVPAPDEEIWGATFKVEGPAVFAATK 236 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs3529 (355 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6779 (150 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs13337 (234 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs3170 (316 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs43708 (321 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4036 62 2e-11 >Vv4036 Length = 296 Score = 61.6 bits (148), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Query: 191 PAVRLNKELGFILTFKLKGEDLIRESGIPYTIVRPCALTEEPAGADLIFDQGDNIT-GKI 249 PA G IL KL+ E IR+SGI YTI+RP L +P +++ + D ++ G I Sbjct: 191 PAYIFLNAFGLILIAKLQAEQYIRKSGINYTIIRPGGLRNDPPTGNIVMEPEDTLSEGTI 250 Query: 250 SREEVARICVAALESPFALDKTFEVKS 276 SR+ VA + V AL P A K E+ S Sbjct: 251 SRDHVAEVAVEALVHPEASYKVVEIVS 277 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69121 (366 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4327 222 1e-59 >Vv4327 Length = 369 Score = 222 bits (565), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 130/343 (37%), Positives = 190/343 (55%), Gaps = 7/343 (2%) Query: 28 APQVPC--YFIFGDSLVDNGNNNQLSSLARANYLPYGIDFP-NGPTGRFSNGKTTVDVIA 84 APQ +F+FGDSLVD+GNN+ L + ARA+ PYGID+P + PTGRFSNG D+I+ Sbjct: 26 APQAHARAFFVFGDSLVDSGNNDYLVTTARADSPPYGIDYPTHRPTGRFSNGLNIPDIIS 85 Query: 85 QLLGFDGYIPPYSAA-RGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQ 143 + +G +P S G+ +L G N+ASA GI +TG Q + I Q++ +Q Q Sbjct: 86 EQIGEQPTLPYLSPELTGERLLVGANFASAGIGILNDTGIQFLNIIRIYKQLEYFQQYQQ 145 Query: 144 QVVNLLGNQDQAANYLSRCIYSIGLGSNDYLNNYFQPLYYSTGRQYTPEQYADLLIQQYT 203 +V L+G Q +++ + I LG ND++NNY+ + + RQ++ Y LI +Y Sbjct: 146 RVTTLIG-AAQTERLVNQALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVRYLISEYR 204 Query: 204 QQLQALYNYGARKFVLIGVGQIGCSPNQLAQNSPDGRTCVKRVNDANVIFNNKLRGLVDQ 263 + L+ LY GAR+ ++ G G +GC P +LA S +G C + A +FN +L +++ Sbjct: 205 KVLRRLYELGARRVLVTGTGPMGCVPAELAMRSRNGE-CAVELQRAADLFNPQLVQMING 263 Query: 264 FNNNDSDAKFIYINAYGIFQDITANPARYGFRVTNTGCCGVGRNNGQITCLPLQNPCPNR 323 NN FI NA+ + D +NP YGF + CCG G NG C N C NR Sbjct: 264 LNNEIGGDVFIAANAFRMHMDFISNPGAYGFVTSKIACCGQGPYNGLGLCTIASNLCANR 323 Query: 324 REYVFWDAFHPTEAANTIIATRSYSAQSPSDAYPIDIRRLAQL 366 Y FWDAFHP+E AN I R + S +P+++ + L Sbjct: 324 DIYAFWDAFHPSERANRYI-VRQILSGSTDYMHPMNLSNIMAL 365 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs84151 (234 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs92660 (206 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs73710 (84 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv15181 132 9e-34 >Vv15181 Length = 239 Score = 132 bits (333), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 59/75 (78%), Positives = 70/75 (93%) Query: 2 LFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALYGYKFDDKKPDSPT 61 LFRPF+G++EIRV+HKEPR +GD+AMVLCFVEF+D C+RTA++AL GYKFDDKKPDSPT Sbjct: 158 LFRPFIGFKEIRVVHKEPRHSGDKAMVLCFVEFNDASCSRTALEALQGYKFDDKKPDSPT 217 Query: 62 LKIQFAHFPFHLPSD 76 L+IQFAHFPF LPSD Sbjct: 218 LRIQFAHFPFRLPSD 232 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs95758 (103 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs103490 (224 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs70246 (301 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4036 459 e-131 >Vv4036 Length = 296 Score = 459 bits (1180), Expect = e-131, Method: Compositional matrix adjust. Identities = 236/305 (77%), Positives = 260/305 (85%), Gaps = 13/305 (4%) Query: 1 MATPLILRNCPTLCTLNSN----QPPLRTLTLTKHFSVSTTKTWSHSINSTKMGKSEITE 56 MA+PL+L TL TL+++ +PPL + FS+ + SHS+ ST+M SEITE Sbjct: 1 MASPLLLFRNTTLSTLHNHYRHHRPPLPAVL----FSIKRRR--SHSLYSTQMEGSEITE 54 Query: 57 EAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQI 116 E E V+VK K IFVAGATG++GKRIVEQLLAKGFAVKAGVRDLDKAKTT NPSLQI Sbjct: 55 EVE--VTVK-KTIFVAGATGNTGKRIVEQLLAKGFAVKAGVRDLDKAKTTFPGGNPSLQI 111 Query: 117 VKADVTEGSAKLSEAIGDDSEAVVCATGFRPGWDLFAPWKVDNFGTVNLVEACRKRGVNR 176 VKADVTEGS KL+EAIGDDS+AV+CATGF+ WDL APWKVDNFGTVNLVEACRK GVNR Sbjct: 112 VKADVTEGSVKLAEAIGDDSDAVICATGFQRSWDLLAPWKVDNFGTVNLVEACRKLGVNR 171 Query: 177 FILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNE 236 FILISSILVNGAAMGQILNPAYIFLN FGL LIAKLQAEQYIRKSGINYTIIRPGGLRN+ Sbjct: 172 FILISSILVNGAAMGQILNPAYIFLNAFGLILIAKLQAEQYIRKSGINYTIIRPGGLRND 231 Query: 237 PPTGNIVMETEDTLYEGTISRDQVAEVAVEALLHPESSYKVVEIISRVDAPKRSYEDLFG 296 PPTGNIVME EDTL EGTISRD VAEVAVEAL+HPE+SYKVVEI+SR DAPKRS++DLF Sbjct: 232 PPTGNIVMEPEDTLSEGTISRDHVAEVAVEALVHPEASYKVVEIVSRTDAPKRSFKDLFA 291 Query: 297 SIKQR 301 SIKQR Sbjct: 292 SIKQR 296 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25743 (150 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs9187 (153 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs143106181 (380 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs65106187 (201 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv51506 147 1e-37 >Vv51506 Length = 263 Score = 147 bits (372), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 74/150 (49%), Positives = 102/150 (68%) Query: 52 IELKNLFRLAAPAILVYMLNNLVAMSTQIFCGHLGNLELAAVSLGNTGIQVFAYGLMLGM 111 +E K L+ LA PAI + + TQ+F GH+G LELAAVS+ N+ I F++G+MLGM Sbjct: 52 VESKKLWYLAGPAIFTSLCQYSLGAITQVFAGHVGTLELAAVSVENSVIAGFSFGVMLGM 111 Query: 112 GSATETLCGQAYGAQKYDMLGVYLQRSAVILTATGIPLMVIYICSKQILLLLGEXXXXXX 171 GSA ETLCGQA+GA + DMLGVY+QRS VILT+T + L +YI S ++L L+G+ Sbjct: 112 GSALETLCGQAFGAGQLDMLGVYMQRSWVILTSTAVLLSFLYIFSARLLKLIGQTEAISK 171 Query: 172 XXXXFVFGLIPQIFAYAVNFPYKRFYRHKA 201 F ++PQ+FAYAVNFP +F + ++ Sbjct: 172 EAGMFAVWMLPQLFAYAVNFPLAKFLQAQS 201 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs53960 (361 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv46391 403 e-114 >Vv46391 Length = 343 Score = 403 bits (1035), Expect = e-114, Method: Compositional matrix adjust. Identities = 182/209 (87%), Positives = 197/209 (94%) Query: 1 MDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHF 60 MD+AL+ FGNDIAIAFSGAEDV LIEYA LTGRPFRVFSLDTGRLNPETY FFD VEKH+ Sbjct: 135 MDKALQNFGNDIAIAFSGAEDVVLIEYARLTGRPFRVFSLDTGRLNPETYAFFDTVEKHY 194 Query: 61 GIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKD 120 GI IEY+FPD+VEVQALVR+KGLFSFYEDGHQECCR+RKVRPLR+ALKGLRAWITGQRKD Sbjct: 195 GIHIEYVFPDSVEVQALVRNKGLFSFYEDGHQECCRIRKVRPLRKALKGLRAWITGQRKD 254 Query: 121 QSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQG 180 QSPGTR+EIPVVQVDP FEG++ GVGSLVKWNPVANV DIWNFLR M+VP+NSLHSQG Sbjct: 255 QSPGTRAEIPVVQVDPTFEGMDSGVGSLVKWNPVANVDSMDIWNFLRAMNVPVNSLHSQG 314 Query: 181 YISIGCEPCTRPVLPGQHEREGRWWWEDA 209 Y+SIGCEPCTRPVLPGQHEREGRWWWED+ Sbjct: 315 YVSIGCEPCTRPVLPGQHEREGRWWWEDS 343 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs77271 (98 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78626 (153 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs61560 (153 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs9739 (198 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs79393 (371 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv9179 631 0.0 >Vv9179 Length = 371 Score = 631 bits (1628), Expect = 0.0, Method: Compositional matrix adjust. Identities = 307/360 (85%), Positives = 330/360 (91%) Query: 6 EITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMT 65 EITNV EYEA+AK+KLPKMV+DYYASGAEDQWTL +NR+AFS+ILFRPRIL DVSKIDMT Sbjct: 2 EITNVTEYEAIAKQKLPKMVFDYYASGAEDQWTLYQNRHAFSQILFRPRILIDVSKIDMT 61 Query: 66 TTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGP 125 TTVLGF ISMPIMIAPTA QKMAHPEGE GTIMTLSSWATSSVEEV+STGP Sbjct: 62 TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGP 121 Query: 126 GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLK 185 GIRFFQLYV K R+V AQLV+RAERAGFKAIALTVDTPRLGRREADIKNRF LPP LTLK Sbjct: 122 GIRFFQLYVYKDRHVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK 181 Query: 186 NYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDASLA 245 N+EGL +GKMDK DDSGLASYVA QIDR+L+WKDVKWLQTIT+LPILVKGVLTAED LA Sbjct: 182 NFEGLDLGKMDKADDSGLASYVAGQIDRTLSWKDVKWLQTITNLPILVKGVLTAEDTRLA 241 Query: 246 IQYGAAGIIVSNHGARQLDYVPATVMALEEVVQAAKGRVPVFLDGGVRRGTDVFKALALG 305 IQ GAAGIIVSNHGARQLDYVPAT+MALEEVV+AA+GRVPVFLDGGVRRGTDVFKALALG Sbjct: 242 IQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALG 301 Query: 306 ASGVFVGRPVPFSLAVDGEAGVRKVLQMLRDEFELTMALSGCRSLKEITRNHIVTHWDTP 365 ASG+F+GRPV FSLA +GEAGVRKVLQMLR+EFELTMALSGCRSLKEITR+HIVT W+ P Sbjct: 302 ASGIFIGRPVVFSLAAEGEAGVRKVLQMLREEFELTMALSGCRSLKEITRDHIVTEWEVP 361 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs98329 (160 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs37247 (111 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs3082 (156 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs65526 (219 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs81867 (293 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs101267 (255 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv32059 98 2e-22 >Vv32059 Length = 270 Score = 97.8 bits (242), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 111/247 (44%), Gaps = 7/247 (2%) Query: 10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69 +G A+VT T+GIG I E L GA++ SRK+ ++E + KA+G V G VC Sbjct: 16 LKGMTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSVCD 75 Query: 70 VSNGQQRKNLINQTIEKF--GKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127 VS+ QR+ L+ QTI GK+ + T E + IN +S Sbjct: 76 VSSRAQREKLM-QTISSVFNGKLNILINNAAITIQKPTVEVTAEE-FSTIMAINFESVYH 133 Query: 128 LLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-RV 184 L Q A P L+ S+V ISS+ G +++ Y V E A D R Sbjct: 134 LSQIAHPLLKASGAGSIVFISSVCGIVAHKNISAYSVTKGAMNQLTKNLACEWAEDNIRS 193 Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGET 244 N VAP ++ T + + SN + + T L R+G +++ YITG+T Sbjct: 194 NAVAPWYIKTPMVDQMLSNKTFLEGVINRTPLRRVGDPKEVSSVVAFLCLPASSYITGQT 253 Query: 245 LVVAGGM 251 + V GGM Sbjct: 254 ICVDGGM 260 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs61017 (73 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41383 (145 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs99051 (533 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs116106187 (282 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs38092 (85 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60654 (178 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs48903 (232 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs31311 (96 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78206 (85 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7724 (276 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv10640 357 e-100 >Vv10640 Length = 282 Score = 357 bits (915), Expect = e-100, Method: Compositional matrix adjust. Identities = 170/260 (65%), Positives = 207/260 (79%), Gaps = 2/260 (0%) Query: 14 KFLNGINDNYGGVVVQMNEPMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLVEPA 73 + L+G ND + GV+V M +PMD ++F + L++SIS WR+Q K+GVWIKLPI LANL+E A Sbjct: 20 ELLSGNNDEHEGVMVNMEKPMDSKVFLTALRASISLWRKQGKRGVWIKLPIGLANLIETA 79 Query: 74 VKEGFWFHHAEPNYLMLVYWIP-GGANTLPANASHRVGVGAFVMNGKREVLVVQENSGRF 132 VKEGF +HHAEP+YLMLV+WI +T+PANA+HRVG+GA VMN +RE+LVVQE SG+ Sbjct: 80 VKEGFHYHHAEPDYLMLVHWISESTTSTIPANATHRVGIGAIVMNDQRELLVVQEKSGKL 139 Query: 133 RGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSDIFFLC 192 +GTGIWK PTGVVD GEDI AAVREVKEET+IDTEFVE+L FRQ+H+SFFEKSD+FFLC Sbjct: 140 KGTGIWKIPTGVVDAGEDIFKAAVREVKEETNIDTEFVEILGFRQTHKSFFEKSDLFFLC 199 Query: 193 MLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAKVDTRGYHGFSP 252 M+RPLSFD+QKQE EI+AA+WMP EEY AQ V+ K I DIC AKVD Y GFSP Sbjct: 200 MMRPLSFDVQKQELEIDAAKWMPFEEYTAQQIVEKPGFYKCITDICLAKVDG-DYIGFSP 258 Query: 253 VPTTSAFSDKKHYFYLNSVD 272 S+F+D+ YFYLN D Sbjct: 259 RLVKSSFTDQLSYFYLNEQD 278 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs5772 (130 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs54979 (258 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv22165 120 3e-29 >Vv22165 Length = 215 Score = 120 bits (300), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 112/194 (57%), Gaps = 5/194 (2%) Query: 20 MNFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYNSMISNGDDCISIGTGCSDVD 79 M+ C + + ++I++ S NTDGIH+ + V I +++I GDD +SIG G ++ Sbjct: 1 MDILNCWNMTLQYVTINATGDSLNTDGIHMGRSTGVNISDAIIKTGDDSLSIGDGSQHIN 60 Query: 80 IADVTCGPSHGISIGSLGAHYSQACVSNITVRNAIIRESDNGLRIKTW-QGGTGCVSDLS 138 + VTCGP HGIS+G LG ++++ V +TV+N + + NG+R+KTW +DL Sbjct: 61 VEKVTCGPGHGISVGRLGKYHNEEPVVGVTVKNCTLINTMNGIRVKTWPDSPVSVATDLH 120 Query: 139 FENIQMENVRNCINIDQYYCLSKECLNQT-SAVFVTGITYRNIKGTYDVRTPPIHFACSD 197 FE+I M NV N I I+Q YC +C + S V ++ ++++ I G + + CS Sbjct: 121 FEDIIMNNVGNPILINQEYCPYDQCQAKVPSQVKISDVSFQGICGMSGTQ---VAVVCSR 177 Query: 198 TVPCTKITMAEVEL 211 VPC + ++++ L Sbjct: 178 GVPCQTVDISDINL 191 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs10524 (80 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv43002 110 4e-27 >Vv43002 Length = 213 Score = 110 bits (275), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 52/79 (65%), Positives = 64/79 (81%) Query: 1 MVVATLTESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQY 60 M++A L ES M L+D+ IE I+DKTF EAD DG+IDK EW+N V R+PSLLK MTL Y Sbjct: 132 MLIALLCESEMKLADETIEIILDKTFLEADVNQDGRIDKSEWQNFVSRNPSLLKIMTLPY 191 Query: 61 LKDITTTFPSFVFHSQVDD 79 L+DITTTFPSFVF+S+VD+ Sbjct: 192 LRDITTTFPSFVFNSEVDE 210 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78173 (405 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv54245 432 e-123 >Vv54245 Length = 270 Score = 432 bits (1112), Expect = e-123, Method: Compositional matrix adjust. Identities = 204/262 (77%), Positives = 232/262 (88%) Query: 140 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKD 199 D IR+VW+DNLE+E LIR ++D Y YIAMDTEFPGVVLR VG FKN N+YN+QTLK Sbjct: 8 DTFHIRDVWDDNLEDEIRLIRGLLDDYPYIAMDTEFPGVVLRSVGNFKNNNEYNFQTLKT 67 Query: 200 NVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELLHQCGID 259 NVD+LKLIQLGLTFSDE+GN PTCGT+++C+WQFNFREFNL +D+FA DS+ELL Q GID Sbjct: 68 NVDLLKLIQLGLTFSDEHGNFPTCGTERYCVWQFNFREFNLNEDVFAHDSIELLKQSGID 127 Query: 260 FKKNNEKGIDVNRFGELLMSSGIVLNDVVRWVTFHSGYDFGYLLKLLTCRSLPDTQAGFF 319 FKKNNEKG+D RF ELLMSSGIVLND V WVTFHSGYDFGYLLKLLT ++LP+TQAGFF Sbjct: 128 FKKNNEKGVDARRFSELLMSSGIVLNDSVHWVTFHSGYDFGYLLKLLTSQNLPETQAGFF 187 Query: 320 ELINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLR 379 ELI +YFP++YDIKHLMKFCNSLHGGLNKLAELL VER+G CHQAGSDSLLT CTF KL+ Sbjct: 188 ELIRIYFPILYDIKHLMKFCNSLHGGLNKLAELLGVERIGSCHQAGSDSLLTCCTFMKLK 247 Query: 380 ENFFNGCTEKYAGVLYGLGVEN 401 ++FFNG EKYAGVLYGLGVE+ Sbjct: 248 KDFFNGSPEKYAGVLYGLGVES 269 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4292 (158 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs92452 (220 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv58683 126 3e-31 >Vv58683 Length = 247 Score = 126 bits (316), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 62/120 (51%), Positives = 82/120 (68%), Gaps = 9/120 (7%) Query: 1 MAGAYGAEADSANRKLFVGGLAWETNSDTLRTYFEQFGDILEAVVITHKNTGRSKGYRFV 60 M+ A G D+ K+FVGGLAWET + +R +FE++G+ILEAV+I+ K TGRSKGY FV Sbjct: 3 MSNAIGQFGDTTLTKVFVGGLAWETPKEAMRDHFEKYGEILEAVIISDKLTGRSKGYGFV 62 Query: 61 TFRDPGSALRACANPSPMIGGRKANCNLAHLGRTRPDLPSFGHP---------RPSSAAP 111 TF++P +A +AC + +PMI GR+ANCNLA LG RP + P RP+SAAP Sbjct: 63 TFKEPEAAKKACEDTTPMINGRRANCNLASLGARRPRSAASSTPPHQGSNGGSRPTSAAP 122 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs68410 (216 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52149 (129 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs61125 (240 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv1787 307 1e-85 >Vv1787 Length = 583 Score = 307 bits (787), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 158/235 (67%), Positives = 185/235 (78%), Gaps = 2/235 (0%) Query: 1 MAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVATSFVAEXXXXXXXXXXX 60 +AQLMETAYIGRLGP+ELASAGVS SIFNI+SK+FNIPLLS++TSFVAE Sbjct: 155 LAQLMETAYIGRLGPVELASAGVSISIFNIISKLFNIPLLSISTSFVAEDISKNAINNSA 214 Query: 61 XXXXCPNVSYNGCD--ESTDRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISS 118 S NG T+R L SVSTAL+LA+ IGI EA A+YFGSG FL++MGI S Sbjct: 215 SEEFYQEESTNGTPFVGVTERMQLSSVSTALLLAVGIGIFEAFALYFGSGWFLNLMGIPS 274 Query: 119 ASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLM 178 ASSM PA+RFLSLRA+GAPAVV+SLA+QGI RGFKDT+TPV CLG+GNF+AVF+FP+LM Sbjct: 275 ASSMHAPARRFLSLRALGAPAVVVSLALQGILRGFKDTKTPVLCLGVGNFAAVFLFPILM 334 Query: 179 YYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGNCL 233 YYF+LGVTGAAISTV SQY+VT LMIW+LNKR +L P M L FGDY++SG L Sbjct: 335 YYFQLGVTGAAISTVVSQYIVTFLMIWHLNKRAVLLPPKMGTLQFGDYIKSGGFL 389 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs62373 (221 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93856 (309 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs94907 (139 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs45674 (235 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv43954 442 e-126 >Vv43954 Length = 279 Score = 442 bits (1137), Expect = e-126, Method: Compositional matrix adjust. Identities = 216/235 (91%), Positives = 227/235 (96%) Query: 1 ATRSTIIVPSSGISWFLDLFNYYVNSDDHELFSKELQLDSKVFYFDIGENRRGRFLKVSE 60 ATRSTIIVP SGISWFLDLFNYYVNSD+ ++FSKELQLD+KVFYFDIGENRRGRFLKVSE Sbjct: 45 ATRSTIIVPFSGISWFLDLFNYYVNSDEQDVFSKELQLDTKVFYFDIGENRRGRFLKVSE 104 Query: 61 ASVSRNRSTIIVPAGSSRDEGWAAFRNILAEINEASRLLILPNQQGSEQSEHLVGLSDDV 120 ASVSRNRSTIIVPAGS+RDEGWAAFRNILAEINEASRL ILPNQQ SE SE LVGLSDDV Sbjct: 105 ASVSRNRSTIIVPAGSTRDEGWAAFRNILAEINEASRLFILPNQQSSEPSERLVGLSDDV 164 Query: 121 GAGFISGHGSQPAPASELNVDRSVDLPAQDEIGNMGVSKVIRADQKRFFFDLGSNNRGHF 180 GAGFISGH +QPAPASELNV+RSV+LPAQDEIGN+GVSKVIRADQKRFFFDLGSNNRGHF Sbjct: 165 GAGFISGHSTQPAPASELNVERSVELPAQDEIGNLGVSKVIRADQKRFFFDLGSNNRGHF 224 Query: 181 LRISEVAGSDRSSIILPLSGLKQFHEIVGHFVEITKDRIEGMTGASVRIVDPPQR 235 LRISEVAGSDRSSIILPLSGLKQFHE+VGHFVEITKDRIEGMTGA+VR VDPPQR Sbjct: 225 LRISEVAGSDRSSIILPLSGLKQFHEMVGHFVEITKDRIEGMTGANVRTVDPPQR 279 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs8154 (173 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7246 (230 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs87569 (180 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv28689 67 3e-13 >Vv28689 Length = 166 Score = 66.6 bits (161), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 74/137 (54%), Gaps = 21/137 (15%) Query: 43 AIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDE 102 A FT FAL G ++G +TGA+ GQ TE+GF RG+ +GA++GA+ ++++ ES + E Sbjct: 7 AAFTCIFALGGAVVGTITGAIKGQTTETGFFRGSGIGAVTGAITALQLLESV----AAGE 62 Query: 103 SGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVEVSFDEAPNIFDTGLSKGL 162 S L ++ SL++G++ E I +E ++ E + ++ +KGL Sbjct: 63 S-----LSKAALLCSLVNGKVFMEWI------------STLETNYGETEDFYNISGAKGL 105 Query: 163 TGESVDKIPKNTITDKN 179 ++K+PK+ N Sbjct: 106 PHNFIEKLPKSNFCPSN 122 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs68601 (229 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv30686 61 2e-11 >Vv30686 Length = 268 Score = 61.2 bits (147), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 13/180 (7%) Query: 4 KHMTTVSQHYFVDESDKSSFSIAIIENMKE-----EYGLFVWPCSVILAEY----VWQQR 54 +H VSQ D S++I ++ G +W V+L ++ V Sbjct: 44 QHNAFVSQSSLSLHLDACGHSLSIFQSPSSLGKPGVTGSVMWDSGVVLGKFLEHAVDSGL 103 Query: 55 YRFSGANVVELGAGTSLPGLVAAKVGSNVTLTDDSNRIEVL-KNMRRVCEMNKL--NCRV 111 G VVELG+G L G +AA +G+ V LTD +R+ +L KN+ + L + V Sbjct: 104 LLLQGKKVVELGSGCGLVGCIAALLGAQVFLTDLPDRLRLLKKNVETNLKQGDLRGSATV 163 Query: 112 MGLTWG-FLDASIFDLNPNIILGADVFYDASAFDDLFATITYLLQSSPGSVFITTYHNRS 170 LTWG + + + P+ +LG+DV Y A DL AT+ L + V N S Sbjct: 164 HELTWGDDPEPELIEPLPDYVLGSDVIYSEGAVADLLATLMQLCGAQTTIVLAGELRNDS 223 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44596 (224 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv29302 362 e-102 >Vv29302 Length = 222 Score = 362 bits (928), Expect = e-102, Method: Compositional matrix adjust. Identities = 171/224 (76%), Positives = 191/224 (85%), Gaps = 2/224 (0%) Query: 1 MVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQET 60 MV WVFGYGSLVWNPGF+YDEK++GFIKDY+RVFDLACIDHRGTP+HPARTCTLE+S+ Sbjct: 1 MVLWVFGYGSLVWNPGFDYDEKVIGFIKDYKRVFDLACIDHRGTPEHPARTCTLEQSEGA 60 Query: 61 ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPD 120 ICWG A+CVRGGPEKERLAMEYLERRECEYD KTLVDFY+EG S PALTG+IVFTSTPD Sbjct: 61 ICWGAAFCVRGGPEKERLAMEYLERRECEYDCKTLVDFYKEGNTSAPALTGIIVFTSTPD 120 Query: 121 KVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRK 180 KVSNKYYLGPAPLE+MARQIATAVGPCGNNRDYLF LEKAMFDIGHEDD +IELA+EVRK Sbjct: 121 KVSNKYYLGPAPLEDMARQIATAVGPCGNNRDYLFLLEKAMFDIGHEDDMVIELASEVRK 180 Query: 181 ELGTAEKGFSRRGKWLGHHPACRSQISYSTLQLGLRPEAVGMDS 224 LG KG + K +G + + S +QL L PE + +DS Sbjct: 181 VLGMVGKGSVKEKKLVGLPHLLPAHM--SAIQLHLLPEVITLDS 222 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs74025 (251 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60125 (152 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25481 (188 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv66220 293 1e-81 >Vv66220 Length = 217 Score = 293 bits (750), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 146/189 (77%), Positives = 157/189 (83%), Gaps = 8/189 (4%) Query: 1 MWAFKKQFAIQLALSSFMSFMLQIGGRSPNKILFAKNTGKIFQTDFHPAYDANGMIEFNE 60 MWAFKKQFAIQLALSSFMSFMLQIGGRSPNKILFAKNTGKIFQTDFHPAYDANGMIEF+E Sbjct: 11 MWAFKKQFAIQLALSSFMSFMLQIGGRSPNKILFAKNTGKIFQTDFHPAYDANGMIEFSE 70 Query: 61 PVPFRLTRNMQSFFSHFGVEGLIXXXXXXXXXXXXXPKQSEHLWYHLGMFFRDELLSWSW 120 PVPFRLTRN+Q+FFSHFGVEGLI PKQS+HLW+ L MFFRDELLSWSW Sbjct: 71 PVPFRLTRNLQAFFSHFGVEGLIVSAMCAAAQAVISPKQSQHLWHQLAMFFRDELLSWSW 130 Query: 121 RRPLGMPLG-AAGGSGLNPIDFKDKVSTNVENVIGRINGIAPQF-SEEEENAQKESVLVE 178 RRPLGMPLG GG LNPIDFK K++ NVE VIGRI+GIAPQ+ SEEEENA V+ Sbjct: 131 RRPLGMPLGPVPGGGSLNPIDFKHKITANVEQVIGRISGIAPQYLSEEEENA------VD 184 Query: 179 PPQSVQKGC 187 PP SVQ+G Sbjct: 185 PPHSVQRGV 193 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs75694 (102 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv36389 67 7e-14 >Vv36389 Length = 542 Score = 67.0 bits (162), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 5/84 (5%) Query: 21 VVEALPCFLFSSASSSQCHGGET---CAICLEDYQDGEKLKVLSCKHEFHASCVDSWLTK 77 VV++ P A ++Q GE C ICL +Y++G+K++VL C HE+H SCVD WL + Sbjct: 456 VVDSFPLKNHKKADTAQS--GEDVAQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKE 513 Query: 78 WGTFCPVCKHDMRNNSESNEVKRG 101 CP+C+ D+R V G Sbjct: 514 IHGVCPLCRGDVREGLTGGSVSNG 537 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs95626 (191 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs162106184 (292 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv23925 63 7e-12 >Vv23925 Length = 183 Score = 62.8 bits (151), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 9/135 (6%) Query: 135 MPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVPTSS-SLLYKEE 193 +P DP +IM+ GTG+APFRGFL + K + + G A LF G +Y++E Sbjct: 27 LPVDPLTPIIMVGPGTGLAPFRGFLQERLALKEDGVQL-GPALLFFGCRNRRMDFIYEDE 85 Query: 194 FEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-L 252 E+ + L A SRE +K Y+Q +M + A+ +W ++ + Y+Y+CG Sbjct: 86 LNNFVEQGILS-ELILAFSREGP----QKEYVQHKMMDRASYIWNIISQGG-YLYVCGDA 139 Query: 253 RGMEKGIDDIMVSLA 267 +GM K + + ++ Sbjct: 140 KGMAKDVHRTLHTIV 154 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs20126 (185 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96763 (192 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv41392 122 3e-30 >Vv41392 Length = 187 Score = 122 bits (307), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 57/75 (76%), Positives = 67/75 (89%) Query: 45 QSKTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFA 104 Q++ SHPPYFQMI EAL+AL +KSGSSPYAIAK+MEEKHK LPANF+KIL++QLK+ Sbjct: 43 QARASSHPPYFQMIKEALLALDEKSGSSPYAIAKHMEEKHKAVLPANFKKILSLQLKNSV 102 Query: 105 AKGNLIKIRASYKLS 119 AKGNLIKI+ASYKLS Sbjct: 103 AKGNLIKIKASYKLS 117 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs46485 (235 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs37583 (233 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv44844 168 6e-44 >Vv44844 Length = 153 Score = 168 bits (426), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 80/131 (61%), Positives = 108/131 (82%), Gaps = 1/131 (0%) Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL-DEEQSVNGFDGLKVD 86 +E HVLAVDD+ +DRK+IE+LL SC+VT ++G RAL++LGL D +Q+ + KV+ Sbjct: 19 DEPHVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKASVSKVN 78 Query: 87 LIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 146 LIITDYCMPGMTGYELLK++K SS L+E+PVVIMSSENI RI++CLE+GA+ F++KP+K Sbjct: 79 LIITDYCMPGMTGYELLKRVKQSSILKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLK 138 Query: 147 LSDVKRIKDYL 157 SDVK+++ YL Sbjct: 139 QSDVKKLRCYL 149 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs251 (198 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs158106188 (191 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs65605 (169 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv23575 95 6e-22 >Vv23575 Length = 210 Score = 95.1 bits (235), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 6/135 (4%) Query: 1 MNNKLASSHVRHDLP-PSSFGKCDLCDREKAFLFCEKGGMCICLTCDMVFHIG----HPR 55 M NKLAS HVR L PS +CD+C+ AF +CE G +CL CDM+ H+G H R Sbjct: 34 MCNKLASRHVRVGLADPSDVPRCDICENAPAFFYCEVDGTSLCLQCDMIVHVGGKRTHGR 93 Query: 56 FLVMRQKIQFPVEDPIWGKPISRPLNQ-AEIKREQNDPLEMTIGEDQQNHKVFPTAVADV 114 +L++RQ+++FP + P + + + E +REQN P MT+ E Q NH + + Sbjct: 94 YLLLRQRVEFPGDKPGRLEELRLQSGEPGEARREQNWPPMMTLRETQPNHMASSVPMLEN 153 Query: 115 RATSKAKRGNKMIDL 129 K NK+IDL Sbjct: 154 NTHGDGKMDNKLIDL 168 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs51257 (81 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs20055 (98 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41080 (169 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11228 (150 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv26170 254 5e-70 >Vv26170 Length = 165 Score = 254 bits (649), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 117/150 (78%), Positives = 127/150 (84%) Query: 1 MSGSSTTTRKKELAEWQVNPPSGFKHKATDNLQRWVIEVNGAPGTLYANETYQLQVEFPE 60 +S + +KEL EWQVNPP+GFKHK TDNLQRWVIEV+GAPGTLYANE+YQLQV+FPE Sbjct: 16 LSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVHGAPGTLYANESYQLQVDFPE 75 Query: 61 HYPMEAPQVIFLHPSPLHPHVYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXXTVKQ 120 HYPMEAPQVIFL P+PLHPH+YSNGHICLDILYDSWSPAMTV TVKQ Sbjct: 76 HYPMEAPQVIFLQPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTVKQ 135 Query: 121 RPEDNDRYVKNCRNGRSPKETRWWFHDDKV 150 RPEDNDRYV+NCRNGRSPKETRWWFHDDKV Sbjct: 136 RPEDNDRYVRNCRNGRSPKETRWWFHDDKV 165 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59303 (175 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv39142 118 6e-29 >Vv39142 Length = 325 Score = 118 bits (296), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 95/162 (58%) Query: 5 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 64 VG+ F G+ QGP I+ +K+ +++ V GAK+ GG+R + +PTV +K Sbjct: 157 VGEGFTEGVVQGPLINEAAVQKVESFVKDAVSKGAKVLLGGKRHSLGMTFYEPTVIGDIK 216 Query: 65 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 124 +DMLIA++E+FGPV +L++K +E I+ +N + GLAA VFT N+ + AL G Sbjct: 217 NDMLIARNEVFGPVAPLLRFKTEEEAIRIANDTAAGLAAYVFTENVQRMWRVTEALEYGL 276 Query: 125 VWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 166 V +N V PFGG K+SG GRE Y + +L++K V Sbjct: 277 VGVNEGLVSTEVAPFGGVKESGLGREGSKYGMDEFLEMKYVC 318 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7897 (156 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs24531 (314 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv19558 256 4e-70 >Vv19558 Length = 341 Score = 256 bits (654), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 123/268 (45%), Positives = 162/268 (60%), Gaps = 3/268 (1%) Query: 46 VSVDQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSS 105 +S DQG++ FG N+ R ++G L LD+ +GSG +S N Y HGFFSA IKLPS ++ Sbjct: 32 ISFDQGYTHLFGEGNLVRSSDGRSVRLLLDRYTGSGFISANLYNHGFFSANIKLPSEYTA 91 Query: 106 GVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDP 165 GVV+AFY SN D + HDE+D E LG+ K W QTN+Y NG S GREE++ WFDP Sbjct: 92 GVVVAFYTSNGDVFEKTHDELDFEFLGNVKGKPWRFQTNVYGNGSTSRGREERYRLWFDP 151 Query: 166 TAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSKPMSVYVTIWDGSQWATHGG 225 + + H YSI+W + +I+F VD VP+RE A YPSKPM++Y TIWD S WAT GG Sbjct: 152 SKEFHRYSILWTAKNIIFYVDEVPIREVIRNEAMGGDYPSKPMALYATIWDASNWATSGG 211 Query: 226 KYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASCSKGSASSLDPVDGQKFTTLSKQQVA 285 KY V+Y YAPFV ++ + GC A A+ + L+ D T L + + Sbjct: 212 KYKVDYNYAPFVSEFSDFVLDGCPADPLQLASAAGCSDKDAELESNDYSAITPLRRISMR 271 Query: 286 ALDWSRRKLMFYSYCKDTTRFKVMPPEC 313 R+K M+YSYC DT R+ PEC Sbjct: 272 KF---RQKYMYYSYCYDTLRYATPLPEC 296 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69506 (247 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs17061 (291 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs28242 (158 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs15423 (160 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs80225 (192 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv27366265 186 3e-49 >Vv27366265 Length = 198 Score = 186 bits (472), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 87/114 (76%), Positives = 103/114 (90%) Query: 78 RMSTGFSDVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSYGGDAWFLGTSV 137 ++ST F DVFAFSGPAPERINGRLAM+GFVAA+G EI KG+DVFAQ+S GG WFLGT+V Sbjct: 84 KVSTKFGDVFAFSGPAPERINGRLAMVGFVAAMGAEIWKGEDVFAQISNGGIPWFLGTAV 143 Query: 138 LLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFDMLDLVALAFTDFVKGGTL 191 +L++ASL+PLFKGVSVESKS+G MTSDAE+WNGRF ML LVALAFT+++KGG L Sbjct: 144 VLSLASLIPLFKGVSVESKSEGLMTSDAEMWNGRFAMLGLVALAFTEYLKGGAL 197 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25001 (97 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52163 (138 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs103577 (58 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs29637 (149 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs30618 (163 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93789 (294 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv9932 275 7e-76 >Vv9932 Length = 171 Score = 275 bits (703), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 133/171 (77%), Positives = 149/171 (87%), Gaps = 1/171 (0%) Query: 124 MRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTE 183 MRWSGV ID+WWRNEQFWVIGGVS+HLFAVFQGLLKVLAGIDT+FTVTSKA D D DF+E Sbjct: 1 MRWSGVRIDDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTDFTVTSKAGD-DEDFSE 59 Query: 184 LYMFKWXXXXXXXXXXXVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFL 243 LY FKW +INL+GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFL Sbjct: 60 LYAFKWTTLLIPPTTLLIINLIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFL 119 Query: 244 KGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 294 KGL+GRQNRTPTI++VWSILLASIFSLLWVRVDPF + GP +E+CG++C Sbjct: 120 KGLLGRQNRTPTIIIVWSILLASIFSLLWVRVDPFLAKSDGPVLEECGLDC 170 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44252 (108 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42555 (159 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs56038 (183 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4613 169 3e-44 >Vv4613 Length = 177 Score = 169 bits (428), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 90/180 (50%), Positives = 108/180 (60%), Gaps = 7/180 (3%) Query: 1 MVSSSFSPLLSANFTVCGNPNNLHAIIPSGCNNKHTHFXXXXXXXXXXXXFQRVIHKAVV 60 MVSS SPL ++ + +P + K T Q+ I Sbjct: 1 MVSSLLSPL--SDTVLHSSPPKITVSEKPTIPQKKTQLGFTKKPSWTSPLLQKSI----- 53 Query: 61 PLAASVTVLLSPVPAKAGFLSGFSGIESVPGPELPQIEFLNRFNEENQKKYAEFDARFXX 120 PLAASV +LL PA AGFLSGFSGIESVPGPELPQ++FLN+FNEENQKKYAEFD RF Sbjct: 54 PLAASVAILLWSNPANAGFLSGFSGIESVPGPELPQVDFLNKFNEENQKKYAEFDERFKS 113 Query: 121 XXXXXXXXXXXXXXXXXXRQEIENKYCLRGAEWGVGDCSAEGMSPEERENFISMLKQKAG 180 R+EI++KYC+RGAEWGVGDCS EGMSP +++NFI+ LKQK G Sbjct: 114 SPLLKELLERSKLNQEKNRKEIQDKYCIRGAEWGVGDCSVEGMSPADKDNFIATLKQKLG 173 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs173106183 (286 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv13242 241 1e-65 >Vv13242 Length = 216 Score = 241 bits (615), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 116/172 (67%), Positives = 136/172 (79%), Gaps = 9/172 (5%) Query: 8 ELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYF 67 +LPPGFRF+PTDEEL+VHYL+ +A+S P PV+II EVD+YKFDPW+LP KA FGE+EWYF Sbjct: 14 QLPPGFRFYPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYF 73 Query: 68 FSPRDRKYPNGTRPNRATVSGYWKATGTDKAIY--GGSKYLGVKKALVFYKGRPPKGIKT 125 FSPRDRKYPNG RPNRA SGYWKATGTDK + GG++ +GVKKALVFY G+PPKGIKT Sbjct: 74 FSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPKGIKT 133 Query: 126 DWIMHEYRLND---PTRQPYKHNG----SMKLDDWVLCRIYKKRQTGSRSVL 170 +WIMHEYRL D T+ P G S++LDDWVLCRIY K R +L Sbjct: 134 NWIMHEYRLADNKVNTKPPGCDMGNKKNSLRLDDWVLCRIYXKNTRIERWIL 185 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs37739 (121 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv31003 203 9e-55 >Vv31003 Length = 427 Score = 203 bits (516), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 97/117 (82%), Positives = 104/117 (88%) Query: 1 MKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS 60 MKIAAGAAKGLEYLHDK PPVIYRD K SNILL EG+HPKLSDFGLAK+GP GDK+HVS Sbjct: 213 MKIAAGAAKGLEYLHDKMYPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPTGDKTHVS 272 Query: 61 TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSSRPHGEQNLVTW 117 TRVMGTYGYCAP+YAMTGQLT KSD+YSF VV LELITGRKAID+S+ EQNLV W Sbjct: 273 TRVMGTYGYCAPDYAMTGQLTFKSDIYSFRVVLLELITGRKAIDNSKGAREQNLVAW 329 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100626 (110 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4708 59 2e-11 >Vv4708 Length = 471 Score = 59.3 bits (142), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 25/42 (59%), Positives = 32/42 (76%) Query: 1 MRPNCDLNIYVFALFNENLKPGPTSERNYGLFKPDGSPAYSL 42 +RP DL +++FALFNEN KPGP+SERNYGLF P Y++ Sbjct: 300 LRPKADLVVFLFALFNENKKPGPSSERNYGLFYPSEEKVYNI 341 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78025 (183 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv12139 283 1e-78 >Vv12139 Length = 355 Score = 283 bits (725), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 150/183 (81%), Positives = 166/183 (90%) Query: 1 MMRHKMNQPGKSVGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVV 60 MMRHKMNQPGKS+GVIGLGGLGH+AVKFGKAFGL VTV STS SKKEEAL+LLGADKFVV Sbjct: 173 MMRHKMNQPGKSLGVIGLGGLGHLAVKFGKAFGLRVTVFSTSISKKEEALNLLGADKFVV 232 Query: 61 SSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPASLNIGA 120 SSD +QM AL +SLDFIIDTASGDHPFD Y+SLLK AGV VLVGFPSEVKFSP S+ +G Sbjct: 233 SSDEQQMMALSRSLDFIIDTASGDHPFDPYLSLLKTAGVLVLVGFPSEVKFSPGSIVMGM 292 Query: 121 KTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQN 180 +TVSGS TGGTKDTQEML++CAAH I+P+IE IPI+ NEALERLIK+DVKYRFVIDI+N Sbjct: 293 RTVSGSATGGTKDTQEMLDFCAAHGIHPEIEVIPIQYANEALERLIKKDVKYRFVIDIEN 352 Query: 181 SLK 183 SLK Sbjct: 353 SLK 355 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7740 (77 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16453 (223 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv42304 137 1e-34 >Vv42304 Length = 364 Score = 137 bits (346), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 88/228 (38%), Positives = 130/228 (57%), Gaps = 25/228 (10%) Query: 1 TRPKENDSQTQQS---SFGNTPGLRSVLTFEGKIVYEEIISATNDFNAEHCIGKGGHGSV 57 TRP ++ S T S S P L+ +I E+++AT +F ++ IG G G V Sbjct: 42 TRPIQSSSLTSISVGESATFDPSLK-------RISMGELLAATRNFASDGIIGDGSFGMV 94 Query: 58 YRAKVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQALTEIRHRNIVKFYCFCSHPKHS 116 Y+A + +G AVKK SP +FQ EF E + L +++HRNIV+ +C Sbjct: 95 YKACLSNGVTVAVKKL-SP----DAFQGFREFRAETETLAKLQHRNIVQILGYCVSGSDR 149 Query: 117 FIIYEYLESGSLDKILCNDASAKELG-------WTQRLNVIKGVADALFYLHNNCFPPIV 169 +IYE++E GSLD+ L + + ++L W RL +I+GVAD L YLHN PI+ Sbjct: 150 VLIYEFIEKGSLDQWLHDTSEDQQLSTPRLPLSWETRLKIIRGVADGLSYLHN-LDTPII 208 Query: 170 HRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS-ELAGTHGYVAP 216 HRDI + NVLLD +E H++DFG+A+ + S+ S ++AGT GY+ P Sbjct: 209 HRDIKASNVLLDSEFEPHIADFGLARRIEWSHSHVSTQVAGTMGYMPP 256 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs61627 (175 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs84487 (72 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv62388 86 1e-19 >Vv62388 Length = 185 Score = 85.9 bits (211), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/103 (50%), Positives = 56/103 (54%), Gaps = 44/103 (42%) Query: 10 NVKAKIQDKEGIPPDQQRLI---------------------------------------- 29 NVKAKIQDKEGIPPDQQRLI Sbjct: 25 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL 