Program blastp blastx blastn Database Fungal Secretomes (pep) All Fungi (pep) Plant Secretomes (pep) All Plants (pep) Plant EST Secretomes (pep) All Plants ESTs (pep) [data from secretome analysis - not for alternative splicing] Human/Animal Secretome (pep) All Human/Animal (pep) Protist Secretome (pep) All Protist (pep) S02_bac (pep) YSU_bac (pep) B. distachyon ESTs (nt) Sacred lotus ESTs (nt) maize ESTs (nt) rice (indica) ESTs (nt) rice (japonica) ESTs (nt) sorghum ESTs (nt) pineapple ESTs (nt) apple ESTs (nt) grape ESTs (nt) orange ESTs (nt) strawberry ESTs (nt) maize ESTs (CMB2017 nt) cotton ESTs (nt) tomato transcripts (nt) Soybean transcripts (nt) Potato transcripts (nt) carmen_tran (nt) carmen_masked (nt) Nicrophorus_assembly (nt) Nicrophorus_cds (nt) Nicrophorus_mrna (nt) Nicrophorus_prot (pep) Nicro_hifi (nt)
Enter sequence below in FASTA format Or load it from disk
Set subsequence: From       To
Expect 0.00001 0.01 1 10 Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Perform ungapped alignment
Query Genetic Codes (blastx only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15)
Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 100 No OOF
Other advanced options:
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