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Species:

Ananas comosus (TPB 2016)

EST ID:

c85922_g1_i1 (View in GBrowse)

Function:

-

Full Length Predict:

Start Codon Status:

Strand and Stop Status:

-

-

-

Domain Search E-Value:

Domain / Pfam ID:

-

-

Frame:

Start:

End:

-1

1645

1908

PEP:

>c85922_g1_i1 MSFPEPSPTKLYSNSTTTTSNYNRKHSDFTTKDIKTVTLLTYNTIKQKRTFSKTSEKQEKTNTRDQIFELNSSISVSLHNPIQYDGNT

Sequence:

>c85922_g1_i1 agagagagagagagagggagggagctagaaggagtccgatcctcgaagcgagggcgatccacgcgattctcttctcaattttgtgtttttttttt ttctctgcgtcgttaccctttcccgagctcttcccactgtgagtattcgtctctttcgcttcgaatttgggtaaaaaacagttagggttaggttt tgttatcacgacgtagggggggttttagaatgtttaactgggagagccttattatcatcatctcaggtcgattttattttgtagtaggttgaatt cttgttgtttgagcttgttgctgtaaatttattgctttttatgtgtttccatcatattggatcggattatgaagcgagacggatattgaagagtt tagctcaaagatttgatctctagtattggttttttcctgcttttcagatgttttagaaaaggtcctcttttgtttaatagtgttgtatgttagta aagttacggtctttatgtctttagttgtaaaatctgagtgttttctattatagttagaggtggtagttgttgaattgctgtataattttgtaggg gacggttcaggaaagctcatgtaggcctagatcttttgattattctcatatattttactctttaattatgttcggaatcatctcattgatattgt acctatgccaattaaaatatgcttagaattctaataataagagtgaaaggttgcaactttgcaggttggatgtaatctcttctagcagaattgca tatgtttgatcaccccctctacatttctttcttctttcacttgctttttttttttcccccctttcagttttatgtcttgtgcacccctttttcct ctcgaaatacttgtctttctatgccacgaagttaattttcaactgcttcatatcaaaagagcgggcacttggggtataatctccattggttgcac gtcctttaggaaaaatcaactcaatgctaaagcaaatccatgtcattttttgggttgcagagccttcagtgctagaaagtgaaacaagcatcaaa gattctctcggccgcctgtccaatggaggtgtggagttataacttgtcggatggccttatcacagcgtttgggaatagtcattgttcctctgaga ctttgttcccttgcagctgttcatctgctcatctgctcatctgctttagcaagaatcttaactgcattatgaattgaagtgcatggcaacatagt ggattatagaatttataactgaactttgcagagcccttcatgttactgctgctgaaagaagctagcctggaagtgtaacagtaaatccttggatt ttaagagtatctgatgttatacattagtgtgcagcatgcgtcatatttcggtaaattattatctagaaaaatagaagacacaagcccataaggca gaagtcattaaagccaggtgtgatgaagcagaaatgccatttccctgtctattcatttgcacacactctagaagtccaacagaactttcggtgca aattgcgtgactgcattgattggcttgtctggcgcagatatacagtgatactacttatctgattgttctgcttgcatgtattgcaatgcttagac ccccgaacaggggttgcaagaaagctcacattctctcagttttggacaccattctgtggaattctggactgctcctttctagctcaacttcagac tttgacggtgcgcatagcaagaatttgaaatctatctggtagaagatctgtaccaagaatgtatgtttcaaggaatagaacccatcttgttatca cgaattatttctacagatctttgatatggtgaagtgtcatctgtgtcgacttgtggttcatgtgccaagtaaccagcaaaactgggactaaagtg aacatctactttttgatcccaagatatgaaggttccgagcaaaccttatttgtcggaatgctgatcagcctcatgaatcgcccgcagattttgac tgcttgaggtggtgtccgaggcgtgtatgatatttgtgcctgttaatctgattctgttttatggctgcttttcgcctccccatctttttaaccac taaacccaaatgcatttagtctggttacggaatggatggcgtttaacctgaatcattatttatagtagtgttgaatgtttgagacatttaacttt gtattagaactcgttgatgtacattgacgaaaagatagacgatctctct

Alignment:

View alignment

Alternative Splices:

Genome ID:

EST ID 1:

EST ID 2:

Start:

Stop:

Strand:

AS Code:

AS Type:

scaffold_2937

c85922_g1_i2

c85922_g1_i1

1760

3125

-

1^2-,0

intron retention

scaffold_2937

c85922_g1_i1

c85922_g1_i5

1113

1568

-

1^2-,0

intron retention

scaffold_2937

c85922_g1_i2

c85922_g1_i1

781

1113

-

1-2^,0

exon skipping

scaffold_2937

c85922_g1_i4

c85922_g1_i1

1760

4061

-

1^2-,3^4-

complex events

CDS / EST BLASTN:

Gene

e-Value

Identity

G Start

G End

E Start

E End

Aco031386.1 (View in GBrowse)

9e-75

100

1071

1212

369

510