84 Query: 30 ----TTLEVKSSDTINNVKSKIQDKEGIPPDQQRLIFAGINLK 68 TLEV+SSDTI+NVK+KIQDKEGIPPDQQRLIFAG L+ Sbjct: 85 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 127 Score = 67.8 bits (164), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 32/38 (84%), Positives = 36/38 (94%) Query: 31 TLEVKSSDTINNVKSKIQDKEGIPPDQQRLIFAGINLK 68 TLEV+SSDTI+NVK+KIQDKEGIPPDQQRLIFAG L+ Sbjct: 14 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 51 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs57743 (134 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64036 (129 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv47102 109 2e-26 >Vv47102 Length = 411 Score = 109 bits (273), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 52/84 (61%), Positives = 62/84 (73%) Query: 13 QGSRGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKLPVGKRCGFVQFAKRTCA 72 QGS+ D NTTIFVGGLD VTD+ L+ F Q+GE+V VK+PVGK CGFVQFA R A Sbjct: 279 QGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSA 338 Query: 73 EQALSVLNGTQLGGQSIRQSWGRS 96 E AL LNGT +G Q++R SWGR+ Sbjct: 339 EDALQRLNGTVIGKQTVRLSWGRN 362 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52033 (164 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7158 (61 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs85456 (321 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44225 (185 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs36587 (202 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2810 306 2e-85 >Vv2810 Length = 235 Score = 306 bits (785), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 149/203 (73%), Positives = 172/203 (84%), Gaps = 1/203 (0%) Query: 1 MALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVFEGGNSLEDLSNTVSDACICLQEN 60 +A PFPIEKAPT+KI + G+GVKI ELL YPVRGLVFEGG++L+DL+NTV+D+CICLQ+N Sbjct: 33 LATPFPIEKAPTRKITTAGNGVKIFELLKYPVRGLVFEGGDTLQDLANTVADSCICLQDN 92 Query: 61 NIPYNVLIADCGKRIFLLPQCYAEKQALGEVSSELLDTQVNPAVWEISGHMVLKRKKDYE 120 NIP+NVLIAD GKRIFL QCYAEKQALGEV+ ELLDTQVNPAVWE+SGH+VLKRK+DYE Sbjct: 93 NIPFNVLIADAGKRIFLFAQCYAEKQALGEVNQELLDTQVNPAVWEVSGHIVLKRKEDYE 152 Query: 121 EASEENAWRLLAEVSLSEERYQEVNALIFEAIARGDDANGGVAESVIGEADAKPKSGGEV 180 ASE+NAWRLLAEVSLSEER+QEVNALIFEAIA GDD G + E +I E D P S + Sbjct: 153 GASEQNAWRLLAEVSLSEERFQEVNALIFEAIACGDDEKGNLTEDMIEEPDVTPPSHEDA 212 Query: 181 DAINKNSCP-AMVSGTPECLVLQ 202 AIN +S P AMV+G ECLV Q Sbjct: 213 GAINNSSYPAAMVAGKQECLVQQ 235 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs9986 (197 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv4708 223 2e-60 >Vv4708 Length = 471 Score = 223 bits (567), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 111/179 (62%), Positives = 134/179 (74%), Gaps = 2/179 (1%) Query: 4 ADTGKVGINYGRVANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFP 63 AD G +G+NYGR+ANNLPS KVV+LLKSQGI RVK +DTD AVL AL S I V V P Sbjct: 19 ADAGSIGVNYGRIANNLPSAVKVVQLLKSQGIERVKVFDTDPAVLKALGESGIKVTVDLP 78 Query: 64 NEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYN 123 NE L AA QSF + WVQ N++ Y+PATKIEA+AVGNEVF DP NTT LVPA+KN++ Sbjct: 79 NELLISAAKRQSFANTWVQKNVADYFPATKIEAIAVGNEVFVDPHNTTLSLVPALKNIHK 138 Query: 124 SLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALNPCWSFYVRRRRISWLM 182 +LVKY L S++KVSSP+AL ALQ+SYP S+GSF+ +LIEP P F R+ S+LM Sbjct: 139 ALVKYNLHSHIKVSSPVALSALQSSYPSSAGSFRQELIEPVFKPMLEFL--RQTGSYLM 195 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs68717 (261 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs71761 (366 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs76394 (198 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs58089 (285 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104403 (67 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42867 (334 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs26683 (118 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv61002 144 4e-37 >Vv61002 Length = 100 Score = 144 bits (364), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 78/120 (65%), Positives = 81/120 (67%), Gaps = 22/120 (18%) Query: 1 MATLDSDVPMIPVGEXXXXXXXXXXX--XXXXRFEIKKWSAVALWAWDIVVDNCAICRNH 58 MA+LDSDV M+PVGE RFEIKKW+AVALWAWDIVVDNCAICRNH Sbjct: 1 MASLDSDVTMVPVGEPSGSAGPSSSSSCKKPKRFEIKKWNAVALWAWDIVVDNCAICRNH 60 Query: 59 IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118 IMDL VCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH Sbjct: 61 IMDL--------------------WVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 100 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60255 (235 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv60148 325 5e-91 >Vv60148 Length = 613 Score = 325 bits (832), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 156/259 (60%), Positives = 187/259 (72%), Gaps = 24/259 (9%) Query: 1 MQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPG 60 MQPDWDMFHSLHP AEYHGAARAVGGCAIYVSDKPG H+F LLRKLVLPDGS+LRA+LPG Sbjct: 316 MQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGHHNFELLRKLVLPDGSVLRAQLPG 375 Query: 61 RPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTG 120 RPTRDCLF+DPARDG SLLKIWN+N +GVVGVFNCQGAGWC++ KK +HD P T TG Sbjct: 376 RPTRDCLFADPARDGTSLLKIWNVNKCSGVVGVFNCQGAGWCKIEKKTRVHDTSPDTLTG 435 Query: 121 FIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKE 180 + A DVD + VAG W GD + Y++ GEV LP+ A+LP+TLK E+EV+ P+KE Sbjct: 436 SVCAADVDQIAHVAGTNWKGDVVVYAYKSGEVVRLPEGASLPVTLKVLEFEVFHFCPLKE 495 Query: 181 LSSGTRFAPIGLVKMFNSGGAIK----------------EVRYE-----SEG---TATVD 216 +++ FAPIGL+ M NSGGA++ E+ +E SE TAT+ Sbjct: 496 IATNISFAPIGLLDMLNSGGAVEQFEVHMACEKPELFDGEIPFELSTSLSENRSPTATIA 555 Query: 217 MKVRGCGELGAYSSARPQR 235 + RGCG GAYSS RP + Sbjct: 556 LTARGCGRFGAYSSQRPLK 574 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs169106190 (361 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3451 147 3e-37 >Vv3451 Length = 283 Score = 147 bits (371), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 95/222 (42%), Positives = 117/222 (52%), Gaps = 12/222 (5%) Query: 62 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRH 121 F+ F RR+GK Y S EE RF F NL R S G+ +F+D + EF+ Sbjct: 65 FSIFKRRFGKSYASQEEHDYRFKVFKANLRRARRHQQLDPSATHGVTQFSDLTPAEFRGT 124 Query: 122 RLGAAQ-NCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAA 180 LG + L + LPE DWR+ G V+ VK+QG CGSCW+FSTTG+LE A Sbjct: 125 YLGLRPLKLPHDAQKAPILPTNDLPEDFDWRDHGAVTAVKNQGSCGSCWSFSTTGALEGA 184 Query: 181 YHQAFGKGISLSEQQLVDCAQAFN-------NQGCNGGLPSQAFEYIKYNGGLDTEEAYP 233 A G +SLSEQQLV+C + + GCNGGL + AFEY GGL EE YP Sbjct: 185 NFLATGNLVSLSEQQLVECDHECDPEEMGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYP 244 Query: 234 YTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 274 YTG D G CKF + V I+L DE Q A LV+ Sbjct: 245 YTGTDRGSCKFDKTKIAASVSHFQCISL---DEDQIAXYLVK 283 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs76629 (283 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv20929 258 1e-70 >Vv20929 Length = 268 Score = 258 bits (658), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 148/281 (52%), Positives = 180/281 (64%), Gaps = 48/281 (17%) Query: 12 PEKSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATT-MNLFPVSDN 70 PEKSSFSQTCSLLSQY+KE G+FGDLSLG++ ++E NG PE R+ A TT MNLFP+++ Sbjct: 23 PEKSSFSQTCSLLSQYIKEKGTFGDLSLGMTCSLEGNGTPESLRQTATTTTMNLFPMTER 82 Query: 71 SG--QDVSVRNMVAPRNWESMNLFPQQAGFAP---KNDTPNMIDSSLNKPA---PQTAQM 122 S + RNM N +SMNLFPQQAGF K+D P +++SS+ K PQTAQM Sbjct: 83 SAGVSGIPARNM----NLKSMNLFPQQAGFGSSVSKDDAPKIVNSSVKKSGNVEPQTAQM 138 Query: 123 TIFYGGQVIAFNDFPADKANEIMQLASNGSSLSHGTAYPPMQLPAQGYNSFAASLPKSPV 182 TIFYGGQVI FNDFPADKA E+M+LA GSS PV Sbjct: 139 TIFYGGQVIVFNDFPADKAKEVMRLAGMGSS---------------------------PV 171 Query: 183 ESTPPVSPGPPKILTEPSCSVPPRSNSIPNFGNNLIPECAQPPSRP--CDLPIARRNSLH 240 ST +P + P N +PNF N+LI E Q P++P C+LPIAR+ SLH Sbjct: 172 PSTTVKNP------IDAGGMAPSTPNVVPNFANSLIQERIQRPAQPVACELPIARKASLH 225 Query: 241 RFLEKRKDRIVARAPYQVNGSAGAPDKPADSKSWLGLAAQT 281 RFLEKRKDRI ARAPY ++ S P KPA+SKSWLGLAA++ Sbjct: 226 RFLEKRKDRITARAPYNISNSPAGPHKPAESKSWLGLAAKS 266 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96407 (215 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33540 (185 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv27480 92 5e-21 >Vv27480 Length = 93 Score = 92.4 bits (228), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 42/89 (47%), Positives = 61/89 (68%) Query: 21 MVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTVTYQKYTLNIWDVGGQRTIRSYWRNY 80 MVGLD +GKTTI+ K+ + PT+GFN++TV Y+ + +WDVGGQ IR WR+Y Sbjct: 1 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHY 60 Query: 81 FEQTDGLVWVVDSSDLRRLDDCKMELDNL 109 F+ T GL++VVDS+D R+ + + EL + Sbjct: 61 FQNTQGLIFVVDSNDRDRVVEARDELHKI 89 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44383 (175 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv7783 260 8e-72 >Vv7783 Length = 177 Score = 260 bits (665), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 131/174 (75%), Positives = 141/174 (81%), Gaps = 1/174 (0%) Query: 1 MAEGDEDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKN 60 MAEGDEDLPRDAKIVKSLLKSMGV+DYEPRVIHQFLELWYRYVVDVLTDAQVYSEHA K Sbjct: 1 MAEGDEDLPRDAKIVKSLLKSMGVDDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKP 60 Query: 61 TIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLIS 120 IDCDDVKLA+Q KVN SF QPPAREVLLELA+NRNKIPLPKSIAG GIPLPPEQDTLIS Sbjct: 61 AIDCDDVKLAIQFKVNFSFFQPPAREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLIS 120 Query: 121 PNYQLSIXXXXXXXXXXXXXXXXXXXXP-NASEEQRTDMLQQTPQKVSFPLARR 173 PNYQL+I P +AS+E RTD+ Q TPQ+VSFP+ + Sbjct: 121 PNYQLAIPKKRTAQAVEETEEDEEGADPSHASQEGRTDLPQHTPQRVSFPIGAK 174 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93067 (208 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs62790 (99 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs81803 (150 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs94224 (208 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv15994 63 3e-12 >Vv15994 Length = 269 Score = 63.2 bits (152), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 16/136 (11%) Query: 49 NTRYFIIKSLNHQNIQLSIEKEIWATQVMNEPILEEAFHNSG----------KVILIFSV 98 N ++++IKS + +I I+ ++WA+ L+ AFH++ + L FSV Sbjct: 12 NAKFYVIKSFSEDDIHKCIKYDVWASTPNGNKKLDAAFHDAEAKANETGTKFPIFLFFSV 71 Query: 99 NMSGFFQGYAQMMSSVGWRRD-NVWSQGNGKNNPWGRSFKVKWLRLNTLPFQKTLHLKKS 157 N SG F G A+M+ V + +D + W + W F VKW + +P + H+ Sbjct: 72 NGSGQFVGVAEMVGQVDFNKDMDFWQL-----DKWNGFFPVKWHIVKDIPNSQLRHITLE 126 Query: 158 IDDYKPVKISRDCQEL 173 ++ + V +RD QE+ Sbjct: 127 SNENRSVTYTRDTQEI 142 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11942 (289 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs47924 (209 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs43967 (202 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs2793 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs22577 (308 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41106181 (389 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs10231 (254 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs80871 (324 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv19510 329 4e-92 >Vv19510 Length = 257 Score = 329 bits (844), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 164/256 (64%), Positives = 193/256 (75%), Gaps = 11/256 (4%) Query: 1 MMVVLDEEELLGCCGSTKFAKEMASASPFASLNQAVSAARHIWFNLVDVNGWLDAFSAHP 60 M ++E++ L CCGS KFA+EM S+ PFA+L+QA+ AAR IWFN VDVNGWL+AF+AHP Sbjct: 1 MDSKMEEKDFLACCGSKKFAEEMTSSGPFANLDQAIDAARDIWFNKVDVNGWLEAFAAHP 60 Query: 61 QIGQSPSS--------QWSKAEQSTALATANESSSQELSDWNNRYRLRFGFIFIICASGR 112 QIGQ+PS+ QWSK EQSTAL TA +SS QELSDWN RY +FGF+F+ICASGR Sbjct: 61 QIGQNPSAKHPSDTSAQWSKGEQSTALQTATDSSLQELSDWNARYWKKFGFVFLICASGR 120 Query: 113 TAAEILAELKKRYTNRPIIEFEIAAQEQMKITEXXXXXXXXXXXXXXXXTFQYSATA--K 170 TA+EILAELK+RY NRPI+EFEIAAQEQMK+TE + Q TA K Sbjct: 121 TASEILAELKRRYPNRPIVEFEIAAQEQMKVTELRLAKLFSTQVKAASISTQNPETAAKK 180 Query: 171 TAEDRVSIIEGHLCASTEASAGKISQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKG 230 EDRVSII HL A++EASAGK QI RTR PITTHVLDV++GSPAAG+EVRLEMWKG Sbjct: 181 AGEDRVSIIGAHLTATSEASAGKTPQISPRTRPPITTHVLDVARGSPAAGIEVRLEMWKG 240 Query: 231 IQPRPLFGETDVSGWV 246 QPRPLFG+ D GW+ Sbjct: 241 NQPRPLFGKED-EGWL 255 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64416 (97 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs68418 (177 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv7645 60 3e-11 >Vv7645 Length = 492 Score = 59.7 bits (143), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Query: 95 VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSI 154 V+ G+PV++ FWA WC + + + LS + + ++V +E P I+ Y + ++ Sbjct: 17 VVRQGAPVILHFWASWCEASKHMDQVFSHLSTDFPHAV-FFRVEAEEQPVISEAYSVSAV 75 Query: 155 PTVMIFKNGEKKDTVIGAVPNPL 177 P + FK+G+ DT+ GA P+ L Sbjct: 76 PYFVFFKDGKTVDTMEGADPSSL 98 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs95907 (231 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs20948 (62 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs97733 (197 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv41793 290 1e-80 >Vv41793 Length = 323 Score = 290 bits (742), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 138/169 (81%), Positives = 156/169 (92%), Gaps = 1/169 (0%) Query: 12 DVSVNARGFIAALIAVWSTSIQQYYVHHLQRKYSLTSFNLLGHTAPAQAATLLVIGPFLD 71 DVSVNA+GFIAA +AVWST++QQYYVH LQRKYSL SFNLLGHTAP QAA+LL++GPFLD Sbjct: 151 DVSVNAKGFIAAFVAVWSTALQQYYVHFLQRKYSLGSFNLLGHTAPVQAASLLLLGPFLD 210 Query: 72 NWLTDKRIYAYDYNIASVIFLILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLI 131 WLT+KR+ Y Y++ SV+F+ILSCTIAVGTNLSQFICIGRFTAVSFQV+GHMKTILVLI Sbjct: 211 YWLTNKRVDNYQYSLISVMFIILSCTIAVGTNLSQFICIGRFTAVSFQVIGHMKTILVLI 270 Query: 132 MGFLFFGKEGLNFHVVLGMIIAVFGMIWYSNASTKPGGKERRS-SLPTT 179 +GFLFFGKEGLN HVVLGMIIAV GMIWY NAS+KPGGKERRS +LP+T Sbjct: 271 LGFLFFGKEGLNLHVVLGMIIAVVGMIWYGNASSKPGGKERRSPALPST 319 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs195106183 (111 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs91356 (433 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv35733 160 4e-41 >Vv35733 Length = 262 Score = 160 bits (405), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 87/249 (34%), Positives = 138/249 (55%), Gaps = 11/249 (4%) Query: 191 NSFEDLEQTELTRLHKDFPIPMFPIGPFHKYCL---AXXXXXXXXXXXCISWLDKQAAKS 247 ++F++LE + + K PI P+GP +K A CI WLD + S Sbjct: 2 DTFQELEPEVIKYMSKICPIK--PVGPLYKNPKVPNAAVRGDFMKADDCIEWLDSKPPSS 59 Query: 248 VMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGR 307 V+Y+SFGS+V + + EIA+GL NS V FLWV++P L LP+GFLE + Sbjct: 60 VVYISFGSVVYLKQDQVDEIAYGLLNSGVQFLWVMKPPHKDAGLELLVLPEGFLEKAGDK 119 Query: 308 GHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVW 367 G +V+W+PQ++VLAHP+V F TH GWNS++E++ G+P++ P +GDQ+ +A+Y+ V+ Sbjct: 120 GKMVQWSPQEQVLAHPSVACFVTHCGWNSSMEALSSGMPVVAFPQWGDQVTDAKYLVDVF 179 Query: 368 RVGLHLERK------FERREIETAIRRVTVEAEGQEMRERIMHXXXXXXXXXXXAGSSYQ 421 +VG+ + R R E+E + T + E+++ M GSS + Sbjct: 180 KVGVRMCRGEAENKLITRDEVEKCLIEATTGEKAAELKQNAMKWKKAAEEAVAEGGSSDR 239 Query: 422 SLERLVDHI 430 +L+ VD + Sbjct: 240 NLQEFVDEV 248 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs13860 (151 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs29934 (249 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64106189 (288 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs54814 (232 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs83759 (140 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41829 (162 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs81139 (104 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv26424 147 3e-38 >Vv26424 Length = 155 Score = 147 bits (372), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 66/82 (80%), Positives = 74/82 (90%) Query: 23 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 82 RLLDAPSLEN H+K VSCGARH+A+I DGK+F WGWNKYGQLGLGDV+DRNIPSQVT++ Sbjct: 74 RLLDAPSLENAHAKIVSCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQVTLD 133 Query: 83 GCVPRNVACGWWHTLLLAVPPT 104 GC P+NVACGWWHTLLLA PT Sbjct: 134 GCTPKNVACGWWHTLLLAESPT 155 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs54940 (230 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100152 (216 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33106181 (158 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs115106185 (97 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96229 (216 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs14915 (100 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100688 (206 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs56923 (174 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs58286 (281 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs101477 (242 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv28330 307 1e-85 >Vv28330 Length = 238 Score = 307 bits (787), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 160/204 (78%), Positives = 174/204 (85%), Gaps = 8/204 (3%) Query: 39 KRGFADTVVDLKLNLSTKESGGIDVIEKTKGKSASATGATDLSKPPAKSQVVGWPPVRSF 98 KRGF++TV DLKLNL +K+S D EK K KSA + D +KPPAK+QVVGWPPVRSF Sbjct: 43 KRGFSETV-DLKLNLLSKDSVA-DQAEKMKEKSA-LPPSNDPAKPPAKAQVVGWPPVRSF 99 Query: 99 RKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKM 158 RKNI+ VQK++ + AFVKVSMDGAPYLRKVDLK+YKSYQELSDALGKM Sbjct: 100 RKNILTVQKNS-----SEEEKASSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKM 154 Query: 159 FSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKR 218 FSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPW+MFV+SCKR Sbjct: 155 FSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVESCKR 214 Query: 219 LRIMKGSEAIGLAPRAVEKCKNRS 242 LRIMKGSEAIGLAPRAVEKCKNRS Sbjct: 215 LRIMKGSEAIGLAPRAVEKCKNRS 238 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs34637 (336 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs98430 (277 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs77739 (182 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs17012 (364 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs72556 (244 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs80709 (246 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs38944 (281 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv11167 546 e-157 >Vv11167 Length = 492 Score = 546 bits (1408), Expect = e-157, Method: Compositional matrix adjust. Identities = 256/275 (93%), Positives = 269/275 (97%) Query: 7 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQT 66 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFE THD+SNLTCADFLRAPGVQT Sbjct: 38 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFETTHDISNLTCADFLRAPGVQT 97 Query: 67 PVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHA 126 PVI+RFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF+RDGMKFPDMVHA Sbjct: 98 PVILRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHA 157 Query: 127 LKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAG 186 LKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVG+P+DYRHMEGSGVNTY LINKAG Sbjct: 158 LKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGIPQDYRHMEGSGVNTYTLINKAG 217 Query: 187 KAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPD 246 KAHYVKFHWKPTCGVKCLLE+EAI+VGG+NHSHATQDLYDSIAAGNYPEWKL+IQ +DPD Sbjct: 218 KAHYVKFHWKPTCGVKCLLEEEAIRVGGSNHSHATQDLYDSIAAGNYPEWKLFIQTIDPD 277 Query: 247 HEDKFDFDPLDVTKTWPEDILPLQPVGRVGFEQDI 281 HEDKFDFDPLDVTKTWPEDILPLQPVGR+ ++I Sbjct: 278 HEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNRNI 312 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs83469 (175 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs63212 (175 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs70579 (121 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7970 (119 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv8066257 201 5e-54 >Vv8066257 Length = 262 Score = 201 bits (510), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 93/112 (83%), Positives = 105/112 (93%) Query: 1 MKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYE 60 MKGDY+RYLAEFK G RK AAE+T+L+YK+AQDIAL +LAPTHPIRLGLALNFSVFYYE Sbjct: 130 MKGDYHRYLAEFKTGPGRKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYE 189 Query: 61 ILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 112 ILNS ++AC +AKQAF+EAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ Sbjct: 190 ILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDI 241 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs75205 (203 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs26204 (137 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs57835 (114 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44263 (324 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11168 (102 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11568 (204 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv51732 229 3e-62 >Vv51732 Length = 180 Score = 229 bits (584), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 122/188 (64%), Positives = 147/188 (78%), Gaps = 18/188 (9%) Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDVGFHLPIDPGAGGSSQANREEVDSR 76 +++D+ RL++M EE K N+M S QD A ++QA+REEVDSR Sbjct: 11 QIEDLNQRLEQMMEEK-------PKAHNDMPSVQDPAAA------AAAAAQASREEVDSR 57 Query: 77 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 136 SVFVGNVDYSCTPEEVQQHFQ+CGTVNRVTIR++K+GQPKGYAYVEFL++EAVQEAL LN Sbjct: 58 SVFVGNVDYSCTPEEVQQHFQACGTVNRVTIRSNKYGQPKGYAYVEFLETEAVQEALLLN 117 Query: 137 ESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRM 196 ESELHGRQLKV+ KRTNVPG+KQ RPRR + ++SR +PP+L PYGYGK+PRFRM Sbjct: 118 ESELHGRQLKVSAKRTNVPGLKQFRPRR----VGFRSRSTHMPPYL-CPYGYGKVPRFRM 172 Query: 197 PMRYSPYY 204 PMRY+PYY Sbjct: 173 PMRYNPYY 180 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18794 (217 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv14913 259 2e-71 >Vv14913 Length = 381 Score = 259 bits (663), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 134/224 (59%), Positives = 168/224 (75%), Gaps = 11/224 (4%) Query: 1 MDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAEVAVPVAHFPXXXXXXXXXXX 60 +DMGGG+WD++TV RAL+AAYNNPERAV+YLYSGIPE AE P A P Sbjct: 162 LDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEG--PPAARPPASGLAVNLPT 219 Query: 61 XXP-------VSGVPNSSPLNMFPQETLSGAPASGLGSLDFLRNNQQFQALRSMVQSNPQ 113 P S PN++PL++FPQ S + G+LDFLRN+ QFQALR+MVQ+NPQ Sbjct: 220 QAPQGPQTTVASSGPNANPLDLFPQGLPSMGSNASAGTLDFLRNSPQFQALRAMVQANPQ 279 Query: 114 ILQPMLQELGKQNPQLLRLIQEHQAEFLQLINEPVDGSEGDMFDQPEQDMPHAINVTPAE 173 ILQPMLQELGKQNP L+RLIQEHQA+FL+LINEPV+G EG++ Q +P A+ +TP E Sbjct: 280 ILQPMLQELGKQNPHLMRLIQEHQADFLRLINEPVEG-EGNVLGQ-LGTVPQAVTITPEE 337 Query: 174 QEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED 217 +E+I+RLEAMGFDRALV+E F AC++NEELAANYLL++ +FE+ Sbjct: 338 RESIERLEAMGFDRALVLEVFFACNKNEELAANYLLDHMHEFEE 381 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104345 (340 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv57483 126 5e-31 >Vv57483 Length = 423 Score = 126 bits (317), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 84/314 (26%), Positives = 157/314 (50%), Gaps = 13/314 (4%) Query: 12 MRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPD 71 M+R+ N I+ + LEY K E E M+ E ++ +I++ K Sbjct: 112 MKRRAENCYILTSNVSLEYDKSEINAGFFYSSAEQREAMVAAERRQVDERVKKIIELKNK 171 Query: 72 L---------VITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQ 122 + VI +KG+ + L++AG+ A+RR ++ + R+ ACG VN D+L Sbjct: 172 VCSGNDNNFVVINQKGIDPPSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLT 231 Query: 123 ESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVAR 182 +G AGL +G+E + F+ + K+P +CT+L++G + + +++ ++D + + Sbjct: 232 PDCLG-WAGLVYEHILGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRSVK 290 Query: 183 NIIKNPKLVPGGGATELTVSATL-KQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVN 241 N +++ +V G GA E+ L + +++G + EA A A +P+TLA+N G++ Sbjct: 291 NTMEDESVVLGAGAFEVAARQYLVNEVKKTVQGRAQLGVEAFADALLVVPKTLAENSGLD 350 Query: 242 VIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLR 301 + AL G+H G +G++ +TG D I+D Y+VK Q + A LL Sbjct: 351 TQDVIIALTGEHDRGN--VVGLNQHTGEPIDPHMEGIFDNYSVKRQIINSGPVIASQLLL 408 Query: 302 IDDIVSGIKKKQAP 315 +D+++ + + P Sbjct: 409 VDEVIRAGRNMRKP 422 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69293 (135 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs740 (131 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs79506 (176 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78333 (232 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs20670 (240 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs14660 (145 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs40476 (122 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv41435 82 4e-18 >Vv41435 Length = 320 Score = 81.6 bits (200), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 1/64 (1%) Query: 3 LFSGYYKNPDLTRESII-DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLE 61 LF GYYK+ T+E I DGW HTGDIG LP G +KIIDRKKN+ K++QGEY+A E +E Sbjct: 127 LFQGYYKDEVQTKEVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIE 186 Query: 62 NVYC 65 NVY Sbjct: 187 NVYA 190 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs26729 (226 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67798 (242 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs5249 (199 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs76152 (290 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs50623 (291 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs75504 (215 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs153106185 (87 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82779 (314 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs12614 (70 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs37297 (133 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs34972 (77 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41093 (250 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs79718 (97 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7972 (279 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67057 (281 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv14039 168 1e-43 >Vv14039 Length = 240 Score = 168 bits (425), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 95/128 (74%), Positives = 103/128 (80%) Query: 1 MIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXX 60 MIK + KVEGL DAVDIVGTGGDGANTVNISTGASILAAACGA VAKQ Sbjct: 113 MIKCSRKVEGLKDAVDIVGTGGDGANTVNISTGASILAAACGANVAKQGNKSSSSACGSA 172 Query: 61 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPM 120 DVLEALG+ I+L+P+GV RCV+E IGFMM+ YHPAMK V PV+KKLKVKTVFNILGPM Sbjct: 173 DVLEALGIAIELNPQGVTRCVNETXIGFMMAPIYHPAMKNVGPVKKKLKVKTVFNILGPM 232 Query: 121 LNPACVPF 128 LNPA VPF Sbjct: 233 LNPARVPF 240 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs53549 (85 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs73368 (58 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs38911 (212 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs77660 (188 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6106186 (109 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100012 (255 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs34284 (236 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs66719 (177 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42241 (189 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11882 (83 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78621 (89 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs51137 (231 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs95088 (212 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs20256 (191 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41958 (248 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs87016 (154 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv45791 110 1e-26 >Vv45791 Length = 161 Score = 110 bits (275), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 95/158 (60%), Gaps = 12/158 (7%) Query: 2 DKKKVMVAIDESECRHYALQWALENL-----GDAISKSDLIIFTARPTEFIYVQASMFGA 56 +K ++V +D+SE YALQW L++ G A K L+I A+P+ + + GA Sbjct: 5 EKSVMVVGVDDSEHSFYALQWTLDHFFAPFPGTAPFK--LVIVHAKPSPTTAIGLAGPGA 62 Query: 57 APPDLLMSIQENQKKXXXXXXGRAKEICAKHGVVAETMTEM--GDPKIVICEAAEKHKIQ 114 A D+L ++ + KK G+A EICA V + + E+ GD + V+CEA EKH Sbjct: 63 A--DVLPYVEADLKKIAGRVVGKAHEICASKSVT-DVILEVVEGDARNVMCEAVEKHHAS 119 Query: 115 LLIVGSHSRGPIQRAFLGSVSNYCVHNAKCPVLVVRKP 152 +L+VGSH G I+RA LGSVS+YC H+A C V++V+KP Sbjct: 120 ILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKP 157 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs23191 (225 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv60295 216 4e-58 >Vv60295 Length = 246 Score = 216 bits (549), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 115/199 (57%), Positives = 139/199 (69%), Gaps = 3/199 (1%) Query: 1 MYAGGYVAEVVGLSPNATEKDIHEFFSHCGDPVHVEIIRSG-ECGGTAYVTFSNAYALET 59 M G+ EV LSP TEKD+++FF+ G VE++RS EC TAYVTF +AYA+ET Sbjct: 1 MSTSGHTIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRSADECACTAYVTFKDAYAVET 60 Query: 60 AVLLSGAAIVDQPVCIIRWGAFTDEPNPWIS-SWGF-DENSGSMTTHVGQFVSTPGEAVT 117 AVLLSGA IVDQ VCI RWG + DE + W +W DE S + + GEAVT Sbjct: 61 AVLLSGATIVDQRVCITRWGHYEDEFDLWNRPTWKLEDETSSTHAPETNRSYPDAGEAVT 120 Query: 118 VAQDAVKTMIAKGYVLSKDALVKAKALDESYGLSASAAAKVAELSNRIGLTDKINASMEA 177 +AQ+ VKTM+AKGY+L KDAL KAK DES+ LSA+A A VAELS RIGLTDK A +EA Sbjct: 121 MAQEVVKTMLAKGYILGKDALSKAKTFDESHQLSATAVATVAELSQRIGLTDKFCAGVEA 180 Query: 178 IKSVDEKYHVSDITKSAAS 196 KSVD++YHVS+ITKSA S Sbjct: 181 AKSVDQRYHVSEITKSAVS 199 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs28197 (267 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs61925 (305 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25868 (245 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs76009 (184 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6310 (212 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64173 (125 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52138 (120 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs95107 (120 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs29712 (119 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59973 (197 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv53808 112 5e-27 >Vv53808 Length = 150 Score = 112 bits (280), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 60/150 (40%), Positives = 89/150 (59%), Gaps = 11/150 (7%) Query: 47 ALKWALDNLYGIVGFTPEAGGGGGILTIVHVQQPFQRFVLPALSTSSAFYATSSMVE--- 103 AL+WALDN I +P + G I+HVQ P + L+ + + + +E Sbjct: 3 ALRWALDN---IKLRSPPSHAEAGSFVILHVQSPPS--IATGLNPGAIPFGGPTDLEVPA 57 Query: 104 ---SVRKSQEENSAALLSRALQMCKDKMVKAESLVLEGDPKDMICQSAEQMHIDLLVVGS 160 ++ Q + A+L AL++C DK V ++ V+ GDPK+ IC++A +H DLLV+GS Sbjct: 58 FTAAIEAHQRRITEAILDHALKICSDKNVNVKTDVVIGDPKEKICEAAVNLHADLLVMGS 117 Query: 161 RGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190 R G I+R FLGSVS+YC +HA CP++IVK Sbjct: 118 RAFGPIRRMFLGSVSNYCTNHAQCPVMIVK 147 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67827 (195 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs169106187 (148 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv41067 302 2e-84 >Vv41067 Length = 148 Score = 302 bits (773), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 144/148 (97%), Positives = 147/148 (99%) Query: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDY 60 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLVTIHFPPDY Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60 Query: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120 Query: 121 PEIAHMYKSDKAKYESTARSWTQKYAMG 148 PEIAHMYK+D+AKYE+TARSWTQKYAMG Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs2364 (191 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67321 (212 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67555 (246 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4029 (266 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs46215 (158 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs32345 (190 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2398 114 1e-27 >Vv2398 Length = 226 Score = 114 bits (285), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 52/75 (69%), Positives = 58/75 (77%) Query: 66 CQVDKCGADLSDAKQYHRRHKVCEVHAKAQVVLMGGIRQRFCQQCSRFHELSEFDETKRS 125 CQ + C ADL+ AK YHRRHKVCE H+KA V G+ QRFCQQCSRFH LSEFD KRS Sbjct: 75 CQAEGCNADLTHAKHYHRRHKVCEFHSKASTVFAAGLTQRFCQQCSRFHLLSEFDNGKRS 134 Query: 126 CRRRLAGHNERRRKN 140 CR+RLA HN RRRK+ Sbjct: 135 CRKRLADHNRRRRKS 149 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88716 (201 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs51829 (262 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs62609 (90 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs98630 (173 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33343 (298 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv11566258 109 6e-26 >Vv11566258 Length = 537 Score = 109 bits (273), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 48/58 (82%), Positives = 56/58 (96%) Query: 5 TITKQRERWTEEEHKKFLEALKLFGRAWRKIEEHVGTKTAVQIRSHAQKFFSKVVRES 62 TITKQRERWTEEEH +FLEALKL+GRAW++IEEH+GTKTAVQIRSHAQKFFSK+ +E+ Sbjct: 142 TITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEA 199 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78797 (177 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv37204 170 1e-44 >Vv37204 Length = 181 Score = 170 bits (431), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 91/177 (51%), Positives = 109/177 (61%), Gaps = 9/177 (5%) Query: 6 TWIDHFLACMGGCFGCCTKSTPIIAVDEPTKGLRIQGRAVKKPSISDDFWSTSTCDLEXX 65 +WI H +ACMGGC GCC+K T II V E KGL IQGR +PS +DFWSTST +++ Sbjct: 9 SWICHIVACMGGCLGCCSKPTEIIGVYESPKGLTIQGRTAMRPSPVEDFWSTSTGEMDNS 68 Query: 66 XXXXXXXXXXXXXXXXXLN---HCSGTSSNSDFVNHGLILWNQVRMQWIGSSKSENRTQ- 121 + + TS+ +FVNHGL+LWNQ R QWIG+ KS+NR Q Sbjct: 69 AVQSQGSISSISTSNQTFDPHSNAGSTSNPPEFVNHGLLLWNQTRQQWIGNQKSQNRKQV 128 Query: 122 QSWESKSST-LDFLALSSWPATYESLLGTKNPFPRPIPLSEMVDLLVDVWEHEGLYD 177 Q +S T +D W ATYESLLGT P P+PIPL EMVD LVDVWE EGLYD Sbjct: 129 QEPRIRSETSIDH----GWNATYESLLGTNKPLPQPIPLPEMVDFLVDVWEQEGLYD 181 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs19677 (242 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs48779 (116 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs92264 (486 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2739 176 8e-46 >Vv2739 Length = 256 Score = 176 bits (446), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 96/246 (39%), Positives = 154/246 (62%), Gaps = 2/246 (0%) Query: 232 NLFRGFDERLLAEAFNVNPDLXXXXXXXXXXXXXXXXVEEELRVLSPQRDRXXXXXXXXX 291 N+F GFD + LAEAFNV+ L VE L+ L P R + Sbjct: 7 NIFSGFDAQQLAEAFNVDVQLIRKLQGQNDRRGNIVRVEGGLQALLPPRGQQERGEQQQD 66 Query: 292 TPSYERDNGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDL-QLSAEK 350 + R NG+EETIC+++L+ NI P ADVY PR G ++V ++LP+L+ L +LSA K Sbjct: 67 H-LHARGNGYEETICSLRLKQNIGDPWRADVYTPRGGHRSSVTGYDLPVLQKLVKLSAHK 125 Query: 351 GNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVV 410 G LY AL+ P +N+NA+S++Y RG+ R+Q+V + + V + ++++GQ++V+PQ FA + Sbjct: 126 GRLYQGALVLPYYNVNANSVIYAIRGSARIQVVQQQDQTVANEEVQQGQVLVIPQNFAAL 185 Query: 411 KRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQEL 470 +A + G E+++ KT++ AM + LA S++R +P+ VI +++Q S +EA++L+ NR E Sbjct: 186 IKARDSGFEYVAIKTDENAMINTLASNLSLMRAMPVQVIASAYQASNNEAKQLRRNRAES 245 Query: 471 TVFTPG 476 T+ PG Sbjct: 246 TIGAPG 251 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs23497 (145 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs2987 (65 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs13607 (200 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs21414 (61 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60808 (244 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs115106187 (206 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52491 (193 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs99541 (211 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv58529 360 e-102 >Vv58529 Length = 209 Score = 360 bits (925), Expect = e-102, Method: Compositional matrix adjust. Identities = 175/211 (82%), Positives = 185/211 (87%), Gaps = 2/211 (0%) Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60 MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60 Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMTIMLIGNK Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120 Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180 CDLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+GVFD+SN Sbjct: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQNIQEGVFDLSN 180 Query: 181 ESYGIKVXXXXXXXXXXXXXXXXXQAGGCCS 211 ES GIKV Q GGCC+ Sbjct: 181 ESSGIKV--GYGRPQGPSGDGTVSQRGGCCN 209 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs23106181 (186 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs30918 (106 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs97445 (230 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv18590 289 3e-80 >Vv18590 Length = 203 Score = 289 bits (740), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 136/173 (78%), Positives = 150/173 (86%) Query: 58 FIIVADSDFKFIVQDVRSRDGIVFHYGVFENSGGEFETELEKGKEVRLWVDESRRKLNSR 117 FI +++SD KFIVQDVRS+DG+VFHYG ENS E E++LEKGKEV L VDESRRKLNSR Sbjct: 3 FIAISESDIKFIVQDVRSKDGVVFHYGFIENSNEELESKLEKGKEVSLHVDESRRKLNSR 62 Query: 118 LHSAGHLLDVCMQKVGLGHLEPGKGYHFPDGPYVEYKGSVPQNELQSKTKELELEANALI 177 LHSAGHLLD+CM+ VGLG+LEPGKGYHFPDGP+VEYKG VPQNELQ K KELEL+ANALI Sbjct: 63 LHSAGHLLDICMRTVGLGNLEPGKGYHFPDGPFVEYKGVVPQNELQGKQKELELDANALI 122 Query: 178 SRGGKVMVAVLPYEEASMLCGGCLPHYIPQGSTPRIVKLGDNPGCPCGGTQVS 230 SRGGKV VLPY EA LCGGCLP YIP+ S PRI+KLGDNPGCPCGGT VS Sbjct: 123 SRGGKVSAVVLPYAEAVELCGGCLPDYIPKSSNPRILKLGDNPGCPCGGTHVS 175 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs70679 (261 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52096 (216 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv18823 232 3e-63 >Vv18823 Length = 184 Score = 232 bits (592), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 115/217 (52%), Positives = 148/217 (68%), Gaps = 38/217 (17%) Query: 1 MGSEGPKAVTIHINGFKKFQGIAENPTETVVNNLKAYVERRGLPAGVTLGSCTVLEAAGD 60 MGSEGP AVTIH+ GFKKF G+++NPTET+V+NL+ Y+++ GLP G+ LGSC +LE AG Sbjct: 1 MGSEGPPAVTIHVTGFKKFHGVSDNPTETIVSNLQEYMKKNGLPKGLILGSCNILETAGQ 60 Query: 61 GALPTLLKTLESSIS---QTNSNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLG 117 GAL L +TL+S+IS +SN++++IW Sbjct: 61 GALVPLYQTLQSAISGKDSESSNSKRIIW------------------------------- 89 Query: 118 WQPQQIPVVLEDGGISRSRQTSLSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRF 177 ++P++ DGGISR+R+TSL E I K L K G++V+ SDDAGRFVCNYVYYHSLRF Sbjct: 90 ----KVPIIPADGGISRTRETSLPVEEITKTLTKMGYEVMPSDDAGRFVCNYVYYHSLRF 145 Query: 178 AEQKGHKSLFVHVPLFSTIDEDTQMQFVATLFEAVAS 214 AEQ G +SLFVHVPLF TIDE+TQMQF A+L E +AS Sbjct: 146 AEQSGIQSLFVHVPLFLTIDEETQMQFAASLLEVLAS 182 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs18552 (97 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52645 (186 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs34256 (91 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7496 (200 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv6626 96 3e-22 >Vv6626 Length = 210 Score = 96.3 bits (238), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 53/116 (45%), Positives = 79/116 (68%), Gaps = 11/116 (9%) Query: 1 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSA 60 M R K+Q++RIEN + QVTFSKRR+GL+KKA ELSVLCD ++A++IFS +GRLYEF S+ Sbjct: 1 MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60 Query: 61 DSLASILERYQSRITEEAVASGAPKAE--------DPQAGYSSLQLLKIVQRQLEG 108 + + S +ERY+ + V + P+ E D ++ ++LL++ QR+L G Sbjct: 61 N-MQSAIERYREHAKQ--VETNNPELEQYMQNLKQDAESMAKKIELLEVSQRKLLG 113 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs23028 (80 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv6626 101 2e-24 >Vv6626 Length = 210 Score = 101 bits (252), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 48/80 (60%), Positives = 63/80 (78%) Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60 M RG+++++RIEN +RQVTF+KRRNGLLKKAYELSVLCDAEVA+IIFS +G+LYEF SS Sbjct: 1 MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS 60 Query: 61 SRYTHMHTDMLSPKQLNSYN 80 + + + KQ+ + N Sbjct: 61 NMQSAIERYREHAKQVETNN 80 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs32673 (185 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs17743 (170 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42225 (262 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs30951 (59 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs24443 (235 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs105838 (245 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv6166264 456 e-130 >Vv6166264 Length = 381 Score = 456 bits (1174), Expect = e-130, Method: Compositional matrix adjust. Identities = 231/234 (98%), Positives = 232/234 (99%) Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120 Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180 Query: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKGSTLHLVLRLRGCMQIFVE 234 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK STLHLVLRLRG MQIFV+ Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 234 Score = 456 bits (1174), Expect = e-130, Method: Compositional matrix adjust. Identities = 231/234 (98%), Positives = 232/234 (99%) Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196 Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256 Query: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKGSTLHLVLRLRGCMQIFVE 234 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK STLHLVLRLRG MQIFV+ Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 310 Score = 446 bits (1148), Expect = e-127, Method: Compositional matrix adjust. Identities = 226/227 (99%), Positives = 226/227 (99%) Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272 Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 332 Query: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKGSTLHLVLRLRG 227 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK STLHLVLRLRG Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 379 Score = 303 bits (775), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 152/153 (99%), Positives = 152/153 (99%) Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288 Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348 Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 381 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69806 (232 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs14479 (84 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs51106185 (247 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25420 (138 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs70317 (100 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs91669 (141 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs72108 (189 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv57603 363 e-102 >Vv57603 Length = 189 Score = 363 bits (931), Expect = e-102, Method: Compositional matrix adjust. Identities = 175/189 (92%), Positives = 182/189 (96%) Query: 1 MSFIGTQQKCKVCEKTVYPVEQLSADGIVYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60 MSFIGTQQKCK C KTVYPVEQLSADG+VYHKSCFKCSHC GTLKLSNYSSMEGVLYCKP Sbjct: 1 MSFIGTQQKCKACLKTVYPVEQLSADGVVYHKSCFKCSHCNGTLKLSNYSSMEGVLYCKP 60 Query: 61 HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAASMFSGTQEKCASCSKTVYPLEK 120 HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAASMFSGTQEKCA+C KT YPLEK Sbjct: 61 HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120 Query: 121 VAVENQAYHKTCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180 V VE+QAYHK+CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSASMK Sbjct: 121 VTVESQAYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASMK 180 Query: 181 RAAASVPEA 189 R+AASVP+A Sbjct: 181 RSAASVPDA 189 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60298 (197 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs15458 (555 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11592 (220 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs39821 (258 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv63082 308 8e-86 >Vv63082 Length = 193 Score = 308 bits (788), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 146/171 (85%), Positives = 160/171 (93%), Gaps = 2/171 (1%) Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTV 60 MAST CFLHHHALST P R SS QR + +++P+Q+VCRAQKQA EDDG+AVSRRLALTV Sbjct: 1 MASTACFLHHHALST-PTRVSS-QRQLPSLRPSQLVCRAQKQAANEDDGAAVSRRLALTV 58 Query: 61 LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPG 120 LIGAAA+G+KV+PADAAYGE+ANVFGKPKTNTDFLPYNG+GFKLSIPSKWNPSKEREFPG Sbjct: 59 LIGAAAIGTKVNPADAAYGEAANVFGKPKTNTDFLPYNGEGFKLSIPSKWNPSKEREFPG 118 Query: 121 QVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSG 171 QVLRYEDNFD NSNVSVIITPTDKKSITDYGSPEEFLSKVD+LLGKQA+ G Sbjct: 119 QVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDFLLGKQAFFG 169 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs97092 (93 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs38499 (88 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs13926 (213 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4263 (239 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs81333 (370 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv9179 648 0.0 >Vv9179 Length = 371 Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/370 (85%), Positives = 335/370 (90%), Gaps = 2/370 (0%) Query: 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMN 62 EITNV EYEAIAK+KLPKMVFDYYASGAEDQWTL +NR+AFS+ILFRPRILIDVSKIDM Sbjct: 2 EITNVTEYEAIAKQKLPKMVFDYYASGAEDQWTLYQNRHAFSQILFRPRILIDVSKIDMT 61 Query: 63 TTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP 122 TTVLGFKISMPIMIAPTAMQKMAHPEGEY GTIMTLSSW+TSSVEEVASTGP Sbjct: 62 TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGP 121 Query: 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK 182 GIRFFQLYVYKDR+VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK Sbjct: 122 GIRFFQLYVYKDRHVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK 181 Query: 183 NFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXX 242 NF+GLDLGKMD+A+DSGLA+YVAGQIDR+LSWKDVKWLQTIT LPILVKGVLTAED Sbjct: 182 NFEGLDLGKMDKADDSGLASYVAGQIDRTLSWKDVKWLQTITNLPILVKGVLTAEDTRLA 241 Query: 243 XXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 302 SNHGARQLDYVPATIMALEEVVKA QGR+PVFLDGGVRRGTDVFKALALG Sbjct: 242 IQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALG 301 Query: 303 ASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDAS 362 ASGIFIGRPVV+SLAAEGE GVR+VL+MLREEFEL MALSGCRSLKEITRDHIVTEW+ Sbjct: 302 ASGIFIGRPVVFSLAAEGEAGVRKVLQMLREEFELTMALSGCRSLKEITRDHIVTEWEVP 361 Query: 363 LP--RPVPRL 370 P RP+PRL Sbjct: 362 RPGSRPLPRL 371 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs36721 (287 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4826 (268 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv12866259 338 5e-95 >Vv12866259 Length = 264 Score = 338 bits (867), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 173/219 (78%), Positives = 184/219 (84%), Gaps = 4/219 (1%) Query: 50 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109 WYGPDRV YLGP S PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG Sbjct: 48 WYGPDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 107 Query: 110 ALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 169 ALGC+ PE+L + V F E VWFKAGAQIFSEGGLDYLGNP+L+HAQSILA+ QV+L Sbjct: 108 ALGCVFPELLSR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVIL 166 Query: 170 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 228 MG VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF Sbjct: 167 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 224 Query: 229 GFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 267 GFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG Sbjct: 225 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 263 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs70492 (156 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs54530 (247 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv22966256 211 1e-56 >Vv22966256 Length = 306 Score = 211 bits (536), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 115/243 (47%), Positives = 144/243 (59%) Query: 1 MAIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAI 60 + IA G+ D++ + K LAEF TL+FVFAG GS +AF+K+T D + P+GL+A A+ Sbjct: 59 LRIAIGQPQDTYHPDALKKALAEFFGTLIFVFAGEGSGMAFSKLTDDGSTTPAGLIAEAL 118 Query: 61 CHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKV 120 H NISGGH+NPAVTFG +GG IT+L GI YWIAQLLGS VA LLK Sbjct: 119 GHGLGLFVAVSGAWNISGGHINPAVTFGAFVGGNITLLRGILYWIAQLLGSAVACLLLKF 178 Query: 121 VTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIV 180 T G+ TFGLVYTVYATA DP+ G++G IAP+AIG IV Sbjct: 179 CTHGMTTSAFAISSGETVWNAFVLEIVMTFGLVYTVYATAIDPRNGNVGIIAPLAIGLIV 238 Query: 181 GANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHSEH 240 ANILA G F G SMNPA SFGPA+ S ++ ++W+YW +F+ H Sbjct: 239 AANILAGGAFDGASMNPAMSFGPALVSWDWTNHWVYWAGPLIGGGIAGFVYETIFIDRTH 298 Query: 241 APL 243 PL Sbjct: 299 EPL 301 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100704 (122 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv30658 72 3e-15 >Vv30658 Length = 237 Score = 72.0 bits (175), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 4/98 (4%) Query: 24 NGEHMLIEVDIEASVQNKGHXXXXXXXXXXXXXXLQRTAPSSNRPYYQLDHFAGIEQLDD 83 NG+++ E D E SV + L R+A S +RPY+QLD AG++Q+D Sbjct: 65 NGKNLCNEADKETSVHDGDISSGSSIGGGFTEASLHRSAFSRDRPYFQLDELAGMDQMDT 124 Query: 84 ILDDIYLNSLLEDLPATEDLYNSFGFDPESQHNLTGDN 121 I +L SLLEDLP TE+ +F F PESQH+ +N Sbjct: 125 I----FLTSLLEDLPNTENFNRTFCFSPESQHSAMPEN 158 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs78778 (170 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv12866259 80 2e-17 >Vv12866259 Length = 264 Score = 80.5 bits (197), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 18/126 (14%) Query: 61 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAG 118 P+R L+ PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G Sbjct: 51 PDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110 Query: 119 IFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLF--------IVEMIFIGWA 162 PELL++ G+ W+ AG L+Y + + + ++I +G Sbjct: 111 CVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAV 170 Query: 163 EGRRWA 168 EG R A Sbjct: 171 EGYRIA 176 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs539 (244 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs63107 (342 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2794 258 8e-71 >Vv2794 Length = 297 Score = 258 bits (660), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 127/262 (48%), Positives = 174/262 (66%), Gaps = 16/262 (6%) Query: 30 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGT 89 F +DF +TW D + ++ G + L LD+ SG GF SK +YLFG++ M++KLVPG+SAGT Sbjct: 32 FYQDFGITWGDGRAKILDNGEFLTLSLDKTSGSGFQSKNEYLFGKIDMQLKLVPGNSAGT 91 Query: 90 VTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHL 149 VTA+Y++S DE+DFEFLGN +G PY + TN+++ GKG+REQ+ LWFDP AD+H Sbjct: 92 VTAYYLSSQGP-THDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHT 150 Query: 150 YTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKID 207 Y+ILWN I+F VD PIR +KNS P+P NQPM +YS+LW ADDWATRGGL K D Sbjct: 151 YSILWNPQRIIFSVDGTPIREFKNSESIGVPYPKNQPMRIYSSLWNADDWATRGGLIKTD 210 Query: 208 WSKAPFYAYYRDFDIEGCP-VPGPANCASNP-------GNWWEANNYQPSPHGNKEIQMG 259 W++APF A YR+F+ + C G ++C+SN +W+ S K +Q Sbjct: 211 WTQAPFTASYRNFNADACIWFFGASSCSSNTPTSISPCTDWYSQELDSTSQERMKWVQ-- 268 Query: 260 SSHHMIYDYCTDKSGYP--VPP 279 ++MIY+YCTD +P +PP Sbjct: 269 -KNYMIYNYCTDTKRFPQGLPP 289 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs1106182 (241 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs12983 (76 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs47367 (140 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv30088 228 4e-62 >Vv30088 Length = 140 Score = 228 bits (580), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 108/140 (77%), Positives = 123/140 (87%) Query: 1 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDC 60 MI AGADF+LIPSRFEPCGLIQLHAMRYGTVPI A+TGGLVDTV+EGFTGF MG F+V+C Sbjct: 1 MITAGADFMLIPSRFEPCGLIQLHAMRYGTVPICAATGGLVDTVKEGFTGFHMGPFNVEC 60 Query: 61 EAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 120 + +DP DV AV+ TV+RALATYGT AL EM++N MA DLSWKGP+K WEE LL+L AG Sbjct: 61 DRIDPADVDAVAITVKRALATYGTAALGEMIQNCMALDLSWKGPSKNWEELLLSLGPAGC 120 Query: 121 EPGIDGEEIAPLAKENVATP 140 +PGI+GEEIAPLAKENVATP Sbjct: 121 QPGIEGEEIAPLAKENVATP 140 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104106187 (354 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2967 62 2e-11 >Vv2967 Length = 262 Score = 61.6 bits (148), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 12/130 (9%) Query: 203 EPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVY-E 260 E YP +C +Q +N++ +I Y + + E + + N PV V+ Sbjct: 17 EEDYPYKASDGRC---DQYRKNARVVTIDGYEDVPENDEKSLEKAVANQPVSVAIEAGGR 73 Query: 261 DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKR-- 318 +F Y+SG++ G + H V +G+GT ++G DYWI+ N W SWG +GY +++R Sbjct: 74 EFQLYQSGIFTGRCGTALD-HGVTAVGYGT-ENGVDYWIVKNSWGASWGEEGYIRMERDL 131 Query: 319 ---GSNECGI 325 + +CGI Sbjct: 132 ATSATGKCGI 141 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs10433 (87 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs10036 (267 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs69649 (213 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs314 (386 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs91270 (76 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs48857 (229 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs29417 (233 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv34770 75 9e-16 >Vv34770 Length = 201 Score = 75.5 bits (184), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 11/166 (6%) Query: 48 VRAQAGGENKDTSVDVHVNSGNQGTQAERRPRRTALDILPFGLMDPSFPTRTMRQMLDTM 107 +R + + +T+ V + + + RPR + ++ + DP TR++ Q+L+ M Sbjct: 23 IRVASASRSFNTNAQVADYNDGEDRRTVSRPRYSPSNLFS-DVFDPFSRTRSLSQVLNLM 81 Query: 108 DRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVI 167 D+ +E+ + R G G R WD+KEE++ + +R DMPGL L+I Sbjct: 82 DQFMENPLVAASR---GMGAVSRRGWDVKEEKDALFVRMDMPGLGKEDVKVSVEQNTLII 138 Query: 168 KGEHRAEEAGGDPSWSGASFSSYDTRLQLPDNCEK-DKVKAELKNG 212 KGE GG + + Y +R+ LP N K D++KAE+KNG Sbjct: 139 KGE------GGKELENDETGRKYTSRIDLPANLYKFDEIKAEMKNG 178 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs100001 (185 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs119106187 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs16821 (83 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs85520 (234 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs84309 (210 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv29860 216 3e-58 >Vv29860 Length = 247 Score = 216 bits (549), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 125/241 (51%), Positives = 147/241 (60%), Gaps = 46/241 (19%) Query: 8 LVPPWLEPMLRTAFFTVCRTHGDAARSECNMYCLDCNDHAFCFYCRSSKHKDHQVIQIRR 67 L PPWL+PMLR ++F C HGD+ +SECNM+CLDC A C YC HKDH V+QIRR Sbjct: 13 LGPPWLKPMLRASYFVPCGIHGDSNKSECNMFCLDCMGDALCSYCLI-HHKDHCVVQIRR 71 Query: 68 SSYHDVVRVGEIQNIMDISGVQTYVINSARVVFLNERPQPRSGKGVAHICEICGRSLLDP 127 SSYH+VVRV EIQ +DIS VQTYVINSA++VFLNERPQPR GKGV + CEIC RSLLD Sbjct: 72 SSYHNVVRVNEIQKYIDISCVQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDS 131 Query: 128 FRFCSLGCKLAGIKR-DGNASFTLEIKN--EAF-------------MERKEGISRQVSSR 171 FRFCSLGCKL +KR D + +F L++K+ E F +R SR + Sbjct: 132 FRFCSLGCKLGAMKRGDPDLTFWLKLKHGRETFHGSESDESSTPRKFQRTHLFSRLMIDG 191 Query: 172 KQEELREDSQHD--------------------IYPPTTHKPP----SSARRRKGVPHRAP 207 L D HD I P T PP S+ARRRKG+PHRAP Sbjct: 192 PTISL--DGHHDATVAADKSTASSSGDETINNISPAT---PPIFNHSNARRRKGIPHRAP 246 Query: 208 F 208 F Sbjct: 247 F 247 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs27169 (201 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv58826 200 1e-53 >Vv58826 Length = 240 Score = 200 bits (509), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 93/114 (81%), Positives = 103/114 (90%) Query: 1 MHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHE 60 MHPIYRLL PHFRYTM IN AR++L+NA+GIIESSFSPGKYS+E SSVAYD+QWRFD E Sbjct: 127 MHPIYRLLHPHFRYTMHINAHARESLINAEGIIESSFSPGKYSVELSSVAYDQQWRFDRE 186 Query: 61 ALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYY 114 ALP DLI+RG+AVEDP APHGLKL IEDYPFANDGL LWDA+KQWV DYVN+YY Sbjct: 187 ALPADLINRGIAVEDPDAPHGLKLLIEDYPFANDGLILWDALKQWVADYVNYYY 240 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs43484 (294 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs99447 (171 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs40532 (203 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs92894 (170 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs26557 (185 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv19217 328 3e-92 >Vv19217 Length = 185 Score = 328 bits (842), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 155/185 (83%), Positives = 175/185 (94%) Query: 1 MEQSSAVKCPSISYHLAGTKKIQQELAKPNVLERFLDNKEDIAKVRKCFAGLWSLDDSEN 60 MEQSSAVKCPSISYHLAGTKKIQQELAKPNVLERFL+NK+DIAK+RKCFAGLWSLDDS Sbjct: 1 MEQSSAVKCPSISYHLAGTKKIQQELAKPNVLERFLENKDDIAKLRKCFAGLWSLDDSNI 60 Query: 61 VSKAIENPELYVMKPQREGGGNNIYGEDVKETLLRLKKDGTDEDAAYILMQRIFPSVSLT 120 + +AIE PE++VMKPQREGGGNNIYG+DV+ETLLRL+K+GT+EDAAYILMQRIFP+VS T Sbjct: 61 IKEAIERPEVFVMKPQREGGGNNIYGDDVRETLLRLQKEGTEEDAAYILMQRIFPNVSPT 120 Query: 121 FLMRDGICHKDHAISELGIYGAYLRIKEKVIMNEQSGYLMRTKVASSNEGGVAAGFAVWX 180 FLMR+GIC+KDHAISELGIYGAYLR KEKVI+N+Q G+LMRTKV+SSNEGGVAAGFAV Sbjct: 121 FLMREGICYKDHAISELGIYGAYLRNKEKVIINDQCGHLMRTKVSSSNEGGVAAGFAVLD 180 Query: 181 RLYLT 185 +YLT Sbjct: 181 SIYLT 185 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs56622 (79 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs5901 (407 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs22934 (166 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41942 (98 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96276 (265 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64324 (310 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2866 327 1e-91 >Vv2866 Length = 318 Score = 327 bits (839), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 156/306 (50%), Positives = 213/306 (69%), Gaps = 12/306 (3%) Query: 5 IPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKG 64 PVI+ L GE R TM ++ ACE WGFF++ NHGI + M+ V++L HY + ++ Sbjct: 4 FPVINMEMLNGEERGATMEMIKDACENWGFFELVNHGISHEQMDAVEKLTKGHYRKCMEQ 63 Query: 65 GFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIAQLI 124 F + K+LE + I+D+DWESTFF+ H P SN+++ +L E++R M+D+ +L Sbjct: 64 RFKELVAAKALEGV-QTEIKDMDWESTFFLRHLPVSNVSDFPDLDEEYRKVMKDFALKLE 122 Query: 125 KLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGG 184 KLAE+L +L+CENLGLEK Y+K AF G KGP+ GTKV+ YP CP P+L++GLR HTDAGG Sbjct: 123 KLAEELLDLLCENLGLEKGYLKKAFHGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGG 182 Query: 185 IILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKN 244 IILL QDD V GL+ KDG+WV +PP R ++I VN GDQ+EV++NG+Y+S LHRV+ + + Sbjct: 183 IILLFQDDTVSGLQLLKDGQWVDVPPMR-HSIVVNLGDQLEVITNGKYKSVLHRVVAQTD 241 Query: 245 GSRLSIATFYNPANDAIISPAIKLL---------YPSYYSFQDYLKLYGTTKFSDKVPRL 295 G+R+SIA+FYNP NDA+I PA LL YP + F DY+KLY KF K PR Sbjct: 242 GNRMSIASFYNPGNDAVIYPAPALLEKEAENDQVYPKFV-FDDYMKLYSGLKFQAKEPRF 300 Query: 296 ESMKEI 301 E+MK + Sbjct: 301 EAMKNV 306 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs76227 (409 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv26166 213 6e-57 >Vv26166 Length = 320 Score = 213 bits (541), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 122/318 (38%), Positives = 183/318 (57%), Gaps = 17/318 (5%) Query: 89 RSLKVQGKYGEHEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIE--ESGHFKLLHLADG 146 RS + + + E+R V R++LLETLA +LP+ +I +SS++ IE E+G LL L DG Sbjct: 12 RSFRFKDEDESQEVRAVERRILLETLANQLPTDSIHFSSKLAKIERIETGE-TLLELEDG 70 Query: 147 TILKTKVLIGCDGVNSIVAKWLGFKNPAFVGRSAIRGYSDFKGSHGFEPNFLQFFGKGLR 206 T L K++IGCDG+ S VAKW+GF P +VG A RG F +EP +G+GLR Sbjct: 71 TRLSGKIVIGCDGIRSPVAKWMGFSEPRYVGHCAFRGLGFFPERMPYEPKVNYVYGRGLR 130 Query: 207 SGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDLPAKVKAVIEKTPLDSI 266 +G++P +YWF + S S ++ D S LK+ + + P+++ +I+ TP D+I Sbjct: 131 AGYVPVSPTKVYWFICFNSPSPGPKITDPSV-LKKQARELVRNWPSELLNIIDLTPDDTI 189 Query: 267 ISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALK 326 I + L R + S G V + GDA HPMTP++GQG C ALED +VLA+ +++AL+ Sbjct: 190 IRTPLVDRWLWPAISPPASSGGVVLVGDAWHPMTPNLGQGACCALEDAVVLAKKLSDALR 249 Query: 327 TKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISTAYLVGSIQQSDGKILNFLRDKI 386 +G E VE L+ Y ER R F L A LVGS+ Q D ++ +R+ + Sbjct: 250 ----LGPES-------VEGALRLYGSERWPRIFPLTMRANLVGSLLQWDNPVVCSVRNNV 298 Query: 387 LASFLV--GLLIKKADFD 402 + LV G L++ +F+ Sbjct: 299 IVPKLVRLGPLLEHTNFE 316 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42987 (124 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs132106182 (183 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv56231 120 1e-29 >Vv56231 Length = 362 Score = 120 bits (301), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 93/167 (55%), Gaps = 16/167 (9%) Query: 2 DGRPDKPPLLLRMASDCEDGKFLSALGAFRCRIVYANVSYDHMVGWRTSSIRRETELVKP 61 D PPLL RM DC + F+SAL +F R++Y+NV YDH+VGWRTSSIRR +EL K Sbjct: 208 DDDEGNPPLLRRMIEDCGELHFMSALHSFTRRVIYSNVGYDHIVGWRTSSIRRNSELPKW 267 Query: 62 PRRSLDGYKHVVDVEYCPPVSSDGPHFTSEAIKAKEAAQNEPNAQNTSEYHVIMEEEMIR 121 + Y H+V E+C KA +A Q EP++ +EEE++ Sbjct: 268 EDVVNEKYPHIVFEEHC---------------KACDAEQCEPSSMEDDGLDK-LEEELLM 311 Query: 122 GLQRLGWKKVDVSFHSAFWPFFAHNNIHVKNEWLHNAGTGVIAHVAD 168 GL + W+KVDVSFH+ F AH+ I VK+ H G VI H+ D Sbjct: 312 GLSCVSWEKVDVSFHACRQRFAAHSVIQVKDYVAHREGADVIQHMID 358 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs23947 (144 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60695 (277 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs8368 (125 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs35513 (106 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs75740 (112 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs27289 (413 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv47102 390 e-110 >Vv47102 Length = 411 Score = 390 bits (1002), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/302 (62%), Positives = 231/302 (76%), Gaps = 12/302 (3%) Query: 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERV 139 EI+TLW+GDL WMD+ YL TCF HTGEV ++K+IRNKQTGQ EGYGF+EF SRA AE++ Sbjct: 76 EIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKI 135 Query: 140 LQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT-PDHTIFVGDLAADVTDYMLQETFRARY 198 L ++NGT MPN EQ FRLNWA+F G++R D D +IFVGDLA+DVTD +LQETF RY Sbjct: 136 LHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFATRY 195 Query: 199 PSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKKTVS 258 PS KGAKVV D TGR+KGYGFVRFGDE+E+ RAM EMNG++CS+RPMRIG AT KK Sbjct: 196 PSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASG 255 Query: 259 GQQQYPKASY-------QNSQVA---QSDDDPNNTTVFVGNLDSIVTDEHLRELFSQYGQ 308 QQQY + N VA Q++ D NTT+FVG LDS VTDE LR+ FSQ+G+ Sbjct: 256 YQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGE 315 Query: 309 LVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDP-NQ 367 +V VKIP GK CGFVQFA+R+ AE+AL+ LNGT +G Q +RLSWGR+P++KQ + D NQ Sbjct: 316 VVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQWRNDSNNQ 375 Query: 368 WN 369 WN Sbjct: 376 WN 377 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11086 (145 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs91001 (164 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs55446 (212 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv11866265 172 3e-45 >Vv11866265 Length = 337 Score = 172 bits (437), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 97/212 (45%), Positives = 125/212 (58%), Gaps = 26/212 (12%) Query: 1 MEFHXXXXXXXXXXXXVASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNV 60 MEFH + SHA + E+YW ++LPN+PMPK+++D+L+PD++EDKS+SV+V Sbjct: 1 MEFHLLPILAFLCLA-LTSHAVLPSEVYWNSMLPNTPMPKSIRDVLRPDLVEDKSSSVDV 59 Query: 61 GKGGVNVDAGKXXXXXXXXXXXXXXXXXXXXXXXDKRXXXXXXXXXXXXXXXXXXXPVYV 120 GKGGVNVDAG+ K PVYV Sbjct: 60 GKGGVNVDAGQGKPGGGTNVGVGKGGVSVNTGHKGK--------------------PVYV 99 Query: 121 GVSP----FNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAA 176 GV+P F Y YAA E+QLH DP+ ALFF+EKD+ PG KMNLHF + + ATFL Q+ Sbjct: 100 GVTPGPNPFAYKYAATEDQLHADPSVALFFMEKDMRPGTKMNLHFIKNTKEATFLP-QSE 158 Query: 177 KSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNT 208 FSS+KLPEI FSVKP SVEA+I++NT Sbjct: 159 HPIIFSSEKLPEILKHFSVKPESVEAQIIKNT 190 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41128 (199 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs43783 (180 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs72898 (395 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67121 (60 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs51284 (74 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs68684 (213 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3108 270 1e-74 >Vv3108 Length = 235 Score = 270 bits (691), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 129/167 (77%), Positives = 147/167 (88%) Query: 47 KARKLSLFPRFRRIGHKAKVKSPESEINSVAEAFTNFKHLLLPITDQNPYLSEGTRQXXX 106 K KLS+FP ++GH+AK K +SE+N AEAFT+FKHLLLP+TD+NPYLSEGTRQ Sbjct: 69 KTSKLSIFPGLLKLGHRAKSKPQDSEVNLAAEAFTSFKHLLLPVTDRNPYLSEGTRQAAA 128 Query: 107 XXXXXXKKYGADITVVVIDERQKESLPEHENRLSSIRWHLSEGGFQEFRLLERLGEGSSK 166 KKYGADITVVVIDE+QKES+PEH+ +LSSIRWHLSEGGFQEFR+LERLGEGSSK Sbjct: 129 TTAALAKKYGADITVVVIDEKQKESIPEHDTQLSSIRWHLSEGGFQEFRVLERLGEGSSK 188 Query: 167 PTAIIGDVADELNLDLVIISMEAIHSKHVDANLLAEFIPCPVLLLPL 213 PTAIIG+VAD+LNLDLV++SMEAIHSKHVDANLLAEFIPCPVLLLPL Sbjct: 189 PTAIIGEVADDLNLDLVVLSMEAIHSKHVDANLLAEFIPCPVLLLPL 235 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs55601 (187 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs4584 (246 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs95282 (221 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs2665 (178 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv55708 174 1e-45 >Vv55708 Length = 453 Score = 174 bits (440), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 79/97 (81%), Positives = 91/97 (93%) Query: 80 SHRGSLKSPWSRRRRKHALLPKQWKTFFTPDGKLSEGGVKFLKKVRSGGVDPSIRAEVWP 139 + RG+LKSPWSRRRRKHALL KQWK+ FTPDGK ++GGVKFLKKVRSGGVDPSIR EVWP Sbjct: 42 TDRGTLKSPWSRRRRKHALLAKQWKSLFTPDGKFTDGGVKFLKKVRSGGVDPSIRVEVWP 101 Query: 140 FLLGVYDLKSSKEERDSVKAEKRKEYENLRKECRIII 176 FLLGVYD+KSS+EERDS++A+KRKEYENLRK+CR I+ Sbjct: 102 FLLGVYDVKSSREERDSIRAQKRKEYENLRKQCRRIL 138 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6097 (324 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs106124 (279 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33029 (229 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs9219 (272 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59938 (130 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64410 (147 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs57459 (207 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs65961 (210 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv41546 391 e-111 >Vv41546 Length = 211 Score = 391 bits (1004), Expect = e-111, Method: Compositional matrix adjust. Identities = 183/210 (87%), Positives = 204/210 (97%) Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60 + SS+SQ EFDYLFKLL+IGDSGVGKS+LLLSFTS+ FE+LSPTIGVDFKVK+V++GGK Sbjct: 2 LPDSSSSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGK 61 Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120 KLKLAIWDTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNLSD+WAKEIDLYSTNQD Sbjct: 62 KLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 121 Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180 CIK+LVGNKVDKESERVVTKKEGI+FAREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TP Sbjct: 122 CIKMLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 181 Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210 SLLAEGS G++KNIFKQKPPE+DA+ SGCC Sbjct: 182 SLLAEGSSGVRKNIFKQKPPESDASTSGCC 211 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67549 (158 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64674 (165 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs89891 (139 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25539 (137 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs26707 (280 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60257 (224 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs80488 (106 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs64873 (170 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv9025 94 1e-21 >Vv9025 Length = 428 Score = 94.4 bits (233), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 8/142 (5%) Query: 15 GQTIIFVRTKNSASALHKALKDFGYEVTTIMGATIQEERDKIVKEFKDGLTQVLISTDVL 74 Q +IFV++ + A+ L+K L + + I QEER K FK+G ++L++TD++ Sbjct: 290 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMPQEERLTRYKGFKEGHKRILVATDLV 349 Query: 75 ARGFDQQQVNLIVNYDPPVKHGKHLEPDCEVYLHRIGRAGRFGRKGVVFNLLMDGDDMII 134 RG D ++VN+++NYD P + YLHR+GRAGRFG KG+ + D + Sbjct: 350 GRGIDIERVNIVINYDMP--------DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDV 401 Query: 135 MEKIERYFDIKVTEVILRVRNS 156 + +++ F++ + E+ ++ S Sbjct: 402 LNQVQERFEVDIKELPEQIDTS 423 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs80386 (279 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2398 115 1e-27 >Vv2398 Length = 226 Score = 115 bits (288), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 54/76 (71%), Positives = 58/76 (76%), Gaps = 1/76 (1%) Query: 91 PRCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPVVTVAGLEQRFCQQCSRFH-LPEFDQGK 149 PRCQ EGC DL+ AK Y+ RHKVC HSK+ V AGL QRFCQQCSRFH L EFD GK Sbjct: 73 PRCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVFAAGLTQRFCQQCSRFHLLSEFDNGK 132 Query: 150 RSCRRRLAGHNERRRK 165 RSCR+RLA HN RRRK Sbjct: 133 RSCRKRLADHNRRRRK 148 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs61049 (292 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs40321 (204 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv23855 290 2e-80 >Vv23855 Length = 191 Score = 290 bits (741), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 150/190 (78%), Positives = 165/190 (86%), Gaps = 4/190 (2%) Query: 9 MEEDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPV 68 MEEDD + D A+F G ++ E ETP HLR+LAAAAQLGDV +LRLALD L+GSIDEPV Sbjct: 1 MEEDD-DNDEAVF---GELIEDEVETPAHLRNLAAAAQLGDVDALRLALDTLNGSIDEPV 56 Query: 69 EDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSAS 128 ED DTALHLTCLYG+LPCVQLLLERGASLEAKDEDGAIPLHDACAGGF EIV+LL+NS + Sbjct: 57 EDGDTALHLTCLYGFLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFTEIVELLMNSTN 116 Query: 129 GTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSELPEPDT 188 TECVKRMLE+VD EGDTPLHHAARGEHV VIRLLLA GASPTK N+YGK PSEL + DT Sbjct: 117 NTECVKRMLESVDVEGDTPLHHAARGEHVGVIRLLLAHGASPTKGNIYGKIPSELADMDT 176 Query: 189 EARRILEVAA 198 EA+RILE AA Sbjct: 177 EAKRILEAAA 186 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs2551 (221 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs63985 (237 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs73170 (240 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv30686 65 9e-13 >Vv30686 Length = 268 Score = 65.5 bits (158), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 17/181 (9%) Query: 36 LHLFCLQSASTDFDLTGQLVWPGAMLMNDYLSKNPD----VLQASSILELGSGVGVTGIL 91 L +F S+ +TG ++W +++ +L D +LQ ++ELGSG G+ G + Sbjct: 65 LSIFQSPSSLGKPGVTGSVMWDSGVVLGKFLEHAVDSGLLLLQGKKVVELGSGCGLVGCI 124 Query: 92 CSRFCREVLLTDHNEEVLKILKKNIEHHTSSENPNSDAGLAVEKLEWGNSDQINKIIQKY 151 + +V LTD + L++LKKN+E + + A V +L WG+ D ++I+ Sbjct: 125 AALLGAQVFLTDLPDR-LRLLKKNVETNLKQGDLRGSA--TVHELTWGD-DPEPELIEPL 180 Query: 152 PGGFDLILGADICFQQSSISPLFDTVEQF------LRLKGRGQCKFILAYVSRAKSMDSM 205 P D +LG+D+ + + +++ L T+ Q + L G + IL Y A D M Sbjct: 181 P---DYVLGSDVIYSEGAVADLLATLMQLCGAQTTIVLAGELRNDSILEYFLEAAMKDFM 237 Query: 206 V 206 V Sbjct: 238 V 238 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs102369 (56 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88495 (241 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs90040 (59 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs53206 (175 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv44727 256 1e-70 >Vv44727 Length = 719 Score = 256 bits (655), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 121/146 (82%), Positives = 131/146 (89%) Query: 1 METLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVE 60 METLLVHKDL G LN+L+VEL++EGV L+GGPRAS LL +PE FHHEYNSM CTVE Sbjct: 548 METLLVHKDLVQTGGLNQLIVELRNEGVTLYGGPRASALLNLPEAHSFHHEYNSMACTVE 607 Query: 61 IVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLG 120 IVDDV +AIDHIH+HGSAHTDCI+AED +VAE FL QVDSAAVFHNASTRFCDGARFGLG Sbjct: 608 IVDDVHSAIDHIHRHGSAHTDCIIAEDLEVAEVFLRQVDSAAVFHNASTRFCDGARFGLG 667 Query: 121 AEVGISTSRIHARGPVGVEGLLTTRW 146 AEVGISTSRIHARGPVGVEGLLTTRW Sbjct: 668 AEVGISTSRIHARGPVGVEGLLTTRW 693 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59910 (135 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv55037 75 3e-16 >Vv55037 Length = 444 Score = 75.5 bits (184), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 54/75 (72%), Gaps = 1/75 (1%) Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66 K+++++EV HN+ W++++G VYD T+FL+DHPGG + +L G D T++F+ + HS Sbjct: 71 KMYSMSEVKKHNSADSTWIVVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HS 129 Query: 67 PSAREMMDQYYVGEI 81 A+++++ Y +GE+ Sbjct: 130 DKAKKLLEDYRIGEL 144 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42822 (333 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv49087 64 4e-12 >Vv49087 Length = 362 Score = 63.9 bits (154), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 72/282 (25%), Positives = 117/282 (41%), Gaps = 45/282 (15%) Query: 40 IRIKVVCTSLCRSDITAWETQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTVF 95 +R KV+ +C SD+ + + + A +P + GHE G+V VG V +F G+ V + Sbjct: 40 VRFKVLYCGICHSDLHSIKNEWGNAAYPMVPGHEIVGVVTEVGSKVEKFKVGDKVGVGCL 99 Query: 96 IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT------------RFSIK-------G 136 +G C +C C D N C L L H +T R+ ++ Sbjct: 100 VGACHSCESCSDDLENYCSKLILTYNMPYHDGTRTYGGYSDTMVAPERYVVRIPDNMPLA 159 Query: 137 LGAAWNVADISKGSTVVIFGLGTVGLS------------VAQGAKARGASRIIGVDTNPE 184 GA A I+ S + FG G+ A+ AKA G ++ + T+P Sbjct: 160 AGAPLLCAGITVYSPLKYFGFTQPGMHIGIVGLGGLGHVAAKFAKAFGV-KVTLISTSPS 218 Query: 185 KCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGW 243 K ++A + G FL D E +Q + G D + + T + L + Sbjct: 219 KKKEAIEHLGADSFLVSRD-PEQMQAAM-----GTMDGILDTVSATHPLLPLLGLLKNN- 271 Query: 244 GLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDL 285 G + LGVP+ E+ A + L + +T+ GS GG K ++ Sbjct: 272 GKLILLGVPEKPLELPA-FSLIMGRKTVAGSGIGGMKETQEM 312 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs9226 (217 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs48454 (244 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv6626 126 3e-31 >Vv6626 Length = 210 Score = 126 bits (317), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 67/154 (43%), Positives = 106/154 (68%), Gaps = 7/154 (4%) Query: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60 M RG++Q++RIEN +RQVTFSKRR+GLLKKA+E+SVLCDAEVA+I+FS KG+L+E+S+ Sbjct: 1 MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS- 59 Query: 61 SCMERILERYERYCYAERQLQANEIEPN---GNWTLEYSKLKARMEVLQRNQKHFMGEDL 117 S M+ +ERY + +Q++ N E N + + ++E+L+ +Q+ +G+ L Sbjct: 60 SNMQSAIERYREHA---KQVETNNPELEQYMQNLKQDAESMAKKIELLEVSQRKLLGQGL 116 Query: 118 ADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 151 + SL E+ ++ Q++ LK IR+RK Q+ + I Sbjct: 117 SSCSLDEILEIDSQLEKSLKSIRARKAQIFQEQI 150 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6589 (249 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs105359 (154 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs74879 (127 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv14589 75 6e-16 >Vv14589 Length = 94 Score = 74.7 bits (182), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 42/71 (59%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Query: 57 AMKVTRSIMIVKPPGYQSGSPPVSPAGSTPPVSPXXXXXXXXXXXXXXXXXXXYEKRNEV 116 M+VTRSIMI+KPPG+Q+GSPPVSPAGSTPPVSP YEK N V Sbjct: 25 GMRVTRSIMIIKPPGFQNGSPPVSPAGSTPPVSP-FSGGKESFRFRRRSTSDAYEKGNGV 83 Query: 117 GLRSPTTPYDV 127 G RSP PYDV Sbjct: 84 GPRSPRPPYDV 94 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs83508 (269 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv6184 63 6e-12 >Vv6184 Length = 257 Score = 62.8 bits (151), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 20/218 (9%) Query: 50 LSKYKIQT------KNNSPAAQEKCITRLLLYHFGVNLPVMIFSYPVFKYMGMQSSLPLP 103 L Y++ T KN+ P A + + +L V V + + G ++ P Sbjct: 35 LDNYRLHTRKEEDEKNSVPLA---SVVKGVLLQQLVQATVAHLLFVLTSKTGSSGTVIHP 91 Query: 104 SWKVVLSQIIFYFILEDFVFYWGHRILH-TKWLYKHVHSVHHEYATPFGLTSEYAHPAEI 162 S V + QII ++ D Y+ HR +H K+LY+HVHS HH+ P+ + + Y HP E Sbjct: 92 SIAVQIVQIIIGMLVMDTWQYFVHRYMHQNKFLYRHVHSQHHKLVVPYAIGALYNHPLEG 151 Query: 163 LFLGFATIVGPAI----TGPHLMTLWLWMVLRVLETVEAHCGYHFPWSLSNFIPLYGGAD 218 L L VG AI +G T ++ V++TV+ HCG P ++ + + Sbjct: 152 LLL---DTVGGAISFLVSGMTARTAVIFFCFAVIKTVDDHCGLWLPGNIFHLL-FQNNTA 207 Query: 219 FHDYHHRLLYTKSGNYSSTFVYM-DWIFGTDKGYRKLK 255 +HD HH+ K NYS F + D + GT Y+ ++ Sbjct: 208 YHDIHHQRQGLKY-NYSQPFFPIWDKLLGTHMPYKLVR 244 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs79201 (266 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67260 (229 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv26175 352 3e-99 >Vv26175 Length = 300 Score = 352 bits (903), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 172/219 (78%), Positives = 194/219 (88%), Gaps = 2/219 (0%) Query: 7 RKVIVAAERLSTDHNVGVEEVRKEVEALHPDDSHIVVYARGVWRIKGIIQVSRSIGDVYL 66 RK V AERLSTDHNV VEEVR+EVEAL+PDDSH+VVY RGVWRIKGIIQVSRSIGDVYL Sbjct: 82 RKNPVVAERLSTDHNVSVEEVRREVEALNPDDSHVVVYTRGVWRIKGIIQVSRSIGDVYL 141 Query: 67 KKPDFYRDPVFQQFGNPIPLKRPAMTAEPSILIRKLRPQDLFLIFASDGLWEQLTDEAAV 126 KKP+F RDP+FQQFGNP+PLKRP MTAEPSILIRKL PQD FLIFASDGLWEQL+DEAAV Sbjct: 142 KKPEFNRDPIFQQFGNPVPLKRPVMTAEPSILIRKLLPQDSFLIFASDGLWEQLSDEAAV 201 Query: 127 EIVCKNPRAGIAKRLVRAALQEAARKREVGYKEIKKLKRGIRRHFHDDITVIVIYLDHHQ 186 EIV KNPRAGIAKRLVRAAL EAA+KRE+ Y++IK++++GIRRHFHDDITVIVIYLDHH Sbjct: 202 EIVFKNPRAGIAKRLVRAALHEAAKKREMSYQDIKRIEKGIRRHFHDDITVIVIYLDHH- 260 Query: 187 KGSSNSRSKHNAI-GCTSAPVDIFSLNADEAEDDVQHML 224 KGS+N R KH+ + G T+AP DIFSL A E ++D+ H Sbjct: 261 KGSTNRRPKHSTVNGTTNAPTDIFSLKAHEGDEDLLHTF 299 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60106184 (168 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3449 145 3e-37 >Vv3449 Length = 162 Score = 145 bits (367), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 70/85 (82%), Positives = 76/85 (89%) Query: 1 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEK 60 MAS ++E+RCFVGGLAWAT D SL AF +G+ILESKIINDRETGRSRGFGFVTF E+ Sbjct: 1 MASAEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQ 60 Query: 61 SMRDAIEGMNGQNLDGRNITVNEAQ 85 SMRDAIEGMNGQNLDGRNITVNEAQ Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQ 85 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs36042 (175 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv32041 111 1e-26 >Vv32041 Length = 333 Score = 111 bits (277), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 87/157 (55%), Gaps = 24/157 (15%) Query: 4 LPPGYRFFPTEEELVSFYLINKLE------ELCGE-------------KCQGDTEQWFFF 44 LPPG+RF+PT+EEL+ YL K+ E+ GE K ++W+FF Sbjct: 14 LPPGFRFYPTDEELLVQYLCRKVAGQGFSLEIIGEIDLYKFDPWVLPSKAIFGEKEWYFF 73 Query: 45 TPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKW 104 +PR P+R SGYWKATG+ V +++ R +G+KK +VFY GKAP G KT W Sbjct: 74 SPRDRKYPNGSRPNRVAGSGYWKATGT-DKVITTEGRKVGIKKALVFYIGKAPKGTKTNW 132 Query: 105 KMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVKSES 141 MHEYR +E + + + ++ LCRIY K+ + Sbjct: 133 IMHEYRLLENSRKNGSSKL----DDWVLCRIYKKNSN 165 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs2411 (246 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs56910 (96 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs38492 (284 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60524 (210 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7608 (268 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs23153 (99 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs27421 (478 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs22061 (228 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs12987 (204 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2430 285 4e-79 >Vv2430 Length = 265 Score = 285 bits (729), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 139/203 (68%), Positives = 158/203 (77%) Query: 2 PLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYA 61 PLTGVVF+PFEEVKKE +R KY ++CE+AINEQINVEYNVSY YHA+YA Sbjct: 62 PLTGVVFEPFEEVKKELLLVPTVPQESLSRHKYTNDCESAINEQINVEYNVSYAYHAMYA 121 Query: 62 YFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGD 121 YFDRDN+AL+GL MEYQN RGGKVKL SI+ P SEFDH EKGD Sbjct: 122 YFDRDNVALKGLANFFKESSLEEREHAEKLMEYQNKRGGKVKLQSILMPHSEFDHPEKGD 181 Query: 122 ALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQL 181 AL+AMELALSLEKLTNEKLL LHS+ADR+NDPQ+A+F+ESEFL EQVEAI KI++YV+QL Sbjct: 182 ALHAMELALSLEKLTNEKLLHLHSIADRSNDPQLADFIESEFLIEQVEAIKKISEYVAQL 241 Query: 182 RMVGKGHGVWHFDQMLLHEGDAA 204 R VGKGHGVWHFDQMLL+ G A Sbjct: 242 RRVGKGHGVWHFDQMLLNGGVVA 264 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11106190 (174 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv52609 262 3e-72 >Vv52609 Length = 178 Score = 262 bits (669), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 125/151 (82%), Positives = 137/151 (90%), Gaps = 4/151 (2%) Query: 14 HESG-EQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 72 HESG +QSPR NVREQDRYLPIANISRIMKKALPANGKIAKDAK+TVQECVSEFISFITS Sbjct: 13 HESGGDQSPRHNVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITS 72 Query: 73 EASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGNAKGGDASA 132 EASDKCQ+EKRKTINGDDLLWAMATLGFEDYI+PLK+YL RYRE+EGDT+G+A+GGD SA Sbjct: 73 EASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLQRYRELEGDTRGSARGGDGSA 132 Query: 133 KKDG---QPNPNTQLAHQGSFPQGVNYGNSQ 160 ++D QP PN Q AHQGSF Q +NY NSQ Sbjct: 133 RRDAIGSQPGPNAQFAHQGSFTQAMNYMNSQ 163 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs167106186 (165 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs9195 (211 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv40998 235 6e-64 >Vv40998 Length = 212 Score = 235 bits (599), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 112/198 (56%), Positives = 149/198 (75%), Gaps = 1/198 (0%) Query: 9 PLTKISESFKELAATVNS-QAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVTKVDD 67 PL ++E+F+EL+ V + + + L F ACS VS LFGCLGIAFKFAE++YV+K+ D Sbjct: 15 PLAAMAEAFEELSKLVKTCPSYHLRLITFCDACSLVSVLFGCLGIAFKFAELEYVSKIRD 74 Query: 68 LAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLK 127 L EASK+ TL+ +IDRDIE N VR AGSH+RNL RV++GLD++R LFEQ L ++ SL+ Sbjct: 75 LLEASKTYDTLEDIIDRDIENNTVRSAGSHSRNLRRVRQGLDLIRALFEQFLLSDDFSLR 134 Query: 128 DPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDETSARIQMQDYITTSAP 187 + AS AY+QV AP+H WA+R AV+AGMYALP R QLL +LNE+ SA QM+ YI S P Sbjct: 135 EAASAAYSQVCAPYHTWAVRTAVSAGMYALPVREQLLVRLNENGQSAEKQMRRYINASLP 194 Query: 188 VILYIDKLFLSRELGIDW 205 VI YID+L+++R + +DW Sbjct: 195 VIAYIDELYMARNISLDW 212 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs45048 (121 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33047 (275 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs61068 (233 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs105406 (148 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv19744 226 2e-61 >Vv19744 Length = 229 Score = 226 bits (575), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 111/148 (75%), Positives = 124/148 (83%) Query: 1 MVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAG 60 M+LMDKLGRKALL WSFF MAV+M++QVA +SS+I GS +++LSV GML+FVLTFALGAG Sbjct: 82 MILMDKLGRKALLVWSFFGMAVAMSVQVAGASSFISGSGAVFLSVSGMLLFVLTFALGAG 141 Query: 61 PVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGXXXXXXXXXXXXXXXYSIFGTFCLM 120 PVP LLLPEIFP+RIRAKAMAVCMSVHWVINFFVG YS+F TFCLM Sbjct: 142 PVPGLLLPEIFPNRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSMFCTFCLM 201 Query: 121 AVAFVKRNVVETKGKSLQEIEIALLPQE 148 AV FVKRNVVETKG+SLQEIEIALLPQE Sbjct: 202 AVVFVKRNVVETKGRSLQEIEIALLPQE 229 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44142 (180 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv41361 76 5e-16 >Vv41361 Length = 161 Score = 75.9 bits (185), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 35/62 (56%), Positives = 44/62 (70%) Query: 1 MISARDLLIIWSSTSAYWRWISIPEARFPEVAELIRVCWLEIRGKISTRSLSPGTLYTAY 60 M+SAR+L I WSS + YW W + ++RF E EL +CWLEI+GKIST LSP T Y AY Sbjct: 100 MLSARNLSITWSSNTLYWSWKPLLQSRFAETVELRTICWLEIQGKISTSVLSPKTTYRAY 159 Query: 61 LV 62 L+ Sbjct: 160 LI 161 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs34035 (460 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs50758 (335 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs71808 (264 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv12866259 488 e-140 >Vv12866259 Length = 264 Score = 488 bits (1255), Expect = e-140, Method: Compositional matrix adjust. Identities = 241/265 (90%), Positives = 250/265 (94%), Gaps = 2/265 (0%) Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGP 59 MA S MALSS SF G V L P+ +++ GGR+SMRKTG K+ SGSPWYGPDRV YLGP Sbjct: 1 MAASIMALSSPSFAGTTVKLGPNASDILGGGRVSMRKTGFKA-PSGSPWYGPDRVLYLGP 59 Query: 60 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119 LSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL+R Sbjct: 60 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSR 119 Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP 179 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGP Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGP 179 Query: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE Sbjct: 180 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239 Query: 240 NLADHLADPVNNNAWAYATNFVPGK 264 NLADHLADPVNNNAWAYATNFVPGK Sbjct: 240 NLADHLADPVNNNAWAYATNFVPGK 264 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs74474 (137 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs6581 (177 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv20403 75 7e-16 >Vv20403 Length = 179 Score = 75.1 bits (183), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 5/78 (6%) Query: 95 PFGRYSGPNTQSRVL-PSVGAFTVQCADCFKWRLIPTKEKYEEIREHVLENPFTCEKARE 153 P + G +S ++ S+GA+ VQC C KWRLI T+E+YEEIR +E PF C K Sbjct: 3 PMEKTKGKKRKSALVRSSIGAYAVQCEACLKWRLIDTEEEYEEIRSRFIEEPFVCSK--- 59 Query: 154 WRPDVSCDDPPDISQDGS 171 + DVSC+DP DI D + Sbjct: 60 -KADVSCEDPTDIEYDAT 76 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs98448 (294 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs11855 (225 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs48198 (223 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs54151 (64 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs59108 (60 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33591 (50 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs92485 (241 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs67731 (187 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88106183 (285 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88423 (226 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs102311 (248 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs103446 (343 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52432 (359 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88680 (213 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3302 157 1e-40 >Vv3302 Length = 652 Score = 157 bits (397), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 78/158 (49%), Positives = 104/158 (65%), Gaps = 5/158 (3%) Query: 60 IGIDLGTTNSCVALMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTN 119 IGIDLGTT SCV + + ++I N +G+RTTPS VAF E L+G AK Q NP N Sbjct: 10 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPIN 68 Query: 120 TLFGTKRLIGRKFDDPQTQKEMQMVSYKIVRAPNGDAWVEAN----GQQYSPSQIGAFVL 175 T+F KRLIGR+F D Q ++++ +K++ P + N +Q+S +I + VL Sbjct: 69 TVFDAKRLIGRRFSDSSVQSDIKLWPFKVIAGPGDKPMIVVNYRGEEKQFSAEEISSMVL 128 Query: 176 TKMKETAESYLGKSVSKAVITVPAYFNDAQRQATKDAG 213 KM+E AE+YLG S+ AV+TVPAYFND+QRQATKDAG Sbjct: 129 IKMREIAEAYLGTSIKNAVVTVPAYFNDSQRQATKDAG 166 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs72584 (300 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs84053 (219 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44556 (185 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs20787 (148 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs75266 (81 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs71525 (310 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv17848 271 1e-74 >Vv17848 Length = 307 Score = 271 bits (692), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 169/313 (53%), Positives = 183/313 (58%), Gaps = 11/313 (3%) Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60 MPRYDDRYG TRLYVGRL+SRT +RDLE +FSRYGR+RDVDMK DFAFVEFSDPRDADDA Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTCTRDLESLFSRYGRVRDVDMKHDFAFVEFSDPRDADDA 60 Query: 61 RYSLNGRDVDGSRIIVEFAX-XXXXXXXXSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 119 RY+LNGRD DGSRIIVEFA SREYLGRGPPPGSGRCFNCGIDGHWARDCKA Sbjct: 61 RYNLNGRDFDGSRIIVEFAKGGPRGGSGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 120 Query: 120 GDWKNKCYRCGERGHIERNCQNSPKKLXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXX 177 GDWKNKCYRCGERGHIERNCQNSP+KL Sbjct: 121 GDWKNKCYRCGERGHIERNCQNSPRKLSRHGRSYSRSPVRSRHGRSRSQSYSPSRSYSRS 180 Query: 178 XXXVKRDRSVERFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDERSPQDQRSPSPRD 237 KRDRS+ER + D R PQ++ SP+ Sbjct: 181 RSPPKRDRSIER-DKRSGSPRYRSPEPKRRSTPTSKPRKRSPTPEDSR-PQERISPNVYK 238 Query: 238 RRQANGSEYSGSPRGKSRSPV-DDAEGPEDRNYRSPPEENGXXXXXXXXXXXXXXXXXXX 296 R Q EYS SPR KSRSPV + + P R YRSP + NG Sbjct: 239 REQP---EYSQSPREKSRSPVSSERDSPVARRYRSPSDANG--RSRSQSPRDERSPLDED 293 Query: 297 XXXNHGDPRGSES 309 N G PRGSES Sbjct: 294 EDNNSGSPRGSES 306 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs52623 (281 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25932 (141 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41118 (154 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs66150 (305 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv29266 325 6e-91 >Vv29266 Length = 341 Score = 325 bits (833), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 155/261 (59%), Positives = 193/261 (73%) Query: 23 FVLEGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCD 82 F+L GSPS QLSP++Y TCPN + + V+++AF SD+RIGASLIRLHFHDCFV+GCD Sbjct: 14 FLLGGSPSYGQLSPTYYDDTCPNASSIVRGVIQEAFISDVRIGASLIRLHFHDCFVNGCD 73 Query: 83 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVA 142 S+LLD+T TI SEK A PN NS RGFEV+D++K A+E +CP +VSCADIL IAAE SV Sbjct: 74 GSLLLDNTETIVSEKDAIPNANSTRGFEVVDSIKTALESSCPGIVSCADILAIAAEASVC 133 Query: 143 LSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAH 202 +SGGPSW V LGRRDSR AN++ AN LP P + LK+ F VGLN DLVALSGAH Sbjct: 134 MSGGPSWTVLLGRRDSRIANQSGANTALPNPRQNITTLKAVFEAVGLNTTTDLVALSGAH 193 Query: 203 TFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFD 262 TFGR C+FF R+Y+F+ T PDP+L++++L+ L LCPQ G+G VLAN D TTPD FD Sbjct: 194 TFGRGACRFFSDRIYNFSGTESPDPSLNSSYLETLSALCPQDGDGTVLANLDPTTPDGFD 253 Query: 263 NKYFSNLRGRKAFCRVIKSCF 283 YFSNL+ + + + F Sbjct: 254 KNYFSNLQENRGLLQSDQELF 274 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs94106186 (70 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs62778 (252 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv29224 366 e-103 >Vv29224 Length = 253 Score = 366 bits (939), Expect = e-103, Method: Compositional matrix adjust. Identities = 165/253 (65%), Positives = 212/253 (83%), Gaps = 1/253 (0%) Query: 1 MTSIIDDIYDVYGKIEELELFTSAIERWDINAIDQLPEYMKLCYRALINVYSEVEKDLVS 60 MTSIIDDIYD YG +EELELFT A+ERWD++AIDQLPEYM++CY+AL+ VYSE+E+++ Sbjct: 1 MTSIIDDIYDAYGTLEELELFTEAVERWDVSAIDQLPEYMRVCYQALLYVYSEIEEEMAK 60 Query: 61 QGKLSRLHYAKEAMKNQVKHYFFEAKWYHQNYVPTVDEYMTVALISSAHPNLSTISFVGM 120 +G+ RL+YAKEAMKNQV+ Y+ EAKW +PT++EYM VAL++SA+ L+T SFVGM Sbjct: 61 EGRSYRLYYAKEAMKNQVRAYYEEAKWLQVQQIPTMEEYMAVALVTSAYSMLATTSFVGM 120 Query: 121 GDIVTKESFEWLFSNPRSIRASCAVGRLMNDMVSHKFEQSRGHVASSVECYINQYGATEE 180 GD VTKE+F+W+FS P+ +RAS V RLM+DMVSHKFEQ RGHVAS+VECY+ Q+GA+E+ Sbjct: 121 GDAVTKETFDWIFSEPKIVRASAIVCRLMDDMVSHKFEQKRGHVASAVECYMKQHGASEQ 180 Query: 181 EAYSEFRKQVSNAWKDINEECLRPTLVPVPLLMRILNLTRAADVVYKYKDGYTDTEE-LK 239 E ++EF KQV +AWKDINEECL PT VP+P+LMR+LNL R DV+YK +DGYT + LK Sbjct: 181 ETHNEFNKQVRDAWKDINEECLIPTAVPMPILMRVLNLARVIDVIYKNEDGYTHSGTVLK 240 Query: 240 DFIASLLINPVPI 252 DF+ S+LI+PVPI Sbjct: 241 DFVTSMLIDPVPI 253 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs21926 (123 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs63894 (219 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs90106184 (303 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs36106190 (283 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv3467 337 2e-94 >Vv3467 Length = 229 Score = 337 bits (863), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 163/227 (71%), Positives = 185/227 (81%), Gaps = 1/227 (0%) Query: 48 VATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVT 107 +AT LFLY+++ TV+G KK C VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVT Sbjct: 1 MATFLFLYITILTVMGVKKSPTMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVT 60 Query: 108 FGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFM-KHEYNSLGGGANTVASGYNKGSA 166 FGL LARK+SL RA+ Y++ QCLGAICG G+VK F Y LGGGAN V SGY KG Sbjct: 61 FGLLLARKLSLTRAIFYIIMQCLGAICGAGVVKGFEGSQSYEVLGGGANVVNSGYTKGDG 120 Query: 167 LGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 226 LGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPA Sbjct: 121 LGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 180 Query: 227 RSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 273 RS GAA+I+N + AWDD WIFWVGPF+GA AA Y Q ++RA K+ Sbjct: 181 RSLGAAIIFNREHAWDDMWIFWVGPFIGAALAAMYQQIVIRAIPFKS 227 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs91615 (232 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs50247 (232 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs40516 (113 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs34089 (235 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs25451 (247 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs32845 (185 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs50500 (163 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs93945 (201 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs55022 (368 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs82297 (176 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88814 (211 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv866 181 1e-47 >Vv866 Length = 218 Score = 181 bits (458), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 103/187 (55%), Positives = 128/187 (68%), Gaps = 10/187 (5%) Query: 28 NNVGPMDLEQNPGAAVNSSAVEVKKNGNDSKTAVTITAVSPVSG---DADLVTDTQKKIR 84 N P+ NP + V+S K ++SK + A PV+ + V+D QKKIR Sbjct: 39 NTTIPLSPTDNPVSNVSS------KEPDESKVGGSAGAADPVASSPTNTATVSDIQKKIR 92 Query: 85 RAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSVS 144 RAERFGMPVQ+SEEEKRN+RAERFGTG GS+ SK SEELKRKARAERFGLP+ S+ + Sbjct: 93 RAERFGMPVQLSEEEKRNSRAERFGTGPTVHGSDGSKKSEELKRKARAERFGLPLDSAPT 152 Query: 145 EEEAKRKARLARFAPYPKTDSVEEDKRKARALRFXXXXXXXXXQVNGKGNIEVEAKAAIT 204 +EE+K+KARLARFA KTD++EEDK+KARA+RF QVNGKG ++E K AI Sbjct: 153 DEESKKKARLARFASVSKTDTLEEDKKKARAIRFSNPPSDSLSQVNGKGE-DIEPKTAIA 211 Query: 205 GEADGVA 211 G+A G A Sbjct: 212 GKASGGA 218 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs51862 (153 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs85106183 (168 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs1778 (138 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs51158 (324 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs55091 (151 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs15084 (178 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv37379 162 3e-42 >Vv37379 Length = 504 Score = 162 bits (411), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 84/180 (46%), Positives = 114/180 (63%), Gaps = 6/180 (3%) Query: 4 INILDIYAPLCXXXXXX---XXVLP-FDPCSEIYVHSYLNSPQVQKSLHANVTGIRGPWQ 59 I+I +IYAPLC V P FDPCS+ YV++YLN VQK+LHANVT ++ W+ Sbjct: 324 IDIYNIYAPLCFNTNLTVKPKKVTPEFDPCSDYYVYAYLNRADVQKALHANVTKLKYDWE 383 Query: 60 DCSDTVLRHWKDSPLTVLPSIQELMTSGISVYIYSGDTDGTVPTISIRYSINKLGAKVKT 119 CSD V+++W DSP T++P + E M +G+ V+++SGDTDG VP S SI+ + VKT Sbjct: 384 PCSD-VIQNWTDSPSTIIPLLHEFMENGLRVWVFSGDTDGRVPVTSTMASIDTMKLSVKT 442 Query: 120 AWYPCYIQGEXXXXXXXXQ-NLTFVTIRGAGHMVPSSQPARALAFFSSFLDGKLPPAAKS 178 W+P ++ GE + +LTF T+RGAGH VPS +P RAL+ S FL G P S Sbjct: 443 PWHPWFVAGEVGGYTEVYKGDLTFATVRGAGHQVPSFRPKRALSLISHFLSGTPLPRRSS 502 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42420 (250 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv25966261 391 e-111 >Vv25966261 Length = 250 Score = 391 bits (1005), Expect = e-111, Method: Compositional matrix adjust. Identities = 199/250 (79%), Positives = 212/250 (84%) Query: 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTM 60 M K+YPTVSE+YKKAVEK K+KLRG IAEKNCAP+MLRIAWHSAGT+DVKT+TGGPFGTM Sbjct: 1 MGKSYPTVSEEYKKAVEKAKKKLRGLIAEKNCAPIMLRIAWHSAGTFDVKTRTGGPFGTM 60 Query: 61 RLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRD 120 + E AH ANNGLDIAVRLLEP KEQFP ISYAD YQLAGVV VEVTGGP+IPFHPGR+ Sbjct: 61 KKPEELAHGANNGLDIAVRLLEPIKEQFPIISYADFYQLAGVVAVEVTGGPEIPFHPGRE 120 Query: 121 DKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWT 180 DK EPP EGRLPDA +G DHLRQVF QMGLSDKDIVALSG HTLGRCHKERSGFEGPWT Sbjct: 121 DKPEPPPEGRLPDATKGCDHLRQVFVTQMGLSDKDIVALSGAHTLGRCHKERSGFEGPWT 180 Query: 181 RNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHL 240 NPLIFDNSYF ELL+GEK+GLLQLPSDKALL DP FRPLVEK HL Sbjct: 181 SNPLIFDNSYFKELLSGEKEGLLQLPSDKALLSDPAFRPLVEKYAADEDAFFEDYKEAHL 240 Query: 241 KLSELGFAEA 250 KLSELGFA+A Sbjct: 241 KLSELGFADA 250 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs98970 (267 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv44223 287 1e-79 >Vv44223 Length = 263 Score = 287 bits (735), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 138/260 (53%), Positives = 185/260 (71%), Gaps = 7/260 (2%) Query: 9 GKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRG 68 G G SLN+ LRKEL+LYA++ C++LPG TR+ +V+++ IRENTEGEYSGLEH+VV G Sbjct: 1 GGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHQNVDIVVIRENTEGEYSGLEHEVVPG 60 Query: 69 VVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYP 128 VVESLK+IT+ S R+A+YAF YA + R++V+A+HKANIM+ DGLFL+ CREVA KYP Sbjct: 61 VVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYP 120 Query: 129 EITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI 188 I Y E+++DNCCM LV P FDV+V PNLYG+++++ AG+ GG G+ P N+G Sbjct: 121 GIKYSEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHA 180 Query: 189 ALAEAVHGSAPDIAGKNL-----ANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEG 243 + SA ++ + L ANP ALLLSS MLRHL+ ADR++ A+ I+EG Sbjct: 181 VFEQG--ASAGNVGHQKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEG 238 Query: 244 KYRTADLGGSSTTSDFTKAI 263 KYRT DLGG S+T + A+ Sbjct: 239 KYRTKDLGGDSSTQEIVDAV 258 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs19106181 (303 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs13890 (225 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv26640 172 5e-45 >Vv26640 Length = 292 Score = 172 bits (436), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 122/212 (57%), Gaps = 6/212 (2%) Query: 1 LGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXXWANNVIWHQGNLLSSDSWKEALDG 60 LGGNGFVGS IC+ A+ +G+ V W + V W G++ + W E L G Sbjct: 64 LGGNGFVGSAICKAAVSKGIEVTSLSRSGRPSQSSSWVDQVNWVTGDVFYVN-WDEVLVG 122 Query: 61 VTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQ-GYY 119 TAV+S +GGFGS M +ING AN+ A+ AA + GV +F+ IS D+ + +LL GY+ Sbjct: 123 ATAVVSTLGGFGSEEQMKRINGEANVLAVGAAKDYGVPKFILISVHDYNLPQFLLDSGYF 182 Query: 120 EGKRAAETELLTRYPYGGVILRPGFIYGTRTVGGMKLPLGVIGSPMEMVLQH----AKPL 175 GKR AE+E+L++YP GV+LRPGFIYG R V G ++PL +IG P+E +L+ +PL Sbjct: 183 TGKRKAESEVLSKYPNSGVVLRPGFIYGKRRVDGFEIPLDLIGEPLEKILRATENLTRPL 242 Query: 176 SQLPLVGPLFTPPXXXXXXXXXXXXXXTDPVF 207 S LP + PP TD F Sbjct: 243 SALPASDLILAPPVSVDDVALAAVNAITDDDF 274 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7831 (138 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv65342 230 6e-63 >Vv65342 Length = 482 Score = 230 bits (587), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 109/128 (85%), Positives = 120/128 (93%) Query: 1 MENALRAFCKGIKIGKILIHREGDNGQQLIYEKLPQDISERHVLLLDPILGTGNSAVQAI 60 MENALRA CKGIKIGKILIHR+GDNG+QLIYEKLP+DISERHVLLLDP+L TGNSA QAI Sbjct: 355 MENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSAGQAI 414 Query: 61 SLLLRKGVPESNIIFLNLISAPQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFG 120 LL++KGVPES+IIFLNLISAP+G+H VCK FP LKIVTSEID+ LNE+FRVIPGMGEFG Sbjct: 415 ELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGMGEFG 474 Query: 121 DRYFGTDD 128 DRYFGTDD Sbjct: 475 DRYFGTDD 482 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs41454 (210 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33967 (217 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs83105 (220 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs10070 (130 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs44579 (164 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs65208 (95 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs21394 (98 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs38569 (213 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs7342 (270 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs96097 (136 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs36486 (413 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs20766 (390 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs42230 (227 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs15150 (57 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs89951 (253 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs101256 (284 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv30250 439 e-125 >Vv30250 Length = 404 Score = 439 bits (1128), Expect = e-125, Method: Compositional matrix adjust. Identities = 215/269 (79%), Positives = 233/269 (86%), Gaps = 1/269 (0%) Query: 1 PRVRPRVRGFSEFSGLRNS-ASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKL 59 P ++ +GF+EFSGLRNS A L F RK+SDDF SV+A QTSA+GS+S GYRK +AKL Sbjct: 11 PSLQANGKGFAEFSGLRNSSACLSFNRKTSDDFLSVVAFQTSAVGSNSGGYRKGVTEAKL 70 Query: 60 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPV 119 KVAINGFGRIGRNFLRCWHGRKDSPL+V+ +NDTGGVKQASHLLKYDS LG FEADVK V Sbjct: 71 KVAINGFGRIGRNFLRCWHGRKDSPLDVIVVNDTGGVKQASHLLKYDSILGTFEADVKAV 130 Query: 120 GTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 179 G D ISVDGKVI++VS+RNP++LPWGDL IDLVIEGTGVFVDR+GAGKHIQAGAKKVLIT Sbjct: 131 GDDAISVDGKVIKIVSSRNPLDLPWGDLDIDLVIEGTGVFVDRDGAGKHIQAGAKKVLIT 190 Query: 180 APGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGNMTTTHSY 239 APGKGDIPTYVVGVNAD Y DEPIISNASCTTNCLAPFVKVLDQKFGIIKG MTTTHSY Sbjct: 191 APGKGDIPTYVVGVNADEYNHDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSY 250 Query: 240 TGDQRLLDASHXXXXXXXXXXXNIVPTST 268 TGDQRLLDASH NIVPTST Sbjct: 251 TGDQRLLDASHRDLRRARAAALNIVPTST 279 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs33726 (316 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs104903 (264 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv60795 143 3e-36 >Vv60795 Length = 140 Score = 143 bits (360), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 67/95 (70%), Positives = 80/95 (84%) Query: 72 RNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR 131 R SPP R+DD++GHY+F LGENLT RYKI SKMGEGTFG+VLECWDR+ +E VAIK+VR Sbjct: 46 RRQSPPRRDDDREGHYVFGLGENLTPRYKILSKMGEGTFGRVLECWDRDTREYVAIKVVR 105 Query: 132 GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW 166 I KYR+AAM+EI VLQQL K+DK RCVQI++W Sbjct: 106 SISKYRDAAMVEIGVLQQLVKNDKCRLRCVQIQHW 140 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs3937 (332 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs48558 (186 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs60186 (54 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs88787 (354 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2632 166 8e-43 >Vv2632 Length = 397 Score = 166 bits (419), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 160/306 (52%), Gaps = 33/306 (10%) Query: 42 KSLVAGGVAGAVSRTAVAPLERLKILLQV-QNPHSIKYNGTIQGLKYIWRTEGFRGLFKG 100 + L++G +AGAVSRTAVAPLE ++ L V + HS T + I +T+G++GLF+G Sbjct: 117 RRLISGAIAGAVSRTAVAPLETIRTHLMVGSSGHS-----TTEVFNNIMKTDGWKGLFRG 171 Query: 101 NGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSA 160 N N R+ P+ A++ F+Y+ +K + E ++ L AGACAG+ + Sbjct: 172 NLVNVIRVAPSKAIELFAYDTVNKNL-----SPIPGEQPKIPIPASLVAGACAGVSSTLV 226 Query: 161 TYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNF 220 TYP+++++ RLT+Q + Y G+F A +L+E GP LYRG PS+IGVVPY N+ Sbjct: 227 TYPLELLKTRLTIQGD----VYNGLFDAFVKILQEGGPAELYRGLTPSLIGVVPYAATNY 282 Query: 221 AVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWK 280 Y++L+ K + + ++ L +PL+V R+ MQ VG Sbjct: 283 FAYDTLRKTYRK-----ILKQEKIGNIETLLIGSLAGAISSSATFPLEVARKHMQ-VGAL 336 Query: 281 EASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYE 340 V Y ++ A + EG LYKGL P+ +K+VP+ ++F+ YE Sbjct: 337 SGRQV------------YKNVLHALSSILEQEGIPGLYKGLGPSCLKLVPAAGISFMCYE 384 Query: 341 VVKDIL 346 K IL Sbjct: 385 ACKRIL 390 Score = 97.1 bits (240), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 11/198 (5%) Query: 38 LSICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGL 97 + I SLVAG AG S PLE LK L +Q YNG I + G L Sbjct: 207 IPIPASLVAGACAGVSSTLVTYPLELLKTRLTIQGD---VYNGLFDAFVKILQEGGPAEL 263 Query: 98 FKGNGTNCARIVPNSAVKFFSYEQASKGIL-YLYQHHTGNEDAELTPLLRLGAGACAGII 156 ++G + +VP +A +F+Y+ K L Q GN + L G+ AG I Sbjct: 264 YRGLTPSLIGVVPYAATNYFAYDTLRKTYRKILKQEKIGNIETLLI-------GSLAGAI 316 Query: 157 AMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYV 216 + SAT+P+++ R + V Y+ + HALS++L +EG LY+G PS + +VP Sbjct: 317 SSSATFPLEVARKHMQVGALSGRQVYKNVLHALSSILEQEGIPGLYKGLGPSCLKLVPAA 376 Query: 217 GLNFAVYESLKVWLIKTK 234 G++F YE+ K L++ + Sbjct: 377 GISFMCYEACKRILVENE 394 Score = 66.6 bits (161), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 26/200 (13%) Query: 144 LLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYR 203 L RL +GA AG ++ +A P++ +R L V + S + +F+ +++ +G + L+R Sbjct: 116 LRRLISGAIAGAVSRTAVAPLETIRTHLMVGS--SGHSTTEVFN---NIMKTDGWKGLFR 170 Query: 204 GWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXX 263 G +VI V P + Y+++ L E ++ + L Sbjct: 171 GNLVNVIRVAPSKAIELFAYDTVNKNLSPIP----GEQPKIPIPASLVAGACAGVSSTLV 226 Query: 264 XYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVP 323 YPL++++ R+ + GD YNG+ DAF K ++ G LY+GL P Sbjct: 227 TYPLELLKTRL----------TIQGD-------VYNGLFDAFVKILQEGGPAELYRGLTP 269 Query: 324 NSVKVVPSISLAFVTYEVVK 343 + + VVP + + Y+ ++ Sbjct: 270 SLIGVVPYAATNYFAYDTLR 289 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs79931 (132 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs50927 (147 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv2896 96 2e-22 >Vv2896 Length = 171 Score = 96.3 bits (238), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 40/83 (48%), Positives = 55/83 (66%) Query: 64 VQNVWDSSEDRLGLIGLGFAGIVALWASVNLITAIDKLPIIPNALELIGILFSTWFVYRY 123 VQ WD ED+ + L AG V LW S +++AIDKLP++P LE++GI +S WF Y+ Sbjct: 87 VQEAWDKVEDKYAVSSLAAAGFVGLWVSTGMVSAIDKLPLVPGVLEIVGIGYSGWFAYKN 146 Query: 124 LLFKPDREELFQIINKSVSDILG 146 L+FKPDRE L Q I + +I+G Sbjct: 147 LIFKPDREALIQKIKDTYKEIIG 169 BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs19327 (264 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Cs56792 (252 letters) Database: grape.as.orf 1588 sequences; 373,712 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Vv57457 196 3e-52 >Vv57457 Length = 115 Score = 196 bits (499), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 90/114 (78%), Positives = 102/114 (89%) Query: 138 IYIHNIHRSKHGSDSGTYDTEGRYTPVNLENMFSKYARTVPDKLTLGEVWNLTEGNRLAF 197 +YIHNIH+SKHGSDSGTYDTEGRY PVNLEN+FSKYA+TVP+KLTLGE+WN+TEGNR AF Sbjct: 1 MYIHNIHKSKHGSDSGTYDTEGRYMPVNLENIFSKYAQTVPEKLTLGELWNMTEGNRAAF 60 Query: 198 DLFGWVAAKLEWILLYILARDEEGLLSKEAVRRCFDGSLFEYCARMNLVGEDKM 251 D FG +A+KLEW LLY+LARDEEG LSKEAVRR FDGSLFEYCA+ + E KM Sbjct: 61 DFFGGIASKLEWGLLYVLARDEEGFLSKEAVRRVFDGSLFEYCAKAQMGYEGKM 114 Database: grape.as.orf Posted date: Mar 27, 2017 5:37 AM Number of letters in database: 373,712 Number of sequences in database: 1588 Lambda K H 0.318 0.138 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1588 Number of Hits to DB: 157,931,195 Number of extensions: 6482283 Number of successful extensions: 18360 Number of sequences better than 1.0e-10: 807 Number of HSP's gapped: 17389 Number of HSP's successfully gapped: 923 Length of database: 373,712 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 6.9 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (20.7 bits) S2: 135 (56.6 bits